| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617443
Identifier: 58617443
GI number: 58617443
Start: 1133789
End: 1136434
Strand: Reverse
Name: 58617443
Synonym: ERGA_CDS_07160
Alternate gene names: NA
Gene position: 1136434-1133789 (Counterclockwise)
Preceding gene: 58617449
Following gene: 58617442
Centisome position: 75.77
GC content: 31.37
Gene sequence:
>2646_bases ATGAAAAATAAGGAAGAGGATATACAACATATAATAGAACGAGAGTTAGCTTCTTCAAGGCAAATTGATGATGGTAGTAA AATTACTGCCTATACAGTAAGCTTTTTGGCTTTTTTTTGGGCATGCTTTCAATTATTTATAGCTTCGCCTTTGCCTTTTT GGTTGGTTGGