Click here to switch to the map view.

The map label for this gene is flaE [H]

Identifier: 172087731

GI number: 172087731

Start: 2093158

End: 2094354

Strand: Reverse

Name: flaE [H]

Synonym: VF_1862

Alternate gene names: 172087731

Gene position: 2094354-2093158 (Counterclockwise)

Preceding gene: 59712470

Following gene: 59712468

Centisome position: 72.28

GC content: 44.44

Gene sequence:

>1197_bases
ATGGCTGGGGCGGAGGATGAGACCAAACCACCATTGCACTTTCCCTTAGGAGATCTATTTATGTCTATTACAGTAAATAC
TAACGTATCAGCAATGACTGCACAGCGTTACTTAAACAGCGCAACTGACGGCGTTAACCAATCTATGGAACGTCTATCAT
CTGGTAGCAAAATCAACAGTGCTAAAGATGACGCAGCTGGTCTACAAATCTCTAACCGTCTAAACACGCAAACTCGTGGT
CTAGACGTAGCGGTTCGTAACGCAAACGACGGCATCTCTATGATGCAAACTGCTGAAGGCGCAATGAAAGAGACTTCAAA
CATCCTTTCTCGTGTACGTGACCTAGCACTGCAATCGTCAAATGGTTCAAACACTGACGCTGACCGTCAAGCGATCCAAC
AAGAAGTTACGGCTCTTTCTGACGAAATGAACCGTATCGCTGAAACAACTTCTTTCGGTGGCACACGTCTACTTAACGGT
AACTTCGGTACTAAATCTTTCCAAGTTGGTGCTGATTCAGGTGAAGCAGTAATGCTTACTCTAAACAACCTACGTGCAGA
CGAAGCAAACATGGGTGGTAAAACATTCACAGCTTCTGAAGGTGTTGCTGCTGGTTGGACTGCTGGTAAAGACGCAAACA
TGACTATCACAATCGCTGATAAGAATGGTGAAGAGCAAGCTATCGAAATCAACGCTAAAGCTGGCGACGATATCGAAGAA
GTTGCAACATACATCAACGGTCAAACTGACAAAGTTAGCGCTTCTGTTGGCGAAGATGGCAAACTACAAGTATTCGCAGC
TAAAGACGTTGCAGAAGGCGAAATCAGCTTCTCTGGTGCTCTAGCTAAAGAAACTGGTATGGCTGATGCTGAAGTTGCAA
ACAAAACTGTTGGCAACATCGACGTAACTACAGTTGCTGGTTCTCAAAACGCAGTAGCAGTTGTTGACGCAGCAATGAAA
TTTGTTGATAGCCACCGTTCTGAGCTAGGTGCTGCTCAAAACCGTATGGGTCACACAATCAGCAACTTAGACAACATTAA
CGAAAACGTTTCTGCTTCTAAGAGCCAAATCAAAGACGTTGATTTCGCGAAAGAAACAACTGAAATGACTAAGTCTCAAA
TCCTACAGCAAGCAAGTTCTTCTATCCTTGCTCAAGCTAAGCAAGCGCCAAACGCTGCTCTAGGTCTATTACGTTAA

Upstream 100 bases:

>100_bases
TTTATAAAAATTAAACTTAGGCTATCTCGGCGATGTATTTTGTAGAGGTGAGAGTCTACAAAGTATATAGAGATACGCTT
TTAAATATATGTGAGAAACA

Downstream 100 bases:

>100_bases
TCGTTGATTAATTGATAATACTAAAATAGGTAGGTGGGCGGCTTCATCGTCTACCCACTTACTGAAATATGACAGCAGGA
CCGCTCCTCTTGCTGTCTTT

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MAGAEDETKPPLHFPLGDLFMSITVNTNVSAMTAQRYLNSATDGVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRG
LDVAVRNANDGISMMQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRQAIQQEVTALSDEMNRIAETTSFGGTRLLNG
NFGTKSFQVGADSGEAVMLTLNNLRADEANMGGKTFTASEGVAAGWTAGKDANMTITIADKNGEEQAIEINAKAGDDIEE
VATYINGQTDKVSASVGEDGKLQVFAAKDVAEGEISFSGALAKETGMADAEVANKTVGNIDVTTVAGSQNAVAVVDAAMK
FVDSHRSELGAAQNRMGHTISNLDNINENVSASKSQIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALGLLR

Sequences:

>Translated_398_residues
MAGAEDETKPPLHFPLGDLFMSITVNTNVSAMTAQRYLNSATDGVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRG
LDVAVRNANDGISMMQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRQAIQQEVTALSDEMNRIAETTSFGGTRLLNG
NFGTKSFQVGADSGEAVMLTLNNLRADEANMGGKTFTASEGVAAGWTAGKDANMTITIADKNGEEQAIEINAKAGDDIEE
VATYINGQTDKVSASVGEDGKLQVFAAKDVAEGEISFSGALAKETGMADAEVANKTVGNIDVTTVAGSQNAVAVVDAAMK
FVDSHRSELGAAQNRMGHTISNLDNINENVSASKSQIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALGLLR
>Mature_397_residues
AGAEDETKPPLHFPLGDLFMSITVNTNVSAMTAQRYLNSATDGVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRGL
DVAVRNANDGISMMQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRQAIQQEVTALSDEMNRIAETTSFGGTRLLNGN
FGTKSFQVGADSGEAVMLTLNNLRADEANMGGKTFTASEGVAAGWTAGKDANMTITIADKNGEEQAIEINAKAGDDIEEV
ATYINGQTDKVSASVGEDGKLQVFAAKDVAEGEISFSGALAKETGMADAEVANKTVGNIDVTTVAGSQNAVAVVDAAMKF
VDSHRSELGAAQNRMGHTISNLDNINENVSASKSQIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALGLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA is not essential for polar flagellar synthesis and swimming motility. Homopolymer of flaA is able to form a functional filament [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=173, Percent_Identity=41.6184971098266, Blast_Score=131, Evalue=8e-32,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 41742; Mature: 41610

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAEDETKPPLHFPLGDLFMSITVNTNVSAMTAQRYLNSATDGVNQSMERLSSGSKINS
CCCCCCCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AKDDAAGLQISNRLNTQTRGLDVAVRNANDGISMMQTAEGAMKETSNILSRVRDLALQSS
CCCCCCCCEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NGSNTDADRQAIQQEVTALSDEMNRIAETTSFGGTRLLNGNFGTKSFQVGADSGEAVMLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCEEEEE
LNNLRADEANMGGKTFTASEGVAAGWTAGKDANMTITIADKNGEEQAIEINAKAGDDIEE
ECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHH
VATYINGQTDKVSASVGEDGKLQVFAAKDVAEGEISFSGALAKETGMADAEVANKTVGNI
HHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCEEECCCHHHHCCCCHHHHHHCCCCCE
DVTTVAGSQNAVAVVDAAMKFVDSHRSELGAAQNRMGHTISNLDNINENVSASKSQIKDV
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHH
DFAKETTEMTKSQILQQASSSILAQAKQAPNAALGLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure 
AGAEDETKPPLHFPLGDLFMSITVNTNVSAMTAQRYLNSATDGVNQSMERLSSGSKINS
CCCCCCCCCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AKDDAAGLQISNRLNTQTRGLDVAVRNANDGISMMQTAEGAMKETSNILSRVRDLALQSS
CCCCCCCCEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NGSNTDADRQAIQQEVTALSDEMNRIAETTSFGGTRLLNGNFGTKSFQVGADSGEAVMLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCEEEEE
LNNLRADEANMGGKTFTASEGVAAGWTAGKDANMTITIADKNGEEQAIEINAKAGDDIEE
ECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHH
VATYINGQTDKVSASVGEDGKLQVFAAKDVAEGEISFSGALAKETGMADAEVANKTVGNI
HHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCEEECCCHHHHCCCCHHHHHHCCCCCE
DVTTVAGSQNAVAVVDAAMKFVDSHRSELGAAQNRMGHTISNLDNINENVSASKSQIKDV
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHH
DFAKETTEMTKSQILQQASSSILAQAKQAPNAALGLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883718; 12620739 [H]