| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59710953
Identifier: 59710953
GI number: 59710953
Start: 375108
End: 376106
Strand: Reverse
Name: 59710953
Synonym: VF_0346
Alternate gene names: NA
Gene position: 376106-375108 (Counterclockwise)
Preceding gene: 59710954
Following gene: 59710952
Centisome position: 12.98
GC content: 38.04
Gene sequence:
>999_bases ATGACTAAACTTCCATTTATCTCAGTCATTATCAAGACTTATAATGAAGAAGCAGGCATAGAGAAAACTATCTCCAGCAT CAAAAAAAATATGGGGGTATACCCTCATAAAATTATTGTTGCTGATAGTTTGTCTACCGACAACACTCAAGATATCGCCA CAAAAATGGACGTAACGGTTGTTTCTCTTACTGAGCCAGAAGATCGTTGCTGCGGTGTCGGACATCAGCTTGGTTACCTT TATAGTGAAGGCGATTTCCTGCTACTTCTTGATGGTGATATGGAACTGGAATCAGGGTTTATTGAACAAGGTGTATCCTT CTTACTTGAGAACCCTCAATATGCAGGCGTTGCGGGCTCTGTAGAAATGGATGATGTTGATAGTTATGAGTTTAAATCTC GCAAACAGCGTCTTCATCAAATTTATCCTATTGGTGATTGCTCACATTTAGGTGGCGGAGGCCTTTATCGAAAAACGGCC ATTGATGAAATTGACTATTTAACCAATCGTAACCTTCATGCTTACGAAGAATCAGAATTAGGAATGCGTTTAACTCACGC AGGGTATAAATTACATCGTCTTGATGTTCCTTATTTTTTCCATACATCCTACACCATGTCGTCATTAGCATTAATGAAAC ATCGCTGGAAAGGCGGCTACCTTTTTGCTCCTGGAGAATTAGTGAAAGGCGCTTTTGGAACGCCATTATTTTCACACGCC CTAAAAACCATTAAGAATGAAGCTATCTTTGCTGTCTATTTATTCATTTTATTCGCTTCATTACTTTCATTTAATCCAAT ATTAATTGGAGCGACTTCCTTACCTCTATTCGCTTTCATCGGATTAAAAACAATAAAAAATCGTTCTATTAGAGATGCCC TTCAAAGCGTATTAAATCTTTCAGTCTTTGCGGCAGGCTTAATTAAAGGGCTATTTATTCCTTTAAAAGATCCAAAAACA CCACCACCACATACCGTTATTAACGAGGGTAAAAAATGA
Upstream 100 bases:
>100_bases CAAATATTGATGCTTGTTCCCATGCTTCAATTTCTTTTTTACTTATCATTAGGCTCAAACCTAGTGATCCGAAAATCACT GATCACGGCGGCAGAAAACC
Downstream 100 bases:
>100_bases AAATTCTATTAGTTAATAAATTCTTTTTTATGAAAGGTGGCGCAGAAACGGTTTACTTCCAAGAGCGAGATATGCTCCTT TCTGAAGGAGTAAAGATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase Protein; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; Glycosyltransferase Family 2 Domain Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTKLPFISVIIKTYNEEAGIEKTISSIKKNMGVYPHKIIVADSLSTDNTQDIATKMDVTVVSLTEPEDRCCGVGHQLGYL YSEGDFLLLLDGDMELESGFIEQGVSFLLENPQYAGVAGSVEMDDVDSYEFKSRKQRLHQIYPIGDCSHLGGGGLYRKTA IDEIDYLTNRNLHAYEESELGMRLTHAGYKLHRLDVPYFFHTSYTMSSLALMKHRWKGGYLFAPGELVKGAFGTPLFSHA LKTIKNEAIFAVYLFILFASLLSFNPILIGATSLPLFAFIGLKTIKNRSIRDALQSVLNLSVFAAGLIKGLFIPLKDPKT PPPHTVINEGKK
Sequences:
>Translated_332_residues MTKLPFISVIIKTYNEEAGIEKTISSIKKNMGVYPHKIIVADSLSTDNTQDIATKMDVTVVSLTEPEDRCCGVGHQLGYL YSEGDFLLLLDGDMELESGFIEQGVSFLLENPQYAGVAGSVEMDDVDSYEFKSRKQRLHQIYPIGDCSHLGGGGLYRKTA IDEIDYLTNRNLHAYEESELGMRLTHAGYKLHRLDVPYFFHTSYTMSSLALMKHRWKGGYLFAPGELVKGAFGTPLFSHA LKTIKNEAIFAVYLFILFASLLSFNPILIGATSLPLFAFIGLKTIKNRSIRDALQSVLNLSVFAAGLIKGLFIPLKDPKT PPPHTVINEGKK >Mature_331_residues TKLPFISVIIKTYNEEAGIEKTISSIKKNMGVYPHKIIVADSLSTDNTQDIATKMDVTVVSLTEPEDRCCGVGHQLGYLY SEGDFLLLLDGDMELESGFIEQGVSFLLENPQYAGVAGSVEMDDVDSYEFKSRKQRLHQIYPIGDCSHLGGGGLYRKTAI DEIDYLTNRNLHAYEESELGMRLTHAGYKLHRLDVPYFFHTSYTMSSLALMKHRWKGGYLFAPGELVKGAFGTPLFSHAL KTIKNEAIFAVYLFILFASLLSFNPILIGATSLPLFAFIGLKTIKNRSIRDALQSVLNLSVFAAGLIKGLFIPLKDPKTP PPHTVINEGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36881; Mature: 36750
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLPFISVIIKTYNEEAGIEKTISSIKKNMGVYPHKIIVADSLSTDNTQDIATKMDVTV CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHEEEEEE VSLTEPEDRCCGVGHQLGYLYSEGDFLLLLDGDMELESGFIEQGVSFLLENPQYAGVAGS EEECCCCHHHHCCCHHHCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCC VEMDDVDSYEFKSRKQRLHQIYPIGDCSHLGGGGLYRKTAIDEIDYLTNRNLHAYEESEL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC GMRLTHAGYKLHRLDVPYFFHTSYTMSSLALMKHRWKGGYLFAPGELVKGAFGTPLFSHA CEEEECCCCEEEEECCCEEEECHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCCHHHHHH LKTIKNEAIFAVYLFILFASLLSFNPILIGATSLPLFAFIGLKTIKNRSIRDALQSVLNL HHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHH SVFAAGLIKGLFIPLKDPKTPPPHTVINEGKK HHHHHHHHHHEEEECCCCCCCCCCHHHCCCCC >Mature Secondary Structure TKLPFISVIIKTYNEEAGIEKTISSIKKNMGVYPHKIIVADSLSTDNTQDIATKMDVTV CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHEEEEEE VSLTEPEDRCCGVGHQLGYLYSEGDFLLLLDGDMELESGFIEQGVSFLLENPQYAGVAGS EEECCCCHHHHCCCHHHCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCC VEMDDVDSYEFKSRKQRLHQIYPIGDCSHLGGGGLYRKTAIDEIDYLTNRNLHAYEESEL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC GMRLTHAGYKLHRLDVPYFFHTSYTMSSLALMKHRWKGGYLFAPGELVKGAFGTPLFSHA CEEEECCCCEEEEECCCEEEECHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCCHHHHHH LKTIKNEAIFAVYLFILFASLLSFNPILIGATSLPLFAFIGLKTIKNRSIRDALQSVLNL HHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHH SVFAAGLIKGLFIPLKDPKTPPPHTVINEGKK HHHHHHHHHHEEEECCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA