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The map label for this gene is yqgE [C]

Identifier: 59711041

GI number: 59711041

Start: 461640

End: 462203

Strand: Reverse

Name: yqgE [C]

Synonym: VF_0434

Alternate gene names: 59711041

Gene position: 462203-461640 (Counterclockwise)

Preceding gene: 59711042

Following gene: 59711040

Centisome position: 15.95

GC content: 37.23

Gene sequence:

>564_bases
GTGAATTTAAAAAATCATTTTTTAGTTGCTATGCCTAGTATGAAAGATCCGTTCTTTCAACGAAGCGTTATTTATATTTG
TGAACATGATTCAGATGGAACCATGGGCTTACGTATCAATGAGCCTGTACAGATTTCATTAAAAGGAATGCTAGACCAAA
TAGAGCTAGATAACCCATCACCTATCATTTTCCCTCAAACATTAAGCCAACCAGTATTAAATGGTGGGCCGGTGTCGGAT
GATCGTGGTTTTGTTCTTCATTCAAATAAAGATAACTATTTATCAAGCATTCAAGTGACTGATGAGTTATCAGTAACAAC
CTCAAAAGATATTCTTGCTACATTAGGTACAGAATACCAGCCATATAAATATCTTGTTGCACTAGGATATTCTGGATGGG
AAGGTGGACAGCTTGAAAAAGAATTATCGGAGAATACATGGCTGACTTTAGAAGCAGATCCAAGCGTTATTTTCGATACT
CCTATTCCTGATCGTTGGCGTAAAGCATTACAACTACTGGGGATTAACCCTGCAAATTTATCAAGTGAGATTGGACACGC
ATGA

Upstream 100 bases:

>100_bases
TGTATTGAGGGGGCAACTCCTCAATATTAATACCAATTGGTTTATGCGTTATCTTTAGCGGTATTTACATTGGTATTAAT
CTCGCTTTCCGGGAGGCTCT

Downstream 100 bases:

>100_bases
GTTCACGCACCATTATGGCCTTTGATTTCGGAACCAAGAGTATTGGTTCTGCGATTGGACAAGAAATCACAGGAACAGCA
AGTCCACTAAAAGCATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNLKNHFLVAMPSMKDPFFQRSVIYICEHDSDGTMGLRINEPVQISLKGMLDQIELDNPSPIIFPQTLSQPVLNGGPVSD
DRGFVLHSNKDNYLSSIQVTDELSVTTSKDILATLGTEYQPYKYLVALGYSGWEGGQLEKELSENTWLTLEADPSVIFDT
PIPDRWRKALQLLGINPANLSSEIGHA

Sequences:

>Translated_187_residues
MNLKNHFLVAMPSMKDPFFQRSVIYICEHDSDGTMGLRINEPVQISLKGMLDQIELDNPSPIIFPQTLSQPVLNGGPVSD
DRGFVLHSNKDNYLSSIQVTDELSVTTSKDILATLGTEYQPYKYLVALGYSGWEGGQLEKELSENTWLTLEADPSVIFDT
PIPDRWRKALQLLGINPANLSSEIGHA
>Mature_187_residues
MNLKNHFLVAMPSMKDPFFQRSVIYICEHDSDGTMGLRINEPVQISLKGMLDQIELDNPSPIIFPQTLSQPVLNGGPVSD
DRGFVLHSNKDNYLSSIQVTDELSVTTSKDILATLGTEYQPYKYLVALGYSGWEGGQLEKELSENTWLTLEADPSVIFDT
PIPDRWRKALQLLGINPANLSSEIGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=188, Percent_Identity=47.8723404255319, Blast_Score=204, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y434_VIBF1 (Q5E7R7)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_203817.1
- HSSP:   Q9KUP8
- ProteinModelPortal:   Q5E7R7
- SMR:   Q5E7R7
- STRING:   Q5E7R7
- GeneID:   3277314
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_0434
- NMPDR:   fig|312309.3.peg.434
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- PhylomeDB:   Q5E7R7
- ProtClustDB:   PRK00228
- BioCyc:   VFIS312309:VF0434-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20822; Mature: 20822

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKNHFLVAMPSMKDPFFQRSVIYICEHDSDGTMGLRINEPVQISLKGMLDQIELDNPS
CCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCEEEEECCCCC
PIIFPQTLSQPVLNGGPVSDDRGFVLHSNKDNYLSSIQVTDELSVTTSKDILATLGTEYQ
CEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCEEEECCHHHHHHHCCCCC
PYKYLVALGYSGWEGGQLEKELSENTWLTLEADPSVIFDTPIPDRWRKALQLLGINPANL
CEEEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCC
SSEIGHA
CHHCCCC
>Mature Secondary Structure
MNLKNHFLVAMPSMKDPFFQRSVIYICEHDSDGTMGLRINEPVQISLKGMLDQIELDNPS
CCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCEEEEECCCCC
PIIFPQTLSQPVLNGGPVSDDRGFVLHSNKDNYLSSIQVTDELSVTTSKDILATLGTEYQ
CEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCEEEECCHHHHHHHCCCCC
PYKYLVALGYSGWEGGQLEKELSENTWLTLEADPSVIFDTPIPDRWRKALQLLGINPANL
CEEEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCC
SSEIGHA
CHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA