Click here to switch to the map view.

The map label for this gene is 172087728

Identifier: 172087728

GI number: 172087728

Start: 2018161

End: 2018415

Strand: Direct

Name: 172087728

Synonym: VF_2634

Alternate gene names: NA

Gene position: 2018161-2018415 (Clockwise)

Preceding gene: 59712393

Following gene: 59712396

Centisome position: 69.65

GC content: 30.98

Gene sequence:

>255_bases
ATGCTCTTTTTCTTACTTTCTCTTTTTACTATAGAGAAACACCAAAAAAGGAGAATAATTATGAATCGAATAAAAACAAT
GCTTAAACAAGCCATTAATAACAATAGAAAAGAATGGCTTGCACTCATTACTTATGGATACAACATTGAGTCTAAATCAG
CGTGGCAATACCTTGGCTACCAATCAAAAAATGCATATTTTTATGACCTTAAAGAAAACCTACATCAATTGCCAACAGCA
CTTAACAATCACTAA

Upstream 100 bases:

>100_bases
GTACCCATTCACTAAATAATGCTAAAACATGCCTTAATAGTACTGTTTATTTCATAAAAAAGTAGGGCTTGATGGAATAG
TATTAAAAGTAGATTAGTTA

Downstream 100 bases:

>100_bases
TACAAAAAATGCCAACGTAATCTACACTACGTTGGCATTCATATATTAAAAAATAAGGGAGTAACTTACATTACGCACTC
TTGCATCTCTTTGGCACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MLFFLLSLFTIEKHQKRRIIMNRIKTMLKQAINNNRKEWLALITYGYNIESKSAWQYLGYQSKNAYFYDLKENLHQLPTA
LNNH

Sequences:

>Translated_84_residues
MLFFLLSLFTIEKHQKRRIIMNRIKTMLKQAINNNRKEWLALITYGYNIESKSAWQYLGYQSKNAYFYDLKENLHQLPTA
LNNH
>Mature_84_residues
MLFFLLSLFTIEKHQKRRIIMNRIKTMLKQAINNNRKEWLALITYGYNIESKSAWQYLGYQSKNAYFYDLKENLHQLPTA
LNNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10182; Mature: 10182

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFFLLSLFTIEKHQKRRIIMNRIKTMLKQAINNNRKEWLALITYGYNIESKSAWQYLGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCC
QSKNAYFYDLKENLHQLPTALNNH
CCCCCEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFFLLSLFTIEKHQKRRIIMNRIKTMLKQAINNNRKEWLALITYGYNIESKSAWQYLGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCC
QSKNAYFYDLKENLHQLPTALNNH
CCCCCEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA