| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is dgkA [H]
Identifier: 172087661
GI number: 172087661
Start: 447954
End: 448340
Strand: Reverse
Name: dgkA [H]
Synonym: VF_0418
Alternate gene names: 172087661
Gene position: 448340-447954 (Counterclockwise)
Preceding gene: 172087662
Following gene: 59711024
Centisome position: 15.47
GC content: 41.34
Gene sequence:
>387_bases ATGACAGACGTACCATCAGGTAAACCAGGGAACACTGGGATCAAACGCATTATTAAAGCTACTGGATTCTCAATCCAAGG GTTAAAAGCCGCATTCAAACATGAAGCAGCCGTTCGCCAAGAATTTGCTATGTTAGTTATTGCCACGCCTATCGCTTTAC TGCTGGATGTCACTGTCGTTGAAAAAATCTTATTAGTTGGTGTGTTTGTTCTGATCTTTATGATTGAGCTTTTAAACTCA GCTATTGAAGCGGTAGTTGACCGTATAGGGCCAGAACACCACGAATTAAGTGGAAGAGCCAAAGATATTGGTTCTGCGGC TGTATTCGTCGCTCTGTGCTTTGCAGGCTTTACTTGGTTAATGATTTTAGGAAGTCATTATCTTTAA
Upstream 100 bases:
>100_bases CCTCATCATCTGATGAGGCTTTTTTTATGCTTGTCATTTCTTAATCTCAGCACTACCATACCCCACTCCTTTGTATTATG TATATCGTTAAGGCTATATC
Downstream 100 bases:
>100_bases TACCAATTCTAATAATTATTAAGGCATATTTAAATGAATCCAATTATTCAAACACTAAAAGAACATAATGTAAGCGATGA ACAAATCGCAGAAGTGTTCC
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTDVPSGKPGNTGIKRIIKATGFSIQGLKAAFKHEAAVRQEFAMLVIATPIALLLDVTVVEKILLVGVFVLIFMIELLNS AIEAVVDRIGPEHHELSGRAKDIGSAAVFVALCFAGFTWLMILGSHYL
Sequences:
>Translated_128_residues MTDVPSGKPGNTGIKRIIKATGFSIQGLKAAFKHEAAVRQEFAMLVIATPIALLLDVTVVEKILLVGVFVLIFMIELLNS AIEAVVDRIGPEHHELSGRAKDIGSAAVFVALCFAGFTWLMILGSHYL >Mature_127_residues TDVPSGKPGNTGIKRIIKATGFSIQGLKAAFKHEAAVRQEFAMLVIATPIALLLDVTVVEKILLVGVFVLIFMIELLNSA IEAVVDRIGPEHHELSGRAKDIGSAAVFVALCFAGFTWLMILGSHYL
Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=119, Percent_Identity=53.781512605042, Blast_Score=133, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 13761; Mature: 13629
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS01069 DAGK_PROKAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVPSGKPGNTGIKRIIKATGFSIQGLKAAFKHEAAVRQEFAMLVIATPIALLLDVTVV CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKILLVGVFVLIFMIELLNSAIEAVVDRIGPEHHELSGRAKDIGSAAVFVALCFAGFTWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH MILGSHYL HHHHHCCC >Mature Secondary Structure TDVPSGKPGNTGIKRIIKATGFSIQGLKAAFKHEAAVRQEFAMLVIATPIALLLDVTVV CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKILLVGVFVLIFMIELLNSAIEAVVDRIGPEHHELSGRAKDIGSAAVFVALCFAGFTWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH MILGSHYL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]