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The map label for this gene is mshA

Identifier: 59710973

GI number: 59710973

Start: 398415

End: 398879

Strand: Direct

Name: mshA

Synonym: VF_0366

Alternate gene names: NA

Gene position: 398415-398879 (Clockwise)

Preceding gene: 59710972

Following gene: 59710974

Centisome position: 13.75

GC content: 40.86

Gene sequence:

>465_bases
ATGAAAAGACAAGGTGGTTTCACCCTTATCGAGTTAGTGGTTGTTATCGTGATTTTAGGTATTCTTGCAGTAACTGCAGC
ACCTAAATTCTTAAACCTGCAATCTGATGCGCGTGCATCATCTCTGCAAGGTCTAAAAGGTGCAATGGCTGGTGCAGCTG
GTATCGTTTATGGTAAAGCCGCGATTGATGGTAAAGAAACAGCTTCAACAGAAACTGATGTTGATGGTATTGCTACAAAA
TACGGTTATCCAATGGCTAAAGATACAGGTATTGCTGAAGCGGTAGTTGGTCTATCTGAAGACTGGAGCAGTGCTACATC
AGGTGCTACAATTTTAGTTGTTGGCTTTAAATCAGATAACGCAACTGCAGCATCAATTGTTGCAACTAACTGTTTTGTTA
CATACGGAGAAGCAACAACTGTATCTTCTGGCGTATCAACAATCGTTACTGATACTGGTTGTTAA

Upstream 100 bases:

>100_bases
ATGGCGTTTTGACAGTTTGCGTTAATAATTTTTTGGGTTTTAACAATAATGATGGCACTGGTTTGGTGCTATCGATTTTA
TAATAAAAGAGAGAAGTAAC

Downstream 100 bases:

>100_bases
TCTAATTCAACCTCTTTAGTTAAAAACCAGCGATCTCCGCTGGTTTTTTTGTATCTAAAAATAACAAACCATTCGCTATA
TCTATAATTTCCGTTATCCT

Product: MSHA pilin protein MshA

Products: NA

Alternate protein names: Methylation Site Containing Protein; Type IV Pilus Mannose-Sensitive Hemagglutinin A; MshA Mannose-Sensitive Haemaglutinin; Type II Secretory Pathway Pseudopilin; MAnnose-Sensitive Hemagglutinin A; Mannose-Sensitive Agglutinin; V10 Pilin; Prepilin-Type Cleavage/Methylation; Msha Pilin Protein Msha; Methylation; Mannose-Sensitive Hemagglutinin A

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKRQGGFTLIELVVVIVILGILAVTAAPKFLNLQSDARASSLQGLKGAMAGAAGIVYGKAAIDGKETASTETDVDGIATK
YGYPMAKDTGIAEAVVGLSEDWSSATSGATILVVGFKSDNATAASIVATNCFVTYGEATTVSSGVSTIVTDTGC

Sequences:

>Translated_154_residues
MKRQGGFTLIELVVVIVILGILAVTAAPKFLNLQSDARASSLQGLKGAMAGAAGIVYGKAAIDGKETASTETDVDGIATK
YGYPMAKDTGIAEAVVGLSEDWSSATSGATILVVGFKSDNATAASIVATNCFVTYGEATTVSSGVSTIVTDTGC
>Mature_154_residues
MKRQGGFTLIELVVVIVILGILAVTAAPKFLNLQSDARASSLQGLKGAMAGAAGIVYGKAAIDGKETASTETDVDGIATK
YGYPMAKDTGIAEAVVGLSEDWSSATSGATILVVGFKSDNATAASIVATNCFVTYGEATTVSSGVSTIVTDTGC

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15475; Mature: 15475

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQGGFTLIELVVVIVILGILAVTAAPKFLNLQSDARASSLQGLKGAMAGAAGIVYGKA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
AIDGKETASTETDVDGIATKYGYPMAKDTGIAEAVVGLSEDWSSATSGATILVVGFKSDN
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
ATAASIVATNCFVTYGEATTVSSGVSTIVTDTGC
CCCHHEEEEEEEEEECCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MKRQGGFTLIELVVVIVILGILAVTAAPKFLNLQSDARASSLQGLKGAMAGAAGIVYGKA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
AIDGKETASTETDVDGIATKYGYPMAKDTGIAEAVVGLSEDWSSATSGATILVVGFKSDN
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
ATAASIVATNCFVTYGEATTVSSGVSTIVTDTGC
CCCHHEEEEEEEEEECCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA