| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59710757
Identifier: 59710757
GI number: 59710757
Start: 168574
End: 169551
Strand: Reverse
Name: 59710757
Synonym: VF_0150
Alternate gene names: NA
Gene position: 169551-168574 (Counterclockwise)
Preceding gene: 59710758
Following gene: 59710746
Centisome position: 5.85
GC content: 25.36
Gene sequence:
>978_bases ATGAATGTATTTCTAGTTACTTCTCCATTTCAATATATCTGTGCAATCGAAGCAAAATTCCACTACAAGTCTAAGAATAA TATTCTAATATTAATTGAACAAAATAGTCATATAGGTAAGAAACAAATGTCTTCATTAATAAAAAACGAAGACTGGGATT ATATTTTTACTTTCCCTCGTTCAAACAGAACGTTTATAACCCCAAAAATAATAAAGAAAATAAAACAAATTTCATCTAAT AAATTAGATACTTTATTTTATAGTGAATATAACGCATGGCGTTCTAAGTTAATAATTAAAAATTTAGATTTTCAAAAACA TGTGTTCTTTGATGATGGTACCATGACTTATTTTGATTACTATGATTATATTGAACCTAAAGCTTCATTTTACCGACCTC GGTTCCTTCAAGATATTCAACTTCGACTTCAAGGAATAACCCCTATTAGTAAACTTGATTTTTTTGATAATACAGAAATA TTTTCTATTTTTGAATTTAAAAATTGTGTAATTACTTATACTGAAAATAAATTGAACGTATTAAAAAAGCGTATTAACCG ATTAAATAATACATCACAATTTGAATATGATGTGTTTATCGGTCAAGGAAGCGTGGATGAAAAAAATAGAATTTCATTAA AAGAATATATTACATTAATTAAAAGTGTATTATCTGAATCAAAATCATACCTAATTTACATTCCTCATCGAACAGAAGCG ACTCATGTAACTGAATCCATAAAAAAAATAAATGGTGTAATATTCCATCAACCAAATTATCCAATTGAAGTTGAATTAGT TGAAAATAACATTACACCATTAACTATTACAGGATTGTCATCTACCGCTCTTTATACATTATCAAAAATATATCCAAATT CAAAAATTAAATTAGTTGATCAACAATCCATTTCGAAAGGAGAAAGAGATAAAAGAATTCAACTTTATTTAAATGAATAT TTTGATAAAATCAAATAA
Upstream 100 bases:
>100_bases TCCTTTCAATTGGATAAACTTTACTTATACATATTTAATTCTTATTTTATGTTTAACTCTACAATCTTACCACTCGACAA AAGATATCAGGTCATAACAT
Downstream 100 bases:
>100_bases CTAAAAATGTCATTGCTAAACAATGACATTTTTATTTTCAATTAACGCTTTCCATTTTTTATAAATAGATTCTTTTGAAT AACATTCAATACTATCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNVFLVTSPFQYICAIEAKFHYKSKNNILILIEQNSHIGKKQMSSLIKNEDWDYIFTFPRSNRTFITPKIIKKIKQISSN KLDTLFYSEYNAWRSKLIIKNLDFQKHVFFDDGTMTYFDYYDYIEPKASFYRPRFLQDIQLRLQGITPISKLDFFDNTEI FSIFEFKNCVITYTENKLNVLKKRINRLNNTSQFEYDVFIGQGSVDEKNRISLKEYITLIKSVLSESKSYLIYIPHRTEA THVTESIKKINGVIFHQPNYPIEVELVENNITPLTITGLSSTALYTLSKIYPNSKIKLVDQQSISKGERDKRIQLYLNEY FDKIK
Sequences:
>Translated_325_residues MNVFLVTSPFQYICAIEAKFHYKSKNNILILIEQNSHIGKKQMSSLIKNEDWDYIFTFPRSNRTFITPKIIKKIKQISSN KLDTLFYSEYNAWRSKLIIKNLDFQKHVFFDDGTMTYFDYYDYIEPKASFYRPRFLQDIQLRLQGITPISKLDFFDNTEI FSIFEFKNCVITYTENKLNVLKKRINRLNNTSQFEYDVFIGQGSVDEKNRISLKEYITLIKSVLSESKSYLIYIPHRTEA THVTESIKKINGVIFHQPNYPIEVELVENNITPLTITGLSSTALYTLSKIYPNSKIKLVDQQSISKGERDKRIQLYLNEY FDKIK >Mature_325_residues MNVFLVTSPFQYICAIEAKFHYKSKNNILILIEQNSHIGKKQMSSLIKNEDWDYIFTFPRSNRTFITPKIIKKIKQISSN KLDTLFYSEYNAWRSKLIIKNLDFQKHVFFDDGTMTYFDYYDYIEPKASFYRPRFLQDIQLRLQGITPISKLDFFDNTEI FSIFEFKNCVITYTENKLNVLKKRINRLNNTSQFEYDVFIGQGSVDEKNRISLKEYITLIKSVLSESKSYLIYIPHRTEA THVTESIKKINGVIFHQPNYPIEVELVENNITPLTITGLSSTALYTLSKIYPNSKIKLVDQQSISKGERDKRIQLYLNEY FDKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38428; Mature: 38428
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFLVTSPFQYICAIEAKFHYKSKNNILILIEQNSHIGKKQMSSLIKNEDWDYIFTFPR CEEEEEECCCEEEEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECC SNRTFITPKIIKKIKQISSNKLDTLFYSEYNAWRSKLIIKNLDFQKHVFFDDGTMTYFDY CCCEEECHHHHHHHHHHCCCCCEEEEEHHHHHHHHEEEEECCCCCEEEEEECCEEEEEEH YDYIEPKASFYRPRFLQDIQLRLQGITPISKLDFFDNTEIFSIFEFKNCVITYTENKLNV HHHCCCCHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEECCEEEEEECCHHHH LKKRINRLNNTSQFEYDVFIGQGSVDEKNRISLKEYITLIKSVLSESKSYLIYIPHRTEA HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH THVTESIKKINGVIFHQPNYPIEVELVENNITPLTITGLSSTALYTLSKIYPNSKIKLVD HHHHHHHHHHCCEEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEE QQSISKGERDKRIQLYLNEYFDKIK HHHCCCCCCCCEEEEEEHHHHHHCC >Mature Secondary Structure MNVFLVTSPFQYICAIEAKFHYKSKNNILILIEQNSHIGKKQMSSLIKNEDWDYIFTFPR CEEEEEECCCEEEEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECC SNRTFITPKIIKKIKQISSNKLDTLFYSEYNAWRSKLIIKNLDFQKHVFFDDGTMTYFDY CCCEEECHHHHHHHHHHCCCCCEEEEEHHHHHHHHEEEEECCCCCEEEEEECCEEEEEEH YDYIEPKASFYRPRFLQDIQLRLQGITPISKLDFFDNTEIFSIFEFKNCVITYTENKLNV HHHCCCCHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEECCEEEEEECCHHHH LKKRINRLNNTSQFEYDVFIGQGSVDEKNRISLKEYITLIKSVLSESKSYLIYIPHRTEA HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH THVTESIKKINGVIFHQPNYPIEVELVENNITPLTITGLSSTALYTLSKIYPNSKIKLVD HHHHHHHHHHCCEEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEE QQSISKGERDKRIQLYLNEYFDKIK HHHCCCCCCCCEEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA