| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yecA [C]
Identifier: 59712014
GI number: 59712014
Start: 1556979
End: 1557311
Strand: Direct
Name: yecA [C]
Synonym: VF_1407
Alternate gene names: 59712014
Gene position: 1556979-1557311 (Clockwise)
Preceding gene: 59712013
Following gene: 172087707
Centisome position: 53.73
GC content: 38.74
Gene sequence:
>333_bases ATGTCTAAAATGTTCTTCAAAGGTCGTATCGAGACTCGTCAAAACCACGTTCTTTCTGGTTACAACACTAAACGTGACGT TAAGTTAGGTACTGAAGAAGCACCATTAACTCTAGTTGTTCAAACTGAAGAGCGTAAAATCGAAGTTGAAGCCCAAGTTG CTGAGCATAAATTGTTTGCTAACATTGAAGTGAATGCAGAGAAAGAAGAAAATATTCTTGAGCTTGAAGGCGTATTAAAC AAGCCTAAGACAACTCGCTTTGAGAAAACACCTAACCGCAACGATCCTTGTTCTTGTGGTAGCGGTAAGAAATACAAAAA ATGCTGCGCTTAA
Upstream 100 bases:
>100_bases TACAACTAGGCCTGTTTTCTTTTCTAATCACTTTATCCAATCCCATGTTGATGGTATAAAGTGCCTAAAATACTGTGTTC TAAAATTATAAGGCTCCAAG
Downstream 100 bases:
>100_bases TAGCTAATTAACGTTAAGTTACTTAATTAAATCTAAGCGCATTACAAAAAAGAGCCTCTGTTTATCTGTTACTAATAACA AACAACATGAGGCTCTTTTT
Product: preprotein translocase subunit-like protein
Products: NA
Alternate protein names: SEC-C Motif Domain-Containing Protein; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein; ATPase
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSKMFFKGRIETRQNHVLSGYNTKRDVKLGTEEAPLTLVVQTEERKIEVEAQVAEHKLFANIEVNAEKEENILELEGVLN KPKTTRFEKTPNRNDPCSCGSGKKYKKCCA
Sequences:
>Translated_110_residues MSKMFFKGRIETRQNHVLSGYNTKRDVKLGTEEAPLTLVVQTEERKIEVEAQVAEHKLFANIEVNAEKEENILELEGVLN KPKTTRFEKTPNRNDPCSCGSGKKYKKCCA >Mature_109_residues SKMFFKGRIETRQNHVLSGYNTKRDVKLGTEEAPLTLVVQTEERKIEVEAQVAEHKLFANIEVNAEKEENILELEGVLNK PKTTRFEKTPNRNDPCSCGSGKKYKKCCA
Specific function: Unknown
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12544; Mature: 12412
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKMFFKGRIETRQNHVLSGYNTKRDVKLGTEEAPLTLVVQTEERKIEVEAQVAEHKLFA CCCCEECCCCCCCCCEEECCCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCEEEE NIEVNAEKEENILELEGVLNKPKTTRFEKTPNRNDPCSCGSGKKYKKCCA EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure SKMFFKGRIETRQNHVLSGYNTKRDVKLGTEEAPLTLVVQTEERKIEVEAQVAEHKLFA CCCEECCCCCCCCCEEECCCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCEEEE NIEVNAEKEENILELEGVLNKPKTTRFEKTPNRNDPCSCGSGKKYKKCCA EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA