| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is sagP [H]
Identifier: 59711015
GI number: 59711015
Start: 436516
End: 437736
Strand: Reverse
Name: sagP [H]
Synonym: VF_0408
Alternate gene names: 59711015
Gene position: 437736-436516 (Counterclockwise)
Preceding gene: 59711018
Following gene: 59711014
Centisome position: 15.11
GC content: 38.74
Gene sequence:
>1221_bases ATGAATAAATTATTTGTTGGCTCTGAAATTGGTCAACTACGCCGTGTTATTCTTCATCGTCCTGAACGAGCACTCAGTCA TTTAACTCCAACTAATTGTCACAACTTACTTTTTGATGATGTGCTATCAGTAGAAAAAGCCCTTTTAGAACACGATCAAT TTGTTAAAACCTTGGAAAACCAAGACGTCGATGTACTCTTACTTCAAGATTTATTAGAACAAACATTAGAAAACCCAGAA GCAAAAGAGTGGCTTCTTAAACATCAAATCTCACACTATCGATTCGGTCCTACTTTCGCCAATCAAATCCGAGTTTTCTT ACTTGAGCACAGTAATAAAGAATTAGCTTCTATTTTATTGGGAGGTTTAGCTTTCATTGAACTTCCGTTTAAAGCACCTT CTATGCTTCAACAATTAAGTGATCCATTTGATTTTGTCATCGCCCCATTACCAAATCATTTGTTTACTCGCGACACCTCA TGTTGGATTTATGGTGGTGTATCAATTAACCCTATGGCGAAGGCTGCTCGTAAAAGAGAATCAAACCATTTAAGAGCCAT CTATCGTTGGCATCCACTTTTTTCTCATCACGATTTTGCTCGTTATTTTGAAGATGAAAACCGTTATTACGATAATGCGA CCATTGAAGGGGGGGATGTTTTAGTTATTGGCAAAGGCAATGTATTAGTCGGTATCTCTGAACGCACGACTCCTCAAGGC ATTGAAAACTTGGCCAAGCAACTGTTTAGAACCCATCAAGCAAAACAAGTCATTGCTATTAAATTACCCGAAGACCGTTC ATGCATGCATCTAGATACAGTAATGACGCATATGGATCACAACGTCTTTTCTGTTTATCCAAGAGTCATTGATAAAAATA TGGGGTGCTGGTCAATCACCCCTTGTGGAGAGCAGCATTTAGATATTAAAGAAATGCCTAACTTCCAAAATGTATTAATG TCAGCATTAGAATTAGATAACTTAAATATTATTACCACCGGTGGGGATAGCTATGAAGCTGAGCGTGAACAATGGCACGA TGCAAATAATGTTTTAACCATTAAACCCGGTGTTGTGGTTGCTTATGAACGAAACACCTATACCAATGAGAAATACGACA AAGCAGGTATTCATGTCCTTCCGATTACCGGTGATGAGTTAGGGCGAGGTCGTGGAGGCGCTAGGTGCATGAGTTGTCCA ATAGAAAGAGACGGTATTTAA
Upstream 100 bases:
>100_bases TGTACTAAGCAAATCCCCTAGCACTTCAATAAGTAAAGAAAAATTAACATCTATACGGTATGATAGCGGTGTAACAAAAA TATTAAAAGAAAGGAATCTT
Downstream 100 bases:
>100_bases CTCTCAACAAAAAACATATACACATTAAATAAATCAAAATAAATATTCACAACTAATGAATTTTTATGTATAACTATAAA TCACTGGATTGATTTTTGGC
Product: arginine deiminase
Products: NA
Alternate protein names: ADI; Arginine dihydrolase; AD [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNKLFVGSEIGQLRRVILHRPERALSHLTPTNCHNLLFDDVLSVEKALLEHDQFVKTLENQDVDVLLLQDLLEQTLENPE AKEWLLKHQISHYRFGPTFANQIRVFLLEHSNKELASILLGGLAFIELPFKAPSMLQQLSDPFDFVIAPLPNHLFTRDTS CWIYGGVSINPMAKAARKRESNHLRAIYRWHPLFSHHDFARYFEDENRYYDNATIEGGDVLVIGKGNVLVGISERTTPQG IENLAKQLFRTHQAKQVIAIKLPEDRSCMHLDTVMTHMDHNVFSVYPRVIDKNMGCWSITPCGEQHLDIKEMPNFQNVLM SALELDNLNIITTGGDSYEAEREQWHDANNVLTIKPGVVVAYERNTYTNEKYDKAGIHVLPITGDELGRGRGGARCMSCP IERDGI
Sequences:
