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The map label for this gene is cinA [H]

Identifier: 172087669

GI number: 172087669

Start: 576737

End: 577234

Strand: Direct

Name: cinA [H]

Synonym: VF_2591

Alternate gene names: 172087669

Gene position: 576737-577234 (Clockwise)

Preceding gene: 59711136

Following gene: 59711142

Centisome position: 19.9

GC content: 38.96

Gene sequence:

>498_bases
ATGGATATGACGCAAAACATACAGTTAGCACAAAAAGTGGGTGAATTATTAGTACATCAAGAAAAAATGATGTCATGTTC
AGAATCATGTACCGGTGGTGGCGTTGCGTTTTGTGCAACTGAAAATGCTGGAAGTTCAGCTTGGTTTGACCGTGGTTTTG
TTACTTATAGCAATGAGGCAAAACAAGATTCATTAGGGGTAAAACTAGATACCTTAATACGTTATGGCGCGGTTAGTGAA
GAAGTTGTAAGAGAGATGGCTGACGGTGCATTATTAAACAGTAAATCTGATATTACGGTTTCAATCAGCGGTATTGCAGG
GCCCGGTGGAGCAACGGAAGATAAGCCTGTTGGAACGGTATGTTTTGGTTTTGCAGATAAGAATGAGTGGAGCAATGAAA
CTACTGTATATTTTACTGGTGATCGCAGTGAAGTTAGAATGAAAGCGATAGAATATGCATTTCTTACAATCAAGAATCGC
TTAGAAGAGCTTAATTAA

Upstream 100 bases:

>100_bases
CCTAATAAGTGAAGAATACATTTGGTGCTAAGAATACGTGAATCGAGACGGCAATCAAAGATAGAATAGATAAATTTCGA
ATTAAGATGGGAAGAATCTA

Downstream 100 bases:

>100_bases
TTCAATTAGTTAGTTTGTTGTGTCGTGATATTGCTCAGAAAAAATTAGAAAAAAAATAGCAAAGCTATAGACACTGTACA
AATAGACAGTATACTACTGG

Product: CinA-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MDMTQNIQLAQKVGELLVHQEKMMSCSESCTGGGVAFCATENAGSSAWFDRGFVTYSNEAKQDSLGVKLDTLIRYGAVSE
EVVREMADGALLNSKSDITVSISGIAGPGGATEDKPVGTVCFGFADKNEWSNETTVYFTGDRSEVRMKAIEYAFLTIKNR
LEELN

Sequences:

>Translated_165_residues
MDMTQNIQLAQKVGELLVHQEKMMSCSESCTGGGVAFCATENAGSSAWFDRGFVTYSNEAKQDSLGVKLDTLIRYGAVSE
EVVREMADGALLNSKSDITVSISGIAGPGGATEDKPVGTVCFGFADKNEWSNETTVYFTGDRSEVRMKAIEYAFLTIKNR
LEELN
>Mature_165_residues
MDMTQNIQLAQKVGELLVHQEKMMSCSESCTGGGVAFCATENAGSSAWFDRGFVTYSNEAKQDSLGVKLDTLIRYGAVSE
EVVREMADGALLNSKSDITVSISGIAGPGGATEDKPVGTVCFGFADKNEWSNETTVYFTGDRSEVRMKAIEYAFLTIKNR
LEELN

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=161, Percent_Identity=50.3105590062112, Blast_Score=150, Evalue=4e-38,
Organism=Escherichia coli, GI1787818, Length=147, Percent_Identity=36.0544217687075, Blast_Score=90, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 17887; Mature: 17887

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTQNIQLAQKVGELLVHQEKMMSCSESCTGGGVAFCATENAGSSAWFDRGFVTYSNEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEECCCEEEECCCC
KQDSLGVKLDTLIRYGAVSEEVVREMADGALLNSKSDITVSISGIAGPGGATEDKPVGTV
CCCCCCCCHHHHHHHCCCCHHHHHHHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCEE
CFGFADKNEWSNETTVYFTGDRSEVRMKAIEYAFLTIKNRLEELN
EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMTQNIQLAQKVGELLVHQEKMMSCSESCTGGGVAFCATENAGSSAWFDRGFVTYSNEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEECCCEEEECCCC
KQDSLGVKLDTLIRYGAVSEEVVREMADGALLNSKSDITVSISGIAGPGGATEDKPVGTV
CCCCCCCCHHHHHHHCCCCHHHHHHHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCEE
CFGFADKNEWSNETTVYFTGDRSEVRMKAIEYAFLTIKNRLEELN
EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]