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The map label for this gene is opsX [H]

Identifier: 59710742

GI number: 59710742

Start: 152194

End: 153237

Strand: Reverse

Name: opsX [H]

Synonym: VF_0135

Alternate gene names: 59710742

Gene position: 153237-152194 (Counterclockwise)

Preceding gene: 59710745

Following gene: 59710741

Centisome position: 5.29

GC content: 43.01

Gene sequence:

>1044_bases
ATGCCTTTATTCACCTCAGCCCCTCACTCTTTATGTATTTTGAGACTCTCTGCCATTGGGGACGTTTGTCATGCTATTGC
AGCGGTTCAGACGATTCAAACAACATGGCCAAGCACGAAAATTACGTGGATAGTAGGGAAAGTAGAGGCGCAATTGATCC
ATGATTTACCCGGTATTACGGTGATCCCGTTTGATAAGAAATTAGGCCTTGCAGGCATGAGAACCATTTGGCATCAATTG
AAAGATCAACAATTTGATGCCTTAGTTCACATGCAACTCGCATTACGAGCCAGCCTACTAACGGTGGGGATTAAGGCAAA
ATACAAGGTAGGCTTTAATCGAAAACGAGCAAAAGAAGGCCAATGGTTATTTACCAACCGTAAAATTGAAGATACTGCAT
CTGCACACGTACTGGATAGCTTTTACGCTTTTATTGAGTATTTAGGTGTACCTAAACGTGAGCCCTCGTGGAACATCCCT
TTATCCGAAGTGGATTTGGCCTTTATTGATACACATGTATCCTCAGAAAAACCGTATGTGGTGATCTCTCCAGCAGCAAG
CAAAGACGAGCGTAACTGGCTAACCGAGCGCTACGCTCAATTGGCGGATTGGTTAAATGAACAAGGTTATCAAGTGGTGT
TATGTGGTTCGCCAAGTGAACGTGAAAAGCAACTTGGTGCTGCGATTGAATCCTTAGCTCAATCTCCTCTTATTAATATT
ATTGGCCTAACGTCATTAAAGCAATTAACGGCTGTCTTGAAAAAAGCGACCGTGGTGATTGCGCCGGATTCTGGCCCCGC
TCATATTGCCACAACTCAACACACGCCTGTCATTGGCTTGTATGGTCACAGCAACCCAAAACGTACCGGGCCATATAATA
GCTTACCTTATGTAGTGAGCGTGTATGAACACCATGTAACCCAACAACAAAATAAACCCATTGAAGATTTAAAATGGAGT
ACGCGTGTTAAAGGTGACCATATTATGCAAGACATTACGCTTGATATGGTAAAAGAGGCTTTTTTACGTTTACGCCATCA
ATAA

Upstream 100 bases:

>100_bases
AGGGAGCTTACGACCGCTCTGAACCCTGCGTTTTTGTCATTTTACATTTATGACGGTTAATAGCATAATTCTACCTCATT
CTTACAGGGTTAACATCTCT

Downstream 100 bases:

>100_bases
GGATACGTCATGACTCACTCTTCGACGCCGACGTTAGCGGTAGCACTTATCGTAAAAAATGAAGCGAAGCATTTACAAGC
CTGTTTAGAAACCGTACAAG

Product: ADP-heptose--LPS heptosyltransferase III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPLFTSAPHSLCILRLSAIGDVCHAIAAVQTIQTTWPSTKITWIVGKVEAQLIHDLPGITVIPFDKKLGLAGMRTIWHQL
KDQQFDALVHMQLALRASLLTVGIKAKYKVGFNRKRAKEGQWLFTNRKIEDTASAHVLDSFYAFIEYLGVPKREPSWNIP
LSEVDLAFIDTHVSSEKPYVVISPAASKDERNWLTERYAQLADWLNEQGYQVVLCGSPSEREKQLGAAIESLAQSPLINI
IGLTSLKQLTAVLKKATVVIAPDSGPAHIATTQHTPVIGLYGHSNPKRTGPYNSLPYVVSVYEHHVTQQQNKPIEDLKWS
TRVKGDHIMQDITLDMVKEAFLRLRHQ

Sequences:

>Translated_347_residues
MPLFTSAPHSLCILRLSAIGDVCHAIAAVQTIQTTWPSTKITWIVGKVEAQLIHDLPGITVIPFDKKLGLAGMRTIWHQL
KDQQFDALVHMQLALRASLLTVGIKAKYKVGFNRKRAKEGQWLFTNRKIEDTASAHVLDSFYAFIEYLGVPKREPSWNIP
LSEVDLAFIDTHVSSEKPYVVISPAASKDERNWLTERYAQLADWLNEQGYQVVLCGSPSEREKQLGAAIESLAQSPLINI
IGLTSLKQLTAVLKKATVVIAPDSGPAHIATTQHTPVIGLYGHSNPKRTGPYNSLPYVVSVYEHHVTQQQNKPIEDLKWS
TRVKGDHIMQDITLDMVKEAFLRLRHQ
>Mature_346_residues
PLFTSAPHSLCILRLSAIGDVCHAIAAVQTIQTTWPSTKITWIVGKVEAQLIHDLPGITVIPFDKKLGLAGMRTIWHQLK
DQQFDALVHMQLALRASLLTVGIKAKYKVGFNRKRAKEGQWLFTNRKIEDTASAHVLDSFYAFIEYLGVPKREPSWNIPL
SEVDLAFIDTHVSSEKPYVVISPAASKDERNWLTERYAQLADWLNEQGYQVVLCGSPSEREKQLGAAIESLAQSPLINII
GLTSLKQLTAVLKKATVVIAPDSGPAHIATTQHTPVIGLYGHSNPKRTGPYNSLPYVVSVYEHHVTQQQNKPIEDLKWST
RVKGDHIMQDITLDMVKEAFLRLRHQ

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=288, Percent_Identity=22.9166666666667, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1790050, Length=292, Percent_Identity=23.972602739726, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790051, Length=300, Percent_Identity=24.3333333333333, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38836; Mature: 38705

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFTSAPHSLCILRLSAIGDVCHAIAAVQTIQTTWPSTKITWIVGKVEAQLIHDLPGIT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCE
VIPFDKKLGLAGMRTIWHQLKDQQFDALVHMQLALRASLLTVGIKAKYKVGFNRKRAKEG
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHCCCC
QWLFTNRKIEDTASAHVLDSFYAFIEYLGVPKREPSWNIPLSEVDLAFIDTHVSSEKPYV
CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEEECCCCCCEE
VISPAASKDERNWLTERYAQLADWLNEQGYQVVLCGSPSEREKQLGAAIESLAQSPLINI
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEH
IGLTSLKQLTAVLKKATVVIAPDSGPAHIATTQHTPVIGLYGHSNPKRTGPYNSLPYVVS
HHHHHHHHHHHHHHHCEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHH
VYEHHVTQQQNKPIEDLKWSTRVKGDHIMQDITLDMVKEAFLRLRHQ
HHHHHHHHHCCCCHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLFTSAPHSLCILRLSAIGDVCHAIAAVQTIQTTWPSTKITWIVGKVEAQLIHDLPGIT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCE
VIPFDKKLGLAGMRTIWHQLKDQQFDALVHMQLALRASLLTVGIKAKYKVGFNRKRAKEG
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHCCCC
QWLFTNRKIEDTASAHVLDSFYAFIEYLGVPKREPSWNIPLSEVDLAFIDTHVSSEKPYV
CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEEECCCCCCEE
VISPAASKDERNWLTERYAQLADWLNEQGYQVVLCGSPSEREKQLGAAIESLAQSPLINI
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEH
IGLTSLKQLTAVLKKATVVIAPDSGPAHIATTQHTPVIGLYGHSNPKRTGPYNSLPYVVS
HHHHHHHHHHHHHHHCEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHH
VYEHHVTQQQNKPIEDLKWSTRVKGDHIMQDITLDMVKEAFLRLRHQ
HHHHHHHHHCCCCHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]