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The map label for this gene is yfbS [C]

Identifier: 59710929

GI number: 59710929

Start: 331907

End: 333634

Strand: Direct

Name: yfbS [C]

Synonym: VF_0322

Alternate gene names: 59710929

Gene position: 331907-333634 (Clockwise)

Preceding gene: 59710928

Following gene: 59710930

Centisome position: 11.45

GC content: 38.66

Gene sequence:

>1728_bases
ATGGCATGGGAACAAGGATTCGTTCTGGCGTTATTAACTCTGATTATTGTGAGTTTATTGGCAAGTAAGTTAAAACCAAG
CGTCATATTTGCAGGCTCTGCATTTATTGCTTTTATGGTTGGTATGATTGATTTACCTAGCTTGGCAAAAAACTTTACTA
ATTCATCTTTGCTAACGCTAGTGCTGCTTATTTTAAGTTCTTGTGCTTTAGAAAAAACACGTCTTATCAGTTGGGTTGGG
CGTTATATTTCTGAAGGAAGGTTAGGGAGTGTGGTAGGCAAATTAGGTCTATCTACTGCCTTACTTTCTTCTTTTACCAA
TAATACAGCGGTTGTGGTTTCACTGATTGGAGCAATCAAACGTAATCAACGACACGCTCCTTCACGATTACTTATTCCCT
TATCTTATGCCGCTATCTTAGGTGGAACATTAACGTTAATTGGTACTTCAACGAACCTTATCATTAATAGTTTTGTGGAA
GACACTGGTTTACCGAGTTTAAGTTTCTTTGCCCCTACAACGATTGGTCTAGCCGTTCTATTTGGTGGTTTATTGATTTT
AATTCCACTGAGTTATTTATTGCCTCAGTACGATGAAAGTCATCAAGATGAATTACCGTATTTTTTAGAAGCAAGAGTAG
AGGGTGGCTCACCACTAGTAGGCAAATCAATCAGTGAAAATAACCTTCGAGCATTGCGTAAGCTGTTTTTAGCGGAAGTG
ATTCGTAATGGAAAAACCATACCATCGGTTGATCCAGATATGATTTTATTAGCTGGAGATAGGCTGCTGTTTTGTGGGGA
CATTGAAAGTGTTACGACGTTACAAGAAATTAATGGCTTAACCTTATTTGGTCAGCATCATTTAAATGGACAGAACCTAC
TTGAAGTTGTTGTAAGCCAATCGGCTTCTATTCGTGGAAAAAGCATTAAGTCAGCTCAATTTAGAGAACGCTTTGATGCG
GTAGTGGTTGCTATTCGCCGAGGGCATGAACGACTTGAAGGTGGATTAGGAAAAATTGAATTACAAGCAGGGGATACATT
AATTTTGGTTCCCGGCAAAGACTTTGAACAGAGCAAGCAACAACTAAAACGTGAATTCGTCATTATCAGTGATTTAGATT
CAGCTGCAAAACTGGATGGAGATAAGAGTGCTTTAGTTTTGGTTGGTTTTGCTGCTGTGATTACCGCTGCTTTACTTGAT
GTGTTTCCTATTATTAAAGGACTCTCTGTTTATCTACTCGGTATGCTAGCGCTAGGTATTATTAATTTAGGTGAAATTCG
TAGACGATTCCCAATTGATATTGTTGTTATTGTTGGTGCAGCGCTTTCTATCGCACAGTTAATGTTGTCATCAGGACTAT
CTGTTCAATTAGGTGAAATATTTATTGAGCTGTTTAATGGCTGGGGAGTAATGGGAGCATTAATTGCGGTATACCTTATT
ACGTTGGTGTTGACTGAACTTATTACCAATAATGCAGCGGCAGCACTGGCTTTTCCTATTGGTTATAGCATGGCATTGGG
GTATGGCGTTGATCCCATGCCTTTTATTATGGCGGTGCTTTTTGGTGCGAGTGCCAGTTTTATTTCCCCTTATGGATATC
AAACTAATCTACTCGTTTTTAGTGTGGGCAATTACACACTGCTCGATTATGTGAAAGTGGGATTACCCATGTCGATTATT
TATTCGGTATTGGTATTAGCATTAATCCCTTATTTTTTCCCATTTTAA

Upstream 100 bases:

>100_bases
TCAGTGCGTTTGAAATTGAGCTAAATGCGTTAATTCGTAAGCACTTCCCGCATTGGGAAACCAAAGATATTTCTAAGCTT
TTAGGCTAAGGACTGTCACT

Downstream 100 bases:

>100_bases
TTCAAGGATGAAACATGACAGCACTATCAGTAATAAAAGATGAGAATGTCGTTTGGCATCAGCATACAGTAACAAAGGAA
ATTCGTTCCGATCTTAAAAA

Product: divalent anion:sodium symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MAWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTLVLLILSSCALEKTRLISWVG
RYISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIKRNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVE
DTGLPSLSFFAPTTIGLAVLFGGLLILIPLSYLLPQYDESHQDELPYFLEARVEGGSPLVGKSISENNLRALRKLFLAEV
IRNGKTIPSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLLEVVVSQSASIRGKSIKSAQFRERFDA
VVVAIRRGHERLEGGLGKIELQAGDTLILVPGKDFEQSKQQLKREFVIISDLDSAAKLDGDKSALVLVGFAAVITAALLD
VFPIIKGLSVYLLGMLALGIINLGEIRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGEIFIELFNGWGVMGALIAVYLI
TLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVFSVGNYTLLDYVKVGLPMSII
YSVLVLALIPYFFPF

Sequences:

>Translated_575_residues
MAWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTLVLLILSSCALEKTRLISWVG
RYISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIKRNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVE
DTGLPSLSFFAPTTIGLAVLFGGLLILIPLSYLLPQYDESHQDELPYFLEARVEGGSPLVGKSISENNLRALRKLFLAEV
IRNGKTIPSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLLEVVVSQSASIRGKSIKSAQFRERFDA
VVVAIRRGHERLEGGLGKIELQAGDTLILVPGKDFEQSKQQLKREFVIISDLDSAAKLDGDKSALVLVGFAAVITAALLD
VFPIIKGLSVYLLGMLALGIINLGEIRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGEIFIELFNGWGVMGALIAVYLI
TLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVFSVGNYTLLDYVKVGLPMSII
YSVLVLALIPYFFPF
>Mature_574_residues
AWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTLVLLILSSCALEKTRLISWVGR
YISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIKRNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVED
TGLPSLSFFAPTTIGLAVLFGGLLILIPLSYLLPQYDESHQDELPYFLEARVEGGSPLVGKSISENNLRALRKLFLAEVI
RNGKTIPSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLLEVVVSQSASIRGKSIKSAQFRERFDAV
VVAIRRGHERLEGGLGKIELQAGDTLILVPGKDFEQSKQQLKREFVIISDLDSAAKLDGDKSALVLVGFAAVITAALLDV
FPIIKGLSVYLLGMLALGIINLGEIRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGEIFIELFNGWGVMGALIAVYLIT
LVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVFSVGNYTLLDYVKVGLPMSIIY
SVLVLALIPYFFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=610, Percent_Identity=26.2295081967213, Blast_Score=150, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17551790, Length=140, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 61773; Mature: 61642

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTL
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCHHHHHHCCCHHHHHH
VLLILSSCALEKTRLISWVGRYISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVEDTGLPSLSFFAPTTIGLAVL
HCCCCCCCEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FGGLLILIPLSYLLPQYDESHQDELPYFLEARVEGGSPLVGKSISENNLRALRKLFLAEV
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
IRNGKTIPSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLLEVVVSQ
HHCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHC
SASIRGKSIKSAQFRERFDAVVVAIRRGHERLEGGLGKIELQAGDTLILVPGKDFEQSKQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHH
QLKREFVIISDLDSAAKLDGDKSALVLVGFAAVITAALLDVFPIIKGLSVYLLGMLALGI
HHHHHEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INLGEIRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGEIFIELFNGWGVMGALIAVYLI
HCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
TLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVF
HHHHHHHHHCCCHHHHEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
SVGNYTLLDYVKVGLPMSIIYSVLVLALIPYFFPF
ECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTL
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCHHHHHHCCCHHHHHH
VLLILSSCALEKTRLISWVGRYISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVEDTGLPSLSFFAPTTIGLAVL
HCCCCCCCEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FGGLLILIPLSYLLPQYDESHQDELPYFLEARVEGGSPLVGKSISENNLRALRKLFLAEV
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
IRNGKTIPSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLLEVVVSQ
HHCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHC
SASIRGKSIKSAQFRERFDAVVVAIRRGHERLEGGLGKIELQAGDTLILVPGKDFEQSKQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHH
QLKREFVIISDLDSAAKLDGDKSALVLVGFAAVITAALLDVFPIIKGLSVYLLGMLALGI
HHHHHEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INLGEIRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGEIFIELFNGWGVMGALIAVYLI
HCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
TLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVF
HHHHHHHHHCCCHHHHEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
SVGNYTLLDYVKVGLPMSIIYSVLVLALIPYFFPF
ECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]