>Translated_406_residues MNKLFVGSEIGQLRRVILHRPERALSHLTPTNCHNLLFDDVLSVEKALLEHDQFVKTLENQDVDVLLLQDLLEQTLENPE AKEWLLKHQISHYRFGPTFANQIRVFLLEHSNKELASILLGGLAFIELPFKAPSMLQQLSDPFDFVIAPLPNHLFTRDTS CWIYGGVSINPMAKAARKRESNHLRAIYRWHPLFSHHDFARYFEDENRYYDNATIEGGDVLVIGKGNVLVGISERTTPQG IENLAKQLFRTHQAKQVIAIKLPEDRSCMHLDTVMTHMDHNVFSVYPRVIDKNMGCWSITPCGEQHLDIKEMPNFQNVLM SALELDNLNIITTGGDSYEAEREQWHDANNVLTIKPGVVVAYERNTYTNEKYDKAGIHVLPITGDELGRGRGGARCMSCP IERDGI >Mature_406_residues MNKLFVGSEIGQLRRVILHRPERALSHLTPTNCHNLLFDDVLSVEKALLEHDQFVKTLENQDVDVLLLQDLLEQTLENPE AKEWLLKHQISHYRFGPTFANQIRVFLLEHSNKELASILLGGLAFIELPFKAPSMLQQLSDPFDFVIAPLPNHLFTRDTS CWIYGGVSINPMAKAARKRESNHLRAIYRWHPLFSHHDFARYFEDENRYYDNATIEGGDVLVIGKGNVLVGISERTTPQG IENLAKQLFRTHQAKQVIAIKLPEDRSCMHLDTVMTHMDHNVFSVYPRVIDKNMGCWSITPCGEQHLDIKEMPNFQNVLM SALELDNLNIITTGGDSYEAEREQWHDANNVLTIKPGVVVAYERNTYTNEKYDKAGIHVLPITGDELGRGRGGARCMSCP IERDGI
Specific function: Unknown
COG id: COG2235
COG function: function code E; Arginine deiminase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003198 - InterPro: IPR003876 [H]
Pfam domain/function: PF02274 Amidinotransf [H]
EC number: =3.5.3.6 [H]
Molecular weight: Translated: 46289; Mature: 46289
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLFVGSEIGQLRRVILHRPERALSHLTPTNCHNLLFDDVLSVEKALLEHDQFVKTLEN CCCEECCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC QDVDVLLLQDLLEQTLENPEAKEWLLKHQISHYRFGPTFANQIRVFLLEHSNKELASILL CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCHHCCEEEEEEECCCHHHHHHHH GGLAFIELPFKAPSMLQQLSDPFDFVIAPLPNHLFTRDTSCWIYGGVSINPMAKAARKRE HHHHEEEECCCCHHHHHHHCCCCEEEEECCCCHHHCCCCCEEEEECCEECHHHHHHHHHC SNHLRAIYRWHPLFSHHDFARYFEDENRYYDNATIEGGDVLVIGKGNVLVGISERTTPQG CCCEEEEEEECCCCCCCHHHHHHCCCCCEECCCEECCCCEEEEECCCEEEEECCCCCHHH IENLAKQLFRTHQAKQVIAIKLPEDRSCMHLDTVMTHMDHNVFSVYPRVIDKNMGCWSIT HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEC PCGEQHLDIKEMPNFQNVLMSALELDNLNIITTGGDSYEAEREQWHDANNVLTIKPGVVV CCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCCEEE AYERNTYTNEKYDKAGIHVLPITGDELGRGRGGARCMSCPIERDGI EEECCCCCCCCCCCCCCEEEEECCCHHCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MNKLFVGSEIGQLRRVILHRPERALSHLTPTNCHNLLFDDVLSVEKALLEHDQFVKTLEN CCCEECCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC QDVDVLLLQDLLEQTLENPEAKEWLLKHQISHYRFGPTFANQIRVFLLEHSNKELASILL CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCHHCCEEEEEEECCCHHHHHHHH GGLAFIELPFKAPSMLQQLSDPFDFVIAPLPNHLFTRDTSCWIYGGVSINPMAKAARKRE HHHHEEEECCCCHHHHHHHCCCCEEEEECCCCHHHCCCCCEEEEECCEECHHHHHHHHHC SNHLRAIYRWHPLFSHHDFARYFEDENRYYDNATIEGGDVLVIGKGNVLVGISERTTPQG CCCEEEEEEECCCCCCCHHHHHHCCCCCEECCCEECCCCEEEEECCCEEEEECCCCCHHH IENLAKQLFRTHQAKQVIAIKLPEDRSCMHLDTVMTHMDHNVFSVYPRVIDKNMGCWSIT HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEC PCGEQHLDIKEMPNFQNVLMSALELDNLNIITTGGDSYEAEREQWHDANNVLTIKPGVVV CCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCCEEE AYERNTYTNEKYDKAGIHVLPITGDELGRGRGGARCMSCPIERDGI EEECCCCCCCCCCCCCCEEEEECCCHHCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA