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The map label for this gene is gfcC [H]

Identifier: 59710765

GI number: 59710765

Start: 177549

End: 178310

Strand: Reverse

Name: gfcC [H]

Synonym: VF_0158

Alternate gene names: 59710765

Gene position: 178310-177549 (Counterclockwise)

Preceding gene: 172087643

Following gene: 172087642

Centisome position: 6.15

GC content: 39.24

Gene sequence:

>762_bases
ATGCATTTTCTTTCTTCATTCGTTTTTTCTTTGCTTTTGTCTGCATCAACAGTTACTTATGCTAGCTCGACACAAGCGGT
ATCGGTCACGTTACCTAATCAAAATTTGGTGCTGAATTACTCGCAACCAGTAAGACTTGAGCAAGTCATTTTAGATGCAA
ATGCTCAAGTGAATTTTTATTCTCTTGGGGCAGCGTTAAGTGACAATCAGTTACAAAAAGACATCGATAATCTTCGAAAT
AACTCAATTGAGCAGCTATCTTCACTTTCTCGAGAGACATCACTTTTTTCTGCAAACAATGAATTTAAGCGTTCTGCGAC
GCAGATCATTTCACAGTTAGAGCATCACACTTTTGTGGGTCGTATTTTTTCGTCACTTGATCTCGATTTAATCCGAATTA
ACGAAAAACTGAACCCTATACTTAATGCTGATTATCAGCTTTTTGTGCACCCTCGCCCTACCTCTGTTTCTTTTTTTGGT
GCGATTGATTCTGAAAGCAGCATTTCAGTTCCTTTTATTGAGCACGCAAGCATTGATGACTATTTAGATTCACTCCCTCT
TTCTTCTACTGCTGATACCTCTACGATTTATGTCATTCAGCCTGATGGTGTAGTTCAAACCACTGAGTTTTCAGTATGGC
AAAACAAACCCGCTTATTTAGCTCCGGGGGCATCGGTGTATATCCCTCTTGGCGGATTACCAAGTGATTTTTCATCTTTA
AACACCTCTATTGTTCAACTGCTTCGTAATAAGGCGCTGTAA

Upstream 100 bases:

>100_bases
TTTAGGTCCTGATATTGGTGATATTGAAATGACGATACTGAAGCCTTTTGCTTTGTAAGCTCGTTAATAACCCAATTAAT
TAGTATTTAAAGGAACCGTC

Downstream 100 bases:

>100_bases
TTTATGATGACTCCAAAGTTTTCTTTATCTCTTATTGCGGGGGTTATTGCTTCTGCTTTGCCTTATTCAACCTTTGCTAC
AGATCATTCTGTTGCAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Group 4 capsule protein C homolog [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MHFLSSFVFSLLLSASTVTYASSTQAVSVTLPNQNLVLNYSQPVRLEQVILDANAQVNFYSLGAALSDNQLQKDIDNLRN
NSIEQLSSLSRETSLFSANNEFKRSATQIISQLEHHTFVGRIFSSLDLDLIRINEKLNPILNADYQLFVHPRPTSVSFFG
AIDSESSISVPFIEHASIDDYLDSLPLSSTADTSTIYVIQPDGVVQTTEFSVWQNKPAYLAPGASVYIPLGGLPSDFSSL
NTSIVQLLRNKAL

Sequences:

>Translated_253_residues
MHFLSSFVFSLLLSASTVTYASSTQAVSVTLPNQNLVLNYSQPVRLEQVILDANAQVNFYSLGAALSDNQLQKDIDNLRN
NSIEQLSSLSRETSLFSANNEFKRSATQIISQLEHHTFVGRIFSSLDLDLIRINEKLNPILNADYQLFVHPRPTSVSFFG
AIDSESSISVPFIEHASIDDYLDSLPLSSTADTSTIYVIQPDGVVQTTEFSVWQNKPAYLAPGASVYIPLGGLPSDFSSL
NTSIVQLLRNKAL
>Mature_253_residues
MHFLSSFVFSLLLSASTVTYASSTQAVSVTLPNQNLVLNYSQPVRLEQVILDANAQVNFYSLGAALSDNQLQKDIDNLRN
NSIEQLSSLSRETSLFSANNEFKRSATQIISQLEHHTFVGRIFSSLDLDLIRINEKLNPILNADYQLFVHPRPTSVSFFG
AIDSESSISVPFIEHASIDDYLDSLPLSSTADTSTIYVIQPDGVVQTTEFSVWQNKPAYLAPGASVYIPLGGLPSDFSSL
NTSIVQLLRNKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjbG [H]

Homologues:

Organism=Escherichia coli, GI1787220, Length=249, Percent_Identity=24.4979919678715, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790460, Length=145, Percent_Identity=31.7241379310345, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010425 [H]

Pfam domain/function: PF06251 DUF1017 [H]

EC number: NA

Molecular weight: Translated: 27853; Mature: 27853

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFLSSFVFSLLLSASTVTYASSTQAVSVTLPNQNLVLNYSQPVRLEQVILDANAQVNFY
CHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCEEEECCCCCEEEHEEECCCCEEEEE
SLGAALSDNQLQKDIDNLRNNSIEQLSSLSRETSLFSANNEFKRSATQIISQLEHHTFVG
EECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RIFSSLDLDLIRINEKLNPILNADYQLFVHPRPTSVSFFGAIDSESSISVPFIEHASIDD
HHHHHCCEEEEEECCCCCHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEECCCHHH
YLDSLPLSSTADTSTIYVIQPDGVVQTTEFSVWQNKPAYLAPGASVYIPLGGLPSDFSSL
HHHCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCEECCCCEEEEECCCCCCCHHHH
NTSIVQLLRNKAL
HHHHHHHHHHCCC
>Mature Secondary Structure
MHFLSSFVFSLLLSASTVTYASSTQAVSVTLPNQNLVLNYSQPVRLEQVILDANAQVNFY
CHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCEEEECCCCCEEEHEEECCCCEEEEE
SLGAALSDNQLQKDIDNLRNNSIEQLSSLSRETSLFSANNEFKRSATQIISQLEHHTFVG
EECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RIFSSLDLDLIRINEKLNPILNADYQLFVHPRPTSVSFFGAIDSESSISVPFIEHASIDD
HHHHHCCEEEEEECCCCCHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEECCCHHH
YLDSLPLSSTADTSTIYVIQPDGVVQTTEFSVWQNKPAYLAPGASVYIPLGGLPSDFSSL
HHHCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCEECCCCEEEEECCCCCCCHHHH
NTSIVQLLRNKAL
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]