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The map label for this gene is 172087707

Identifier: 172087707

GI number: 172087707

Start: 1559316

End: 1560119

Strand: Direct

Name: 172087707

Synonym: VF_2616

Alternate gene names: NA

Gene position: 1559316-1560119 (Clockwise)

Preceding gene: 59712014

Following gene: 59712018

Centisome position: 53.82

GC content: 35.57

Gene sequence:

>804_bases
ATGGAAAATAATTGGATTGAATACAGTGACACGTTACGTTTTGGATTTTTTGTTACTGCTTTCATCATTTTTGCTTTGGC
TGAATACAAATGGCCTCGTAAAGCACTCACTCAAAATAAACAGTTCCGTTGGTTAAACAATATAGGCTTAATTTTTTTCA
ACAGTATCGTCCTTCGTTTAACCTTACCGTTATTAGCCGTTGATGCTGCTCTTATCGCAAATCAGGAACAATTTGGTTTA
TTTAATTACCTCAATACGCCTACTTTCTTAACGATTCTCTTATCCATTTTATTATTGGATTGGCTGATTTATTGGCAACA
CCGAGCGTTTCACCGCATTCCTTTACTGTGGCGATTACATCGTATGCATCACTCAGATCAAGATATTGATGTCACAACAG
GTACACGCTTTCATCCCATTGAAATTATTCTCTCTATGTTGATTAAAATCGCAGCGATAGGATTACTTGGTATTCCAGTT
GAAGCCGTCATTATTTTTGAAATCATTTTGAATGTCAGCGCGATGTTTAATCACAGTAATTTATTTATCCCACGTACACT
TGATCGATACATTCGAGGCTTATTAGTAACTCCTGATTTTCATAGAGTGCACCACTCTGTTCACATCTCTGAAATGCATA
ATAATTATGGTTTCTTTTTATCTATTTGGGACCGAATTGGAAATACTTATTTAGTAAAGCCCATTGATGGTCATGAGGAT
ATGAAGATTGGATTGGGATTTTTCAGAAAAGAAAGAGAACAGCGCTTAGATAAAATGCTGACCCAACCCTTTAGAAAGAA
ATAA

Upstream 100 bases:

>100_bases
AATGCGCATGAACAACAACCAAGCAATTTTATTTATATGGAAAAAAAAGCGCATTTTACTTACAGTATGAGTAATAACAA
GTTCTAAAGAGAAATTCCTA

Downstream 100 bases:

>100_bases
ACAAAAAAAGGCGATCCGAAGATCGCCTTTTTTATTTATAGATTATGTATTTCTAGCTAAATTTCTATATTGATTATGGT
GTATAGAACGTAGCTGCACC

Product: sterol desaturate

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Transmembrane Protein; C-5 Sterol Desaturase; Sterol Desaturase -Like Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Family Protein; Sterol Desaturate; TRAP Dicarboxylate Transporter DctM Subunit; Fatty Acid Hydroxylase Superfamily Protein; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MENNWIEYSDTLRFGFFVTAFIIFALAEYKWPRKALTQNKQFRWLNNIGLIFFNSIVLRLTLPLLAVDAALIANQEQFGL
FNYLNTPTFLTILLSILLLDWLIYWQHRAFHRIPLLWRLHRMHHSDQDIDVTTGTRFHPIEIILSMLIKIAAIGLLGIPV
EAVIIFEIILNVSAMFNHSNLFIPRTLDRYIRGLLVTPDFHRVHHSVHISEMHNNYGFFLSIWDRIGNTYLVKPIDGHED
MKIGLGFFRKEREQRLDKMLTQPFRKK

Sequences:

>Translated_267_residues
MENNWIEYSDTLRFGFFVTAFIIFALAEYKWPRKALTQNKQFRWLNNIGLIFFNSIVLRLTLPLLAVDAALIANQEQFGL
FNYLNTPTFLTILLSILLLDWLIYWQHRAFHRIPLLWRLHRMHHSDQDIDVTTGTRFHPIEIILSMLIKIAAIGLLGIPV
EAVIIFEIILNVSAMFNHSNLFIPRTLDRYIRGLLVTPDFHRVHHSVHISEMHNNYGFFLSIWDRIGNTYLVKPIDGHED
MKIGLGFFRKEREQRLDKMLTQPFRKK
>Mature_267_residues
MENNWIEYSDTLRFGFFVTAFIIFALAEYKWPRKALTQNKQFRWLNNIGLIFFNSIVLRLTLPLLAVDAALIANQEQFGL
FNYLNTPTFLTILLSILLLDWLIYWQHRAFHRIPLLWRLHRMHHSDQDIDVTTGTRFHPIEIILSMLIKIAAIGLLGIPV
EAVIIFEIILNVSAMFNHSNLFIPRTLDRYIRGLLVTPDFHRVHHSVHISEMHNNYGFFLSIWDRIGNTYLVKPIDGHED
MKIGLGFFRKEREQRLDKMLTQPFRKK

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31573; Mature: 31573

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNWIEYSDTLRFGFFVTAFIIFALAEYKWPRKALTQNKQFRWLNNIGLIFFNSIVLRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHH
TLPLLAVDAALIANQEQFGLFNYLNTPTFLTILLSILLLDWLIYWQHRAFHRIPLLWRLH
HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMHHSDQDIDVTTGTRFHPIEIILSMLIKIAAIGLLGIPVEAVIIFEIILNVSAMFNHSN
HHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
LFIPRTLDRYIRGLLVTPDFHRVHHSVHISEMHNNYGFFLSIWDRIGNTYLVKPIDGHED
EEECHHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHCCEEEEECCCCCCC
MKIGLGFFRKEREQRLDKMLTQPFRKK
HHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MENNWIEYSDTLRFGFFVTAFIIFALAEYKWPRKALTQNKQFRWLNNIGLIFFNSIVLRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHH
TLPLLAVDAALIANQEQFGLFNYLNTPTFLTILLSILLLDWLIYWQHRAFHRIPLLWRLH
HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMHHSDQDIDVTTGTRFHPIEIILSMLIKIAAIGLLGIPVEAVIIFEIILNVSAMFNHSN
HHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
LFIPRTLDRYIRGLLVTPDFHRVHHSVHISEMHNNYGFFLSIWDRIGNTYLVKPIDGHED
EEECHHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHCCEEEEECCCCCCC
MKIGLGFFRKEREQRLDKMLTQPFRKK
HHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA