| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59710931
Identifier: 59710931
GI number: 59710931
Start: 334347
End: 335282
Strand: Reverse
Name: 59710931
Synonym: VF_0324
Alternate gene names: NA
Gene position: 335282-334347 (Counterclockwise)
Preceding gene: 59710932
Following gene: 59710926
Centisome position: 11.57
GC content: 38.14
Gene sequence:
>936_bases ATGGGAAATCATGTTAAATCGAAGCTAGGCGAACTCATGAATACGCAGCAAACTATCATCACTAAAGATGAAACAACTAA AAAAGAACAACCAACTCATAAAAAAGAACATTATGTAGTTAGCAGCGCTAGACGACTAAAAGAAATTGCAATTCAGCAAG GTCTTGCGGCCAATCTTCAGCCTCCAAAGCCAGAAGAAACACTGCTTAAACGTGCGTTATATCGTGAGAAATTATTGCGT GAACAACAACAACAAAATTTAGAAAAAATCGTAAAACTCGCTCACGATTATTGCAATGATGAAACCGCAGGCGACCCAGA TCCTGATTGGCTACATCGTTTCTTTGAAATGGCAAAAGATATCCACGACTCATCAATGCAAAAACTGTGGAGCCAAATAT TCAAACAAGAAGTGATTAGCCCTGGTTCCACTTCAATGAAAGCCCTTAAAGTTCTAAAAGACATGACCCAACGCGAAGCT CAAACATTTCAAAGAGCAGCTTCACTCGCATGTAGCTTTGGACAAGACAACAGTAAAAAGCTCCTATTGGGTTATAAGTG TGCTGGTACTTTTTTTAATTTCTATAAAACCGATGGGCCTCAACTCATTCATTTAGGTAACTACAAACTACCTTATTCAA GTTTATTACTTCTTATTGAATTAGGTTTACTACTTAGCACTGAACTAGAGTCAGGAGAGATTGAGTTTGAACCCGCCTTA CCCTTGCAATATCAAGGGAAGAACATCGCAATAAAACCAATGCAAAAAGGGTCTCGATTGGTATATTACCGATTTAGTCC TACTGGTGCTGAGCTATGTAAACTGCTAGGCAATAAGCCGAATGAAAATTATTACGATAATCTCATCAGTTTATTAAGTC AGAAGTTTATGGTTGAAACGGATGTTGCTGCAAAATCCATTTCAACGATGGCTTAG
Upstream 100 bases:
>100_bases GAATTTATCATTTCGCCACTAATTACCTGCTACTTTATTTGACTAACTCGCAAATATCGCTTTGAGATTAAAGTTTTTAT TTTCAGCAACCGATAAGATA
Downstream 100 bases:
>100_bases TTGTCTAAGTTAATAGATAAGCATCAAAAATAATTAAAGCCCTAGTAGTTCCAAAAACAATCACTATTAGGGCTATTTTT CTTCTAGATAATTGAACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MGNHVKSKLGELMNTQQTIITKDETTKKEQPTHKKEHYVVSSARRLKEIAIQQGLAANLQPPKPEETLLKRALYREKLLR EQQQQNLEKIVKLAHDYCNDETAGDPDPDWLHRFFEMAKDIHDSSMQKLWSQIFKQEVISPGSTSMKALKVLKDMTQREA QTFQRAASLACSFGQDNSKKLLLGYKCAGTFFNFYKTDGPQLIHLGNYKLPYSSLLLLIELGLLLSTELESGEIEFEPAL PLQYQGKNIAIKPMQKGSRLVYYRFSPTGAELCKLLGNKPNENYYDNLISLLSQKFMVETDVAAKSISTMA
Sequences:
>Translated_311_residues MGNHVKSKLGELMNTQQTIITKDETTKKEQPTHKKEHYVVSSARRLKEIAIQQGLAANLQPPKPEETLLKRALYREKLLR EQQQQNLEKIVKLAHDYCNDETAGDPDPDWLHRFFEMAKDIHDSSMQKLWSQIFKQEVISPGSTSMKALKVLKDMTQREA QTFQRAASLACSFGQDNSKKLLLGYKCAGTFFNFYKTDGPQLIHLGNYKLPYSSLLLLIELGLLLSTELESGEIEFEPAL PLQYQGKNIAIKPMQKGSRLVYYRFSPTGAELCKLLGNKPNENYYDNLISLLSQKFMVETDVAAKSISTMA >Mature_310_residues GNHVKSKLGELMNTQQTIITKDETTKKEQPTHKKEHYVVSSARRLKEIAIQQGLAANLQPPKPEETLLKRALYREKLLRE QQQQNLEKIVKLAHDYCNDETAGDPDPDWLHRFFEMAKDIHDSSMQKLWSQIFKQEVISPGSTSMKALKVLKDMTQREAQ TFQRAASLACSFGQDNSKKLLLGYKCAGTFFNFYKTDGPQLIHLGNYKLPYSSLLLLIELGLLLSTELESGEIEFEPALP LQYQGKNIAIKPMQKGSRLVYYRFSPTGAELCKLLGNKPNENYYDNLISLLSQKFMVETDVAAKSISTMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35382; Mature: 35251
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNHVKSKLGELMNTQQTIITKDETTKKEQPTHKKEHYVVSSARRLKEIAIQQGLAANLQ CCCHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPKPEETLLKRALYREKLLREQQQQNLEKIVKLAHDYCNDETAGDPDPDWLHRFFEMAKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH IHDSSMQKLWSQIFKQEVISPGSTSMKALKVLKDMTQREAQTFQRAASLACSFGQDNSKK HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE LLLGYKCAGTFFNFYKTDGPQLIHLGNYKLPYSSLLLLIELGLLLSTELESGEIEFEPAL EEEEEEHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCC PLQYQGKNIAIKPMQKGSRLVYYRFSPTGAELCKLLGNKPNENYYDNLISLLSQKFMVET CCEECCCCEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH DVAAKSISTMA HHHHHHHHHCC >Mature Secondary Structure GNHVKSKLGELMNTQQTIITKDETTKKEQPTHKKEHYVVSSARRLKEIAIQQGLAANLQ CCHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPKPEETLLKRALYREKLLREQQQQNLEKIVKLAHDYCNDETAGDPDPDWLHRFFEMAKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH IHDSSMQKLWSQIFKQEVISPGSTSMKALKVLKDMTQREAQTFQRAASLACSFGQDNSKK HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE LLLGYKCAGTFFNFYKTDGPQLIHLGNYKLPYSSLLLLIELGLLLSTELESGEIEFEPAL EEEEEEHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCC PLQYQGKNIAIKPMQKGSRLVYYRFSPTGAELCKLLGNKPNENYYDNLISLLSQKFMVET CCEECCCCEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH DVAAKSISTMA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA