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The map label for this gene is mshB

Identifier: 59710972

GI number: 59710972

Start: 397686

End: 398249

Strand: Direct

Name: mshB

Synonym: VF_0365

Alternate gene names: NA

Gene position: 397686-398249 (Clockwise)

Preceding gene: 59710971

Following gene: 59710973

Centisome position: 13.72

GC content: 41.13

Gene sequence:

>564_bases
ATGAAGACACAAAAAGGTTTCTCACTGGTTGAGCTAGTGATTGTAATTGTTGTAATTGGTCTATTAGCTACAGTGGCATT
ACCTCGTTTTTTAGATGTCAGTCTTGAGGCGAAAAAAGCAAGTATTGAAGGTGTCGCAGGTGGCTATGCCACGGCTGTTC
TTTCTGCAAGAGCACAATGGGAAGCGGAAGCTCGACCAAAAACCGACGGTTACAATGCGGTTAGCTATGATGGTACTGAA
TTTTGGCTAACGGATCCTTCTCAAGCAAATCAAGCAAACTACCGTCCAGGTTATCCAATTGCACCACGAGAAGATTTAGA
TGGTAATGATACGGGGAGCTACCCAGCATCACTAACATCAAAAGAGTGTATTTTACTGATGGAAATGCTGTTACAGAATG
CACCGCATGTGACTGACGATAAAAATGATAATGAAGGTAAATATCTTGCTGAAGTGATCAGTGAGAATGGCCGTAGTCAA
TGTAAATACACACAACAAGAAAATGAAGGTCACTTTTTTACTTACGAGCCTGAATCAGGTCGTGTTGTTGTGACATTACA
ATAA

Upstream 100 bases:

>100_bases
TAGAAAAAAAATAAGTGGCAAATTTTTGACGAACGCCGTATTTTTTTTTGTATAATCCCTTACAATTCATGGAAAAATTA
AGATAGAGAGAAGCAGTACA

Downstream 100 bases:

>100_bases
GTAATTTAAGCGCCAGTAGATGAGCTAGGATAGCGATGTGCGGGTGAATAAATCTGTTTTAACTGATGGCGTTTTGACAG
TTTGCGTTAATAATTTTTTG

Product: MSHA pilin protein MshB

Products: NA

Alternate protein names: Msha Pilin Protein Mshb; Pilin Protein; Prepilin-Type Cleavage/Methylation; Type IV Pilus Prepilin-Like Protein

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKTQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASIEGVAGGYATAVLSARAQWEAEARPKTDGYNAVSYDGTE
FWLTDPSQANQANYRPGYPIAPREDLDGNDTGSYPASLTSKECILLMEMLLQNAPHVTDDKNDNEGKYLAEVISENGRSQ
CKYTQQENEGHFFTYEPESGRVVVTLQ

Sequences:

>Translated_187_residues
MKTQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASIEGVAGGYATAVLSARAQWEAEARPKTDGYNAVSYDGTE
FWLTDPSQANQANYRPGYPIAPREDLDGNDTGSYPASLTSKECILLMEMLLQNAPHVTDDKNDNEGKYLAEVISENGRSQ
CKYTQQENEGHFFTYEPESGRVVVTLQ
>Mature_187_residues
MKTQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASIEGVAGGYATAVLSARAQWEAEARPKTDGYNAVSYDGTE
FWLTDPSQANQANYRPGYPIAPREDLDGNDTGSYPASLTSKECILLMEMLLQNAPHVTDDKNDNEGKYLAEVISENGRSQ
CKYTQQENEGHFFTYEPESGRVVVTLQ

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20526; Mature: 20526

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASIEGVAGGYATAVLSARAQW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHC
EAEARPKTDGYNAVSYDGTEFWLTDPSQANQANYRPGYPIAPREDLDGNDTGSYPASLTS
CCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
KECILLMEMLLQNAPHVTDDKNDNEGKYLAEVISENGRSQCKYTQQENEGHFFTYEPESG
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC
RVVVTLQ
EEEEEEC
>Mature Secondary Structure
MKTQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASIEGVAGGYATAVLSARAQW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHC
EAEARPKTDGYNAVSYDGTEFWLTDPSQANQANYRPGYPIAPREDLDGNDTGSYPASLTS
CCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
KECILLMEMLLQNAPHVTDDKNDNEGKYLAEVISENGRSQCKYTQQENEGHFFTYEPESG
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC
RVVVTLQ
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA