| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is rhlB [H]
Identifier: 172087635
GI number: 172087635
Start: 62980
End: 64278
Strand: Reverse
Name: rhlB [H]
Synonym: VF_0056
Alternate gene names: 172087635
Gene position: 64278-62980 (Counterclockwise)
Preceding gene: 59710670
Following gene: 59710661
Centisome position: 2.22
GC content: 43.73
Gene sequence:
>1299_bases ATGAAAAAGACGCACATCACAGAGCAAAACTTTGCCGACCTAGGTTTACAGCCTCAGGTTATCGATGGTTTGAATGCAAA AGGGTTCATCAAATGTACCCCAATTCAAGCTAAGGCATTGCCGGTACTGCTCGCCGGCCAAGACATTGCAGGCCAGGCCC AAACGGGTACAGGTAAGACGCTAGCGTTCCTTACTGCTACTTTTAATCACCTATTAACGACACCAGCACCTGAAGGTCGT AAAATCACACAACCGCGTGCCATTATCATGGCTCCGACACGTGAATTAGCGATTCAAATCTTCAATGATGCTGAATCACT TATCGCAAGTACAGGCCTAAAAGCGGCACTGGCTTACGGTGGTGAGCGTTATGAAAAACAACAACAAGTGATTGAGCAAG GTGTTGATATTTTGATCGGTACAACCGGTCGTATTATCGACTTTTACAAGCAAGGTCACATCGACTTTAAGATGATTCAA GCTGTTGTTCTTGATGAAGCCGATCGTATGTTCGATTTAGGTTTTATTAAAGATATTCGCTTTATCTTCCGTCGTATGCC TGCGCCAACAGAGCGTTTAAACATGCTGTTCTCTGCTACGTTATCTTACCGTGTGCAAGAGCTTGCGTTTGAACACATGC AAGAGCCAGAGCACGTTGTTGTTGAGCCAGAACAAAAAACAGGTCATCGCATTAAGGAAGAGCTTTTCTATCCTTCAAAT GATCATAAAATGGCATTACTTCAAACACTTATTGAAGAAGAATGGCCAGATCGTGCGATTATCTTTGCAAACACAAAACA CAAATGTGAATCAGTTTGGGGTCACCTAGCTGCTGATAAACACCGTGTTGGTCTTCTAACTGGTGACGTTCCTCAGAAAA AACGTGAGCGCATTTTAGAAGAGTTCACACAAGGTAATGTTGATATCTTAGTTGCTACCGATGTGGCTGCTCGTGGTCTA CATATTCCACAAGTAACGCATGTGTTTAACTTTGATTTACCAAACGAAGCAGAAGATTACGTTCACCGTATTGGCCGTAC AGGTCGTGCAGGTGCAAGCGGTAACTCTATTAGCTTCGCATGTGAAGAATACGCAATTAACCTTCCTGCTATCGAAGAAT ATATTGAGCATTCTATTCCACAATCTGATTACGACGCTTCGGCATTACTAGAAGATTTGCCAGCTCCACTACGACTTCAA CGTCGTCCACAGCAAAATCGTCGTAATAACAATGGTCAACGTCAAGGCGGCAACCGTAAGCATACTCGCCCACGTCAACC ACGTAATACTCAGTCGTAA
Upstream 100 bases:
>100_bases CGTTAAATTTAAAGGCTGATTTGATGATAACCAGCAAATTGATTCTCTATTTGAATGGAATCCGTTTCGTATTGCAAGCT TTAACTGATATTCTATAGCA
Downstream 100 bases:
>100_bases ATTGAGCGCTCAGTAAAAAAGTAAAAGGATGTTATGAAAAGTTCAACAATGTCACCAATGTATGCCGCCATCGATTTAGG CTCCAATAGCTTCCATATGC
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKKTHITEQNFADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAPEGR KITQPRAIIMAPTRELAIQIFNDAESLIASTGLKAALAYGGERYEKQQQVIEQGVDILIGTTGRIIDFYKQGHIDFKMIQ AVVLDEADRMFDLGFIKDIRFIFRRMPAPTERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPEQKTGHRIKEELFYPSN DHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADKHRVGLLTGDVPQKKRERILEEFTQGNVDILVATDVAARGL HIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGASGNSISFACEEYAINLPAIEEYIEHSIPQSDYDASALLEDLPAPLRLQ RRPQQNRRNNNGQRQGGNRKHTRPRQPRNTQS
Sequences:
>Translated_432_residues MKKTHITEQNFADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAPEGR KITQPRAIIMAPTRELAIQIFNDAESLIASTGLKAALAYGGERYEKQQQVIEQGVDILIGTTGRIIDFYKQGHIDFKMIQ AVVLDEADRMFDLGFIKDIRFIFRRMPAPTERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPEQKTGHRIKEELFYPSN DHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADKHRVGLLTGDVPQKKRERILEEFTQGNVDILVATDVAARGL HIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGASGNSISFACEEYAINLPAIEEYIEHSIPQSDYDASALLEDLPAPLRLQ RRPQQNRRNNNGQRQGGNRKHTRPRQPRNTQS >Mature_432_residues MKKTHITEQNFADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAPEGR KITQPRAIIMAPTRELAIQIFNDAESLIASTGLKAALAYGGERYEKQQQVIEQGVDILIGTTGRIIDFYKQGHIDFKMIQ AVVLDEADRMFDLGFIKDIRFIFRRMPAPTERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPEQKTGHRIKEELFYPSN DHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADKHRVGLLTGDVPQKKRERILEEFTQGNVDILVATDVAARGL HIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGASGNSISFACEEYAINLPAIEEYIEHSIPQSDYDASALLEDLPAPLRLQ RRPQQNRRNNNGQRQGGNRKHTRPRQPRNTQS
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=37.6693766937669, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=36.3380281690141, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=36.3380281690141, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=36.3380281690141, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=36.3380281690141, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=34.6883468834688, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=34.6883468834688, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI148613856, Length=344, Percent_Identity=37.5, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI38201710, Length=344, Percent_Identity=37.5, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=34.5108695652174, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=34.5108695652174, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=34.5108695652174, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=35.8757062146893, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI55749865, Length=408, Percent_Identity=33.578431372549, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=34.4647519582245, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI164419743, Length=364, Percent_Identity=34.6153846153846, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI51094101, Length=364, Percent_Identity=34.6153846153846, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI7661920, Length=384, Percent_Identity=32.8125, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI21071032, Length=372, Percent_Identity=34.1397849462366, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI45446747, Length=347, Percent_Identity=33.1412103746398, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI45446743, Length=347, Percent_Identity=33.1412103746398, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI224593278, Length=358, Percent_Identity=35.195530726257, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=33.6898395721925, Blast_Score=198, Evalue=6e-51, Organism=Homo sapiens, GI41327773, Length=362, Percent_Identity=33.4254143646409, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI50659095, Length=411, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI8922886, Length=393, Percent_Identity=34.3511450381679, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI13129006, Length=363, Percent_Identity=34.435261707989, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI6005743, Length=393, Percent_Identity=34.0966921119593, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI83700235, Length=385, Percent_Identity=33.2467532467532, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=30.7692307692308, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI41327776, Length=374, Percent_Identity=32.3529411764706, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI17505907, Length=425, Percent_Identity=30.5882352941176, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI4503529, Length=385, Percent_Identity=33.5064935064935, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI62241022, Length=374, Percent_Identity=33.9572192513369, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI41327779, Length=391, Percent_Identity=32.4808184143223, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI4758112, Length=362, Percent_Identity=29.5580110497238, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI18375623, Length=362, Percent_Identity=29.5580110497238, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI31542656, Length=395, Percent_Identity=32.1518987341772, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI21040371, Length=362, Percent_Identity=29.5580110497238, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI188035877, Length=356, Percent_Identity=30.6179775280899, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI13514831, Length=359, Percent_Identity=30.08356545961, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38327634, Length=400, Percent_Identity=30.25, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI62241024, Length=353, Percent_Identity=33.4277620396601, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=32.9758713136729, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI38569503, Length=373, Percent_Identity=30.2949061662198, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI38569505, Length=373, Percent_Identity=30.2949061662198, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI256773275, Length=394, Percent_Identity=29.9492385786802, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI256223453, Length=396, Percent_Identity=26.7676767676768, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI9506931, Length=408, Percent_Identity=26.9607843137255, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI9966805, Length=314, Percent_Identity=30.2547770700637, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=35.4545454545455, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=31.25, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI154759257, Length=410, Percent_Identity=25.609756097561, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI1790214, Length=423, Percent_Identity=71.6312056737589, Blast_Score=632, Evalue=0.0, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=37.2654155495979, Blast_Score=261, Evalue=7e-71, Organism=Escherichia coli, GI87082221, Length=387, Percent_Identity=37.7260981912145, Blast_Score=251, Evalue=4e-68, Organism=Escherichia coli, GI1788930, Length=360, Percent_Identity=38.3333333333333, Blast_Score=228, Evalue=5e-61, Organism=Escherichia coli, GI1787605, Length=353, Percent_Identity=35.1274787535411, Blast_Score=207, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=38.5674931129477, Blast_Score=240, Evalue=8e-64, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=39.6694214876033, Blast_Score=239, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=39.6694214876033, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=39.6694214876033, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71995724, Length=375, Percent_Identity=32.8, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507121, Length=375, Percent_Identity=32.8, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=32.9787234042553, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=35.5555555555556, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI71987143, Length=376, Percent_Identity=32.7127659574468, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI86570094, Length=361, Percent_Identity=34.3490304709141, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=34.9162011173184, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI115533224, Length=366, Percent_Identity=34.4262295081967, Blast_Score=198, Evalue=6e-51, Organism=Caenorhabditis elegans, GI17507877, Length=376, Percent_Identity=33.7765957446808, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17510559, Length=382, Percent_Identity=31.151832460733, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17537549, Length=380, Percent_Identity=34.2105263157895, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=33.6842105263158, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71999646, Length=363, Percent_Identity=32.5068870523416, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71999644, Length=363, Percent_Identity=32.7823691460055, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17507945, Length=341, Percent_Identity=33.7243401759531, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=33.4231805929919, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17509811, Length=392, Percent_Identity=31.3775510204082, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI115532548, Length=381, Percent_Identity=30.9711286089239, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI115532546, Length=381, Percent_Identity=30.9711286089239, Blast_Score=168, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=30.9973045822102, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=31.2997347480106, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17508543, Length=361, Percent_Identity=28.5318559556787, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17505370, Length=362, Percent_Identity=32.0441988950276, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI71990816, Length=359, Percent_Identity=34.2618384401114, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17507641, Length=381, Percent_Identity=30.1837270341207, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71982858, Length=393, Percent_Identity=28.2442748091603, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=30.4582210242588, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=29.1316526610644, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17536099, Length=403, Percent_Identity=31.0173697270471, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=30.5210918114144, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17536103, Length=412, Percent_Identity=30.5825242718447, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17553716, Length=371, Percent_Identity=27.2237196765499, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25148203, Length=413, Percent_Identity=23.4866828087167, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=29.8192771084337, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71997889, Length=439, Percent_Identity=26.4236902050114, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17556951, Length=366, Percent_Identity=27.3224043715847, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71987152, Length=106, Percent_Identity=40.5660377358491, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71982862, Length=213, Percent_Identity=28.169014084507, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17557982, Length=377, Percent_Identity=22.0159151193634, Blast_Score=82, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6324778, Length=423, Percent_Identity=35.9338061465721, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6325138, Length=440, Percent_Identity=34.7727272727273, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=37.0473537604457, Blast_Score=230, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=36.1643835616438, Blast_Score=217, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=380, Percent_Identity=35.5263157894737, Blast_Score=212, Evalue=9e-56, Organism=Saccharomyces cerevisiae, GI6321856, Length=416, Percent_Identity=34.1346153846154, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=32.967032967033, Blast_Score=189, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=396, Percent_Identity=33.8383838383838, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6323947, Length=363, Percent_Identity=33.8842975206612, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320173, Length=435, Percent_Identity=30.1149425287356, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320449, Length=350, Percent_Identity=33.1428571428571, Blast_Score=182, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6322912, Length=383, Percent_Identity=33.1592689295039, Blast_Score=182, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6322323, Length=383, Percent_Identity=33.1592689295039, Blast_Score=182, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=30.9782608695652, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=33.5180055401662, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6321963, Length=426, Percent_Identity=29.1079812206573, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=419, Percent_Identity=29.8329355608592, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6319714, Length=379, Percent_Identity=29.5514511873351, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=368, Percent_Identity=32.3369565217391, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=29.1105121293801, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320119, Length=397, Percent_Identity=27.9596977329975, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=27.0983213429257, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=449, Percent_Identity=28.7305122494432, Blast_Score=133, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=23.696682464455, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6324366, Length=346, Percent_Identity=23.9884393063584, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=36.7521367521368, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=36.3881401617251, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=35.1123595505618, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI21355075, Length=369, Percent_Identity=37.940379403794, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI21356161, Length=361, Percent_Identity=36.8421052631579, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24642151, Length=360, Percent_Identity=35.5555555555556, Blast_Score=212, Evalue=3e-55, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=36.5439093484419, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=33.6870026525199, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=33.6870026525199, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=33.6870026525199, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=33.6870026525199, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=33.6870026525199, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=33.6870026525199, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=33.6870026525199, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24584994, Length=380, Percent_Identity=34.2105263157895, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24645031, Length=384, Percent_Identity=32.2916666666667, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI18857967, Length=368, Percent_Identity=33.695652173913, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI17977678, Length=354, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI28575014, Length=381, Percent_Identity=30.1837270341207, Blast_Score=187, Evalue=9e-48, Organism=Drosophila melanogaster, GI24585582, Length=373, Percent_Identity=33.2439678284182, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24582080, Length=380, Percent_Identity=32.1052631578947, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24582078, Length=380, Percent_Identity=32.1052631578947, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI17136248, Length=380, Percent_Identity=32.1052631578947, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24582075, Length=380, Percent_Identity=32.1052631578947, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=31.3672922252011, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136814, Length=416, Percent_Identity=32.6923076923077, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI28571808, Length=364, Percent_Identity=32.6923076923077, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI28571809, Length=364, Percent_Identity=32.6923076923077, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=35.3503184713376, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24583281, Length=376, Percent_Identity=29.5212765957447, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI24583279, Length=376, Percent_Identity=29.5212765957447, Blast_Score=167, Evalue=9e-42, Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=29.6551724137931, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24581954, Length=363, Percent_Identity=30.3030303030303, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581952, Length=363, Percent_Identity=30.3030303030303, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581956, Length=363, Percent_Identity=30.3030303030303, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI17647335, Length=363, Percent_Identity=30.0275482093664, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI19920478, Length=349, Percent_Identity=30.6590257879656, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24642822, Length=390, Percent_Identity=28.974358974359, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI21355559, Length=408, Percent_Identity=30.3921568627451, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=26.5822784810127, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=31.8452380952381, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI28571338, Length=231, Percent_Identity=30.7359307359307, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI18859659, Length=231, Percent_Identity=30.7359307359307, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24640164, Length=362, Percent_Identity=22.0994475138122, Blast_Score=89, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48635; Mature: 48635
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTHITEQNFADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKT CCCCCCCCCCHHHCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC LAFLTATFNHLLTTPAPEGRKITQPRAIIMAPTRELAIQIFNDAESLIASTGLKAALAYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCHHHHHHHC GERYEKQQQVIEQGVDILIGTTGRIIDFYKQGHIDFKMIQAVVLDEADRMFDLGFIKDIR CHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FIFRRMPAPTERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPEQKTGHRIKEELFYPSN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCC DHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADKHRVGLLTGDVPQKKRERILE CCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH EFTQGNVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGASGNSISFA HHHCCCEEEEEEECHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEE CEEYAINLPAIEEYIEHSIPQSDYDASALLEDLPAPLRLQRRPQQNRRNNNGQRQGGNRK EHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCCCC HTRPRQPRNTQS CCCCCCCCCCCC >Mature Secondary Structure MKKTHITEQNFADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKT CCCCCCCCCCHHHCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC LAFLTATFNHLLTTPAPEGRKITQPRAIIMAPTRELAIQIFNDAESLIASTGLKAALAYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCHHHHHHHC GERYEKQQQVIEQGVDILIGTTGRIIDFYKQGHIDFKMIQAVVLDEADRMFDLGFIKDIR CHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FIFRRMPAPTERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPEQKTGHRIKEELFYPSN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCC DHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADKHRVGLLTGDVPQKKRERILE CCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH EFTQGNVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGASGNSISFA HHHCCCEEEEEEECHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEE CEEYAINLPAIEEYIEHSIPQSDYDASALLEDLPAPLRLQRRPQQNRRNNNGQRQGGNRK EHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCCCC HTRPRQPRNTQS CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA