| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
Click here to switch to the map view.
The map label for this gene is 58617498
Identifier: 58617498
GI number: 58617498
Start: 1232760
End: 1234163
Strand: Reverse
Name: 58617498
Synonym: ERGA_CDS_07710
Alternate gene names: NA
Gene position: 1234163-1232760 (Counterclockwise)
Preceding gene: 58617500
Following gene: 58617496
Centisome position: 82.28
GC content: 36.04
Gene sequence:
>1404_bases TTGCGTAAAAAGATTAAGAAAGTATTAATTTCTGGTAAAAGTGTTTGGCCAATAATAGAAGGTGGTAAAGGTATTGGTGT AAGTGACGGTAGAACGGCAGGTGCTTTTGCTGCTGCATCTGCTGTTGGTACATTTTCTGGTGCATGTGCTAAATTCTTAG ATCAAAATGGAGAGTATGTGCCTTTAATATATCGTGGTAAAACTAGATTAGAACGTCATGATGAATTGATAAGCTATAGT ATTGATGCAGCAGTGAGTCAGGCTAAAGTAGCACATGATATATCTGCTGGTTTGGGTAGAATACATATGAATATATTGTG GGAAATGGGTGGTGCACAGAAAATTCTTCATGGTGTTCTTGAAAAGGCTAAAGGATTAATTCATGGTATTACTTGTGGTG CTGGGATGCCATATAAGTTGGCGGAAATAGCTTCTCAATATCAAGTGTATTACTATCCTATTGTTTCATCTGCTAGAGCA TTTAAAATTCTGTGGCAGAGATCTTATCAGAAGTTTTCTAAAATACTTCTTGGTGGTGTTGTGTATGAAGATCCTTGGTT GGCTGGGGGGCACAATGGTCTTAGTAATAGTGAGTCACCTGACAATCCTCAAATGCCTTTTGAGAGGGTTGCAGCAATTC GTAAGTATATGAATGAGGTTGGACTGTCAGATGTTACATTAATTATGGCAGGGGGTGTATGGCATTTAAAGGATTGGGAA TCGTGGTTTGACAATAGCTTAATTGGTCCTATAGCATTTCAATTTGGAACAAGACCTTTATTAACACAGGAAAGTCCTAT ATCTGCTGCTTGGAAAAAAAAATTAATGTCCTTAAAACCTGGAGATGTATTTTTAAATAAATTTAGTCCTACGGGGTTTT ATTCTTCTGCAGTTAGAAATGAGTTTATTAAGGAATTACAGGAACGTAATGCACGTCAAATTGCATTTGAAGAACAAATC AGTGAAAGATGCAGTGCTGAATTGACTATTGGTAGTAGGGGAAGAAAGGTATACGTGCATCCAGATGATAAAAAATTATC AGAACTTTGGATATCTATGGGTTATACTGATACTTTAAAGACTCCGGATAATACCCTAGTGTTTGTTACTCAAAGTAAAT CGAAAAGCATTAGAGAAGACCAGATAAATTGTATGGGATGTTTAAGTCACTGTAGGTTTAGTAATTGGAAGGACCATGGG GATTATAATACTGGTATCAAACCAGATGTTCGTAGTTTTTGTATTCAAAAAACATTACAAAATATTATTGCTGGGGTGGA TCATGAGTATGAACTCATGTTTTCTGGACACAATGCTTATAAATTTGTAGAAGATGAGTTCTATAAGGATGGTTATATAC CGACAGTTAGAGAACTTGTTGACAGGATTTTAACTGGATATTAG
Upstream 100 bases:
>100_bases TGATTATGATCTTGTGAGTTTGTAAAAAAAGTGATAAAAATAACTGCTTAAATTTTGTTAATAATAAGTAATATCACTGT TAATTGATTAAGGGTTTGCT
Downstream 100 bases:
>100_bases TGAGTGTTTTTATACAGGATAGAGTGAGCTTTGCTGTTTATACTTTACAAAATAAATTAGTAATGTAATTTTTCACATTT ACATTGTATCAATACAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase; Flavin-Containing Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MRKKIKKVLISGKSVWPIIEGGKGIGVSDGRTAGAFAAASAVGTFSGACAKFLDQNGEYVPLIYRGKTRLERHDELISYS IDAAVSQAKVAHDISAGLGRIHMNILWEMGGAQKILHGVLEKAKGLIHGITCGAGMPYKLAEIASQYQVYYYPIVSSARA FKILWQRSYQKFSKILLGGVVYEDPWLAGGHNGLSNSESPDNPQMPFERVAAIRKYMNEVGLSDVTLIMAGGVWHLKDWE SWFDNSLIGPIAFQFGTRPLLTQESPISAAWKKKLMSLKPGDVFLNKFSPTGFYSSAVRNEFIKELQERNARQIAFEEQI SERCSAELTIGSRGRKVYVHPDDKKLSELWISMGYTDTLKTPDNTLVFVTQSKSKSIREDQINCMGCLSHCRFSNWKDHG DYNTGIKPDVRSFCIQKTLQNIIAGVDHEYELMFSGHNAYKFVEDEFYKDGYIPTVRELVDRILTGY
Sequences:
>Translated_467_residues MRKKIKKVLISGKSVWPIIEGGKGIGVSDGRTAGAFAAASAVGTFSGACAKFLDQNGEYVPLIYRGKTRLERHDELISYS IDAAVSQAKVAHDISAGLGRIHMNILWEMGGAQKILHGVLEKAKGLIHGITCGAGMPYKLAEIASQYQVYYYPIVSSARA FKILWQRSYQKFSKILLGGVVYEDPWLAGGHNGLSNSESPDNPQMPFERVAAIRKYMNEVGLSDVTLIMAGGVWHLKDWE SWFDNSLIGPIAFQFGTRPLLTQESPISAAWKKKLMSLKPGDVFLNKFSPTGFYSSAVRNEFIKELQERNARQIAFEEQI SERCSAELTIGSRGRKVYVHPDDKKLSELWISMGYTDTLKTPDNTLVFVTQSKSKSIREDQINCMGCLSHCRFSNWKDHG DYNTGIKPDVRSFCIQKTLQNIIAGVDHEYELMFSGHNAYKFVEDEFYKDGYIPTVRELVDRILTGY >Mature_467_residues MRKKIKKVLISGKSVWPIIEGGKGIGVSDGRTAGAFAAASAVGTFSGACAKFLDQNGEYVPLIYRGKTRLERHDELISYS IDAAVSQAKVAHDISAGLGRIHMNILWEMGGAQKILHGVLEKAKGLIHGITCGAGMPYKLAEIASQYQVYYYPIVSSARA FKILWQRSYQKFSKILLGGVVYEDPWLAGGHNGLSNSESPDNPQMPFERVAAIRKYMNEVGLSDVTLIMAGGVWHLKDWE SWFDNSLIGPIAFQFGTRPLLTQESPISAAWKKKLMSLKPGDVFLNKFSPTGFYSSAVRNEFIKELQERNARQIAFEEQI SERCSAELTIGSRGRKVYVHPDDKKLSELWISMGYTDTLKTPDNTLVFVTQSKSKSIREDQINCMGCLSHCRFSNWKDHG DYNTGIKPDVRSFCIQKTLQNIIAGVDHEYELMFSGHNAYKFVEDEFYKDGYIPTVRELVDRILTGY
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52303; Mature: 52303
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKIKKVLISGKSVWPIIEGGKGIGVSDGRTAGAFAAASAVGTFSGACAKFLDQNGEYV CHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE PLIYRGKTRLERHDELISYSIDAAVSQAKVAHDISAGLGRIHMNILWEMGGAQKILHGVL EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHEEECCCHHHHHHHHH EKAKGLIHGITCGAGMPYKLAEIASQYQVYYYPIVSSARAFKILWQRSYQKFSKILLGGV HHHCHHEEEEECCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCE VYEDPWLAGGHNGLSNSESPDNPQMPFERVAAIRKYMNEVGLSDVTLIMAGGVWHLKDWE EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCHH SWFDNSLIGPIAFQFGTRPLLTQESPISAAWKKKLMSLKPGDVFLNKFSPTGFYSSAVRN HHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHH EFIKELQERNARQIAFEEQISERCSAELTIGSRGRKVYVHPDDKKLSELWISMGYTDTLK HHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCC TPDNTLVFVTQSKSKSIREDQINCMGCLSHCRFSNWKDHGDYNTGIKPDVRSFCIQKTLQ CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH NIIAGVDHEYELMFSGHNAYKFVEDEFYKDGYIPTVRELVDRILTGY HHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRKKIKKVLISGKSVWPIIEGGKGIGVSDGRTAGAFAAASAVGTFSGACAKFLDQNGEYV CHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE PLIYRGKTRLERHDELISYSIDAAVSQAKVAHDISAGLGRIHMNILWEMGGAQKILHGVL EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHEEECCCHHHHHHHHH EKAKGLIHGITCGAGMPYKLAEIASQYQVYYYPIVSSARAFKILWQRSYQKFSKILLGGV HHHCHHEEEEECCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCE VYEDPWLAGGHNGLSNSESPDNPQMPFERVAAIRKYMNEVGLSDVTLIMAGGVWHLKDWE EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCHH SWFDNSLIGPIAFQFGTRPLLTQESPISAAWKKKLMSLKPGDVFLNKFSPTGFYSSAVRN HHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHH EFIKELQERNARQIAFEEQISERCSAELTIGSRGRKVYVHPDDKKLSELWISMGYTDTLK HHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCC TPDNTLVFVTQSKSKSIREDQINCMGCLSHCRFSNWKDHGDYNTGIKPDVRSFCIQKTLQ CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH NIIAGVDHEYELMFSGHNAYKFVEDEFYKDGYIPTVRELVDRILTGY HHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA