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The map label for this gene is yggU [C]

Identifier: 59711034

GI number: 59711034

Start: 456404

End: 456691

Strand: Reverse

Name: yggU [C]

Synonym: VF_0427

Alternate gene names: 59711034

Gene position: 456691-456404 (Counterclockwise)

Preceding gene: 59711035

Following gene: 59711033

Centisome position: 15.76

GC content: 37.5

Gene sequence:

>288_bases
ATGCCAGTTAAATATGATAAAGACGATCTGATCTTACGACTGTATTTACAACCTAAAGCCAGTCGTGATCAGATAGTTGG
AATACACGGTGAAGAGTTAAAAATTGCTATTACTGCTCCTCCTGTTGATGGGAAAGCGAATGCGCATTTAATTAAATACT
TCTCCAAGTTATTCAAAGTCGCTAAAGGAAAAATTACGGTAGAAAAAGGCGAACTAAATCGACACAAACAAGTTCGAATT
CACTCCCCTGAGCTCATACCGAATGAAATCCAACAGCTGTTAGTATAA

Upstream 100 bases:

>100_bases
CTGGATTTAAGTGTATTAGTGTTATTTATTGTTCTTCAATTTGCTAACTTCTTAATGGGCGATTTAATTGGCCCAATCTG
GTATAGCTTGTAATCTCGCT

Downstream 100 bases:

>100_bases
AAATAACGATTAATGCCGAGTTAACCCTCGGCTTTTTTATATGGAAGCCATTTTTATAAGGAAAGTAATATGAAAAAAAC
GCTATTACTGTTGTCACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MPVKYDKDDLILRLYLQPKASRDQIVGIHGEELKIAITAPPVDGKANAHLIKYFSKLFKVAKGKITVEKGELNRHKQVRI
HSPELIPNEIQQLLV

Sequences:

>Translated_95_residues
MPVKYDKDDLILRLYLQPKASRDQIVGIHGEELKIAITAPPVDGKANAHLIKYFSKLFKVAKGKITVEKGELNRHKQVRI
HSPELIPNEIQQLLV
>Mature_94_residues
PVKYDKDDLILRLYLQPKASRDQIVGIHGEELKIAITAPPVDGKANAHLIKYFSKLFKVAKGKITVEKGELNRHKQVRIH
SPELIPNEIQQLLV

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=92, Percent_Identity=60.8695652173913, Blast_Score=126, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 10806; Mature: 10675

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKYDKDDLILRLYLQPKASRDQIVGIHGEELKIAITAPPVDGKANAHLIKYFSKLFKV
CCCCCCCCCEEEEEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
AKGKITVEKGELNRHKQVRIHSPELIPNEIQQLLV
HCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure 
PVKYDKDDLILRLYLQPKASRDQIVGIHGEELKIAITAPPVDGKANAHLIKYFSKLFKV
CCCCCCCCEEEEEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
AKGKITVEKGELNRHKQVRIHSPELIPNEIQQLLV
HCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA