Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 172087775

GI number: 172087775

Start: 2706722

End: 2707267

Strand: Reverse

Name: nusG [H]

Synonym: VF_2421

Alternate gene names: 172087775

Gene position: 2707267-2706722 (Counterclockwise)

Preceding gene: 59713029

Following gene: 59713026

Centisome position: 93.43

GC content: 41.94

Gene sequence:

>546_bases
ATGAGTGAAGCTCCAAAAAAACGTTGGTATGTAGTTCAAGCTTTTTCAGGCTTTGAAGGTCGTGTATCTCAATCGCTACG
CGAACATATTAAAATGCATAACATGGAAGAGTTATTTGGTGAAGTACTAGTACCAACTGAAGAAGTGGTAGAAATGCGTG
CTGGCCAACGTCGTAAAAGCGAACGTAAATTTTTCCCTGGTTACGTTCTAGTGCAAATGATCATGAATGATGAATCATGG
CACTTAGTACGTAGTATTCCACGTGTAATGGGGTTCATTGGTGGTACTTCGGATCGCCCTGCACCAATTACTGATAAAGA
AGCGGATGCCATTTTAAACCGTCTTGAGCAAGCGAGTGAAGCTCCACGTCCTAAGACATTGTTTGAAGCTGGTGAAGTGG
TTCGTGTTACAGAAGGCCCATTCGCAGACTTTAACGGTACTGTTGAAGAAGTGGATTACGAAAAGAGTCGCTTAAAAGTA
TCTGTATCTATCTTTGGTCGTGCAACTCCAGTAGAACTAGAGTTCAGCCAAGTAGAAAAAAACTGA

Upstream 100 bases:

>100_bases
TCTAGCTGTATGTATCGTGATGGCTCTGATTTTATGGGGCATTGATGGTATTATGGTTAGACTAATTGGCTTAATCACAG
GTGTTTGAGGATAAGTGATC

Downstream 100 bases:

>100_bases
TCGAAAAATCAGCAAAAGGTATTGTCAAAGGCGCGAATTATTACTATAATTTCGCGCCTTTTTGTTAACGGGGAGCTAAT
CCAGTTGGATAGCGTTTGAA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSEAPKKRWYVVQAFSGFEGRVSQSLREHIKMHNMEELFGEVLVPTEEVVEMRAGQRRKSERKFFPGYVLVQMIMNDESW
HLVRSIPRVMGFIGGTSDRPAPITDKEADAILNRLEQASEAPRPKTLFEAGEVVRVTEGPFADFNGTVEEVDYEKSRLKV
SVSIFGRATPVELEFSQVEKN

Sequences:

>Translated_181_residues
MSEAPKKRWYVVQAFSGFEGRVSQSLREHIKMHNMEELFGEVLVPTEEVVEMRAGQRRKSERKFFPGYVLVQMIMNDESW
HLVRSIPRVMGFIGGTSDRPAPITDKEADAILNRLEQASEAPRPKTLFEAGEVVRVTEGPFADFNGTVEEVDYEKSRLKV
SVSIFGRATPVELEFSQVEKN
>Mature_180_residues
SEAPKKRWYVVQAFSGFEGRVSQSLREHIKMHNMEELFGEVLVPTEEVVEMRAGQRRKSERKFFPGYVLVQMIMNDESWH
LVRSIPRVMGFIGGTSDRPAPITDKEADAILNRLEQASEAPRPKTLFEAGEVVRVTEGPFADFNGTVEEVDYEKSRLKVS
VSIFGRATPVELEFSQVEKN

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=180, Percent_Identity=86.6666666666667, Blast_Score=331, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20637; Mature: 20506

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAPKKRWYVVQAFSGFEGRVSQSLREHIKMHNMEELFGEVLVPTEEVVEMRAGQRRKS
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCHHHHH
ERKFFPGYVLVQMIMNDESWHLVRSIPRVMGFIGGTSDRPAPITDKEADAILNRLEQASE
HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
APRPKTLFEAGEVVRVTEGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFSQVEK
CCCCHHHHCCCCEEEECCCCCCCCCCCHHHHCCCHHHEEEEEEEECCCCCCEEEHHHHCC
N
C
>Mature Secondary Structure 
SEAPKKRWYVVQAFSGFEGRVSQSLREHIKMHNMEELFGEVLVPTEEVVEMRAGQRRKS
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCHHHHH
ERKFFPGYVLVQMIMNDESWHLVRSIPRVMGFIGGTSDRPAPITDKEADAILNRLEQASE
HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
APRPKTLFEAGEVVRVTEGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFSQVEK
CCCCHHHHCCCCEEEECCCCCCCCCCCHHHHCCCHHHEEEEEEEECCCCCCEEEHHHHCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]