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The map label for this gene is yggT [C]

Identifier: 59711035

GI number: 59711035

Start: 456699

End: 457253

Strand: Reverse

Name: yggT [C]

Synonym: VF_0428

Alternate gene names: 59711035

Gene position: 457253-456699 (Counterclockwise)

Preceding gene: 59711036

Following gene: 59711034

Centisome position: 15.78

GC content: 39.82

Gene sequence:

>555_bases
ATGAATGCAATGAGCTTTTTAATCTCAACCGTTTTTGATCTATACATCATGGTCGTGATTTTACGTATCTGGTTACAAAT
GGCGCGAGCGGATTTCTATAACCCATTCTCACAATTTATTGTTAAAGCAACTCAACCGATCGTATCTCCTCTACGTCGAG
TGATCCCATCCATCGGTAGCTTAGATCTAGCAACAGTACTATTCGCTTATGTATTGTGTGTATTTAAATTTGTTGCGCTA
CAACTTGTAGTTTCTGGTGGCGTCGCATTTGGCCCTGAGTTCTTATTTATCGGTTTAATCGCACTTGCTAAAGCGGCTGG
TGGTTTACTGTTCTGGATCTTATTAGTTCGTGCAATTTTAAGCTGGGTGAGCCAAGGTCGTAGCCCAATTGAATACGTAA
TGCACCAATTAACAGAACCTATGCTTGCTCCAATCCGTAAGATCTTACCTCAAATGGGTGGGCTGGATTTAAGTGTATTA
GTGTTATTTATTGTTCTTCAATTTGCTAACTTCTTAATGGGCGATTTAATTGGCCCAATCTGGTATAGCTTGTAA

Upstream 100 bases:

>100_bases
AGCAATGCAAGCTGCCGTTTCTCGCGCAGAAGAAATGGAATCTTTATTTTAAGATTCATAAAGCTAACTAAATTCTGATA
TTTCTAAGGTTAAACATACT

Downstream 100 bases:

>100_bases
TCTCGCTATGCCAGTTAAATATGATAAAGACGATCTGATCTTACGACTGTATTTACAACCTAAAGCCAGTCGTGATCAGA
TAGTTGGAATACACGGTGAA

Product: inner membrane protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNAMSFLISTVFDLYIMVVILRIWLQMARADFYNPFSQFIVKATQPIVSPLRRVIPSIGSLDLATVLFAYVLCVFKFVAL
QLVVSGGVAFGPEFLFIGLIALAKAAGGLLFWILLVRAILSWVSQGRSPIEYVMHQLTEPMLAPIRKILPQMGGLDLSVL
VLFIVLQFANFLMGDLIGPIWYSL

Sequences:

>Translated_184_residues
MNAMSFLISTVFDLYIMVVILRIWLQMARADFYNPFSQFIVKATQPIVSPLRRVIPSIGSLDLATVLFAYVLCVFKFVAL
QLVVSGGVAFGPEFLFIGLIALAKAAGGLLFWILLVRAILSWVSQGRSPIEYVMHQLTEPMLAPIRKILPQMGGLDLSVL
VLFIVLQFANFLMGDLIGPIWYSL
>Mature_184_residues
MNAMSFLISTVFDLYIMVVILRIWLQMARADFYNPFSQFIVKATQPIVSPLRRVIPSIGSLDLATVLFAYVLCVFKFVAL
QLVVSGGVAFGPEFLFIGLIALAKAAGGLLFWILLVRAILSWVSQGRSPIEYVMHQLTEPMLAPIRKILPQMGGLDLSVL
VLFIVLQFANFLMGDLIGPIWYSL

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=170, Percent_Identity=55.8823529411765, Blast_Score=188, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 20499; Mature: 20499

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAMSFLISTVFDLYIMVVILRIWLQMARADFYNPFSQFIVKATQPIVSPLRRVIPSIGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LDLATVLFAYVLCVFKFVALQLVVSGGVAFGPEFLFIGLIALAKAAGGLLFWILLVRAIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVSQGRSPIEYVMHQLTEPMLAPIRKILPQMGGLDLSVLVLFIVLQFANFLMGDLIGPI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WYSL
HHCC
>Mature Secondary Structure
MNAMSFLISTVFDLYIMVVILRIWLQMARADFYNPFSQFIVKATQPIVSPLRRVIPSIGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LDLATVLFAYVLCVFKFVALQLVVSGGVAFGPEFLFIGLIALAKAAGGLLFWILLVRAIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVSQGRSPIEYVMHQLTEPMLAPIRKILPQMGGLDLSVLVLFIVLQFANFLMGDLIGPI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WYSL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8982386 [H]