| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617496
Identifier: 58617496
GI number: 58617496
Start: 1231153
End: 1231638
Strand: Reverse
Name: 58617496
Synonym: ERGA_CDS_07690
Alternate gene names: NA
Gene position: 1231638-1231153 (Counterclockwise)
Preceding gene: 58617498
Following gene: 58617495
Centisome position: 82.11
GC content: 35.19
Gene sequence:
>486_bases ATGGTAGTTATAAGTATTATGTCTCTCTTATTCAAAATAAAGGATTCTATATTAAGTACTAGAGATAAGATTATAGCTGT GTTTACGCCAGAAGGTGAGGAGGCTATACAGCATACAGATGATAATGTGAAAAACAGGTACTTGCTTTCTATTGTTTTAG AGTTTATTGTTGTTGTTCTGTTAGTATGTGTTCTTGTTCCTATTTTATTTTGTGCTTGTGTGTGGCTTGGTATTTTTGAT TGTTTTAGGAATACATGTTGTGTGATACCTGAAGAAGATGATTCTGATCATCCTACTTCTCCTCAGCTATTAAGTGATAA TGGTTCCGATTATAGTAGTGGGTTAGATAACTCTTCAGAAGAAATACCAAATAAAGGAGAAATTCCTGATTTTGTGCCTG GGGAAGATCGAGGAAGTGGTGATTCGTTTACAGTACTTTCCCCTTGTAGTGTGGAAGGCTGTCGAGAGAGAATCAATATG AAATAG
Upstream 100 bases:
>100_bases TTTAGTTATTTATTTTAGAGTGTACTTAAGATCATTGTATATAACCTTTTTGTTGAAAAATATGTGGTTTGATGGTAACA TATGTATATGGTTATAAGAT
Downstream 100 bases:
>100_bases GTGTTTATTTATTAGTTAAATTATTTTGATTTTATTAGATTCTAGTTATTTGTATGTTTGTAGAGAATTGATGGGTATGT GTGGCACACTGGTATAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MVVISIMSLLFKIKDSILSTRDKIIAVFTPEGEEAIQHTDDNVKNRYLLSIVLEFIVVVLLVCVLVPILFCACVWLGIFD CFRNTCCVIPEEDDSDHPTSPQLLSDNGSDYSSGLDNSSEEIPNKGEIPDFVPGEDRGSGDSFTVLSPCSVEGCRERINM K
Sequences:
>Translated_161_residues MVVISIMSLLFKIKDSILSTRDKIIAVFTPEGEEAIQHTDDNVKNRYLLSIVLEFIVVVLLVCVLVPILFCACVWLGIFD CFRNTCCVIPEEDDSDHPTSPQLLSDNGSDYSSGLDNSSEEIPNKGEIPDFVPGEDRGSGDSFTVLSPCSVEGCRERINM K >Mature_161_residues MVVISIMSLLFKIKDSILSTRDKIIAVFTPEGEEAIQHTDDNVKNRYLLSIVLEFIVVVLLVCVLVPILFCACVWLGIFD CFRNTCCVIPEEDDSDHPTSPQLLSDNGSDYSSGLDNSSEEIPNKGEIPDFVPGEDRGSGDSFTVLSPCSVEGCRERINM K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17792; Mature: 17792
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVISIMSLLFKIKDSILSTRDKIIAVFTPEGEEAIQHTDDNVKNRYLLSIVLEFIVVVL CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH LVCVLVPILFCACVWLGIFDCFRNTCCVIPEEDDSDHPTSPQLLSDNGSDYSSGLDNSSE HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCCCHHCCCCCCHH EIPNKGEIPDFVPGEDRGSGDSFTVLSPCSVEGCRERINMK HCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCC >Mature Secondary Structure MVVISIMSLLFKIKDSILSTRDKIIAVFTPEGEEAIQHTDDNVKNRYLLSIVLEFIVVVL CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH LVCVLVPILFCACVWLGIFDCFRNTCCVIPEEDDSDHPTSPQLLSDNGSDYSSGLDNSSE HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCCCHHCCCCCCHH EIPNKGEIPDFVPGEDRGSGDSFTVLSPCSVEGCRERINMK HCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA