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The map label for this gene is secE [H]

Identifier: 59713029

GI number: 59713029

Start: 2707280

End: 2707657

Strand: Reverse

Name: secE [H]

Synonym: VF_2422

Alternate gene names: 59713029

Gene position: 2707657-2707280 (Counterclockwise)

Preceding gene: 172087776

Following gene: 172087775

Centisome position: 93.45

GC content: 38.89

Gene sequence:

>378_bases
ATGAAAACAAATACTGAGACAACAGAAACTTCAGGCGCAGCTGATACAGTAAAATGGTTACTTGTTTTAGTTCTATTATC
TGCTGCTGTTGTTGGTAATTACTTACTAGCGTATTTATCTGTTGTTATTCGAGCTGCCGGTGTGGTTGCATTAATTGCTG
CTGCTGGTGGTATTGCTGCTTTCACAGCAAAAGGTCAAACTGCAATTGCATTTGCTCGTGAATCAAGAATGGAAGTTAGA
AAGGTTGTTTGGCTTACACGCCAAGAAACAACACAAACAACTTTCATTGTTCTAGCTGTATGTATCGTGATGGCTCTGAT
TTTATGGGGCATTGATGGTATTATGGTTAGACTAATTGGCTTAATCACAGGTGTTTGA

Upstream 100 bases:

>100_bases
TTGTTGGTTTATGGAATGAAGATACTAGGCTATATTAAGTCTGGTTAACAATTTCTATCAAGTGATAGAAGTAAATTATG
GTTATGTCACAGGTTGGTTT

Downstream 100 bases:

>100_bases
GGATAAGTGATCATGAGTGAAGCTCCAAAAAAACGTTGGTATGTAGTTCAAGCTTTTTCAGGCTTTGAAGGTCGTGTATC
TCAATCGCTACGCGAACATA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKTNTETTETSGAADTVKWLLVLVLLSAAVVGNYLLAYLSVVIRAAGVVALIAAAGGIAAFTAKGQTAIAFARESRMEVR
KVVWLTRQETTQTTFIVLAVCIVMALILWGIDGIMVRLIGLITGV

Sequences:

>Translated_125_residues
MKTNTETTETSGAADTVKWLLVLVLLSAAVVGNYLLAYLSVVIRAAGVVALIAAAGGIAAFTAKGQTAIAFARESRMEVR
KVVWLTRQETTQTTFIVLAVCIVMALILWGIDGIMVRLIGLITGV
>Mature_125_residues
MKTNTETTETSGAADTVKWLLVLVLLSAAVVGNYLLAYLSVVIRAAGVVALIAAAGGIAAFTAKGQTAIAFARESRMEVR
KVVWLTRQETTQTTFIVLAVCIVMALILWGIDGIMVRLIGLITGV

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=125, Percent_Identity=55.2, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13223; Mature: 13223

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNTETTETSGAADTVKWLLVLVLLSAAVVGNYLLAYLSVVIRAAGVVALIAAAGGIAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FTAKGQTAIAFARESRMEVRKVVWLTRQETTQTTFIVLAVCIVMALILWGIDGIMVRLIG
HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LITGV
HHHCC
>Mature Secondary Structure
MKTNTETTETSGAADTVKWLLVLVLLSAAVVGNYLLAYLSVVIRAAGVVALIAAAGGIAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FTAKGQTAIAFARESRMEVRKVVWLTRQETTQTTFIVLAVCIVMALILWGIDGIMVRLIG
HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LITGV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]