| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617560
Identifier: 58617560
GI number: 58617560
Start: 1337123
End: 1337734
Strand: Reverse
Name: 58617560
Synonym: ERGA_CDS_08330
Alternate gene names: NA
Gene position: 1337734-1337123 (Counterclockwise)
Preceding gene: 58617561
Following gene: 58617559
Centisome position: 89.19
GC content: 29.25
Gene sequence:
>612_bases TTGCCTAAGGTGACAAATGATTTTATCGATAAAATTAGTACTCATAGGTTTTCTGATGAACTTGTACAATTGCCGGAGTT AGTAGATTTATTACACAAATATGAAATGTCTATACGCGACTTTATAAAGGGATTAGTTGATGTATCTGATGATGATATAA TAAATAGTTTAGGTAATATATCAACAGTATATAAAGGGTTAGGTAATACATTAAATAAAGAGAGTGTAAAAAAGGCTTTT GCTAATGCAGGTATAACAAATTCTGTTAATGAAATAAGATTGTTATTTGATGCAGTAATAATTAATTATCTACTTTCAGA TTCGACTCCATTTAAGAAATTGCTTATTGATGTTAAGACAACATCCAGTATAGATAAAAAAATGCTAATAATGCAAAGCA TGGGTAATGTTGATTTATCAGTTTTGAAACAAGATGTCATGGATATGGCATATGGGGAACATAGTAGCCACAGGTTTAAT ATAGTGGTACTTTGGTGTTATATGATAAATAATCGGCATTATTATCGTAATTTTACTGAAAGGTATTTCGATCCTCTTGT AAAGTTAGTATTAGGGGAAAATGTAAAAGAGTCTACTAATGAGAAAAGGTAA
Upstream 100 bases:
>100_bases GTTAGATCAGGATCTACAAAAGCTTAGTGATGCTAGTGAAAAGTCTACATAACAAATACTTGCTGAGCTTATTGATAACA TTAAGAAATATAGGAATAAA
Downstream 100 bases:
>100_bases TTTACTGGGTTTATTAATAAAATTAGTAAATACAAAGATATGTTGCCTGATGGTATAAATGATTTTATCGCTAAAATTAG TACTAAGGAATTTTATAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPKVTNDFIDKISTHRFSDELVQLPELVDLLHKYEMSIRDFIKGLVDVSDDDIINSLGNISTVYKGLGNTLNKESVKKAF ANAGITNSVNEIRLLFDAVIINYLLSDSTPFKKLLIDVKTTSSIDKKMLIMQSMGNVDLSVLKQDVMDMAYGEHSSHRFN IVVLWCYMINNRHYYRNFTERYFDPLVKLVLGENVKESTNEKR
Sequences:
>Translated_203_residues MPKVTNDFIDKISTHRFSDELVQLPELVDLLHKYEMSIRDFIKGLVDVSDDDIINSLGNISTVYKGLGNTLNKESVKKAF ANAGITNSVNEIRLLFDAVIINYLLSDSTPFKKLLIDVKTTSSIDKKMLIMQSMGNVDLSVLKQDVMDMAYGEHSSHRFN IVVLWCYMINNRHYYRNFTERYFDPLVKLVLGENVKESTNEKR >Mature_202_residues PKVTNDFIDKISTHRFSDELVQLPELVDLLHKYEMSIRDFIKGLVDVSDDDIINSLGNISTVYKGLGNTLNKESVKKAFA NAGITNSVNEIRLLFDAVIINYLLSDSTPFKKLLIDVKTTSSIDKKMLIMQSMGNVDLSVLKQDVMDMAYGEHSSHRFNI VVLWCYMINNRHYYRNFTERYFDPLVKLVLGENVKESTNEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23335; Mature: 23204
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVTNDFIDKISTHRFSDELVQLPELVDLLHKYEMSIRDFIKGLVDVSDDDIINSLGNI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH STVYKGLGNTLNKESVKKAFANAGITNSVNEIRLLFDAVIINYLLSDSTPFKKLLIDVKT HHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TSSIDKKMLIMQSMGNVDLSVLKQDVMDMAYGEHSSHRFNIVVLWCYMINNRHYYRNFTE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHEEEEEHHHCCCHHHHHHHH RYFDPLVKLVLGENVKESTNEKR HHHHHHHHHHHCCCHHHCCCCCC >Mature Secondary Structure PKVTNDFIDKISTHRFSDELVQLPELVDLLHKYEMSIRDFIKGLVDVSDDDIINSLGNI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH STVYKGLGNTLNKESVKKAFANAGITNSVNEIRLLFDAVIINYLLSDSTPFKKLLIDVKT HHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TSSIDKKMLIMQSMGNVDLSVLKQDVMDMAYGEHSSHRFNIVVLWCYMINNRHYYRNFTE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHEEEEEHHHCCCHHHHHHHH RYFDPLVKLVLGENVKESTNEKR HHHHHHHHHHHCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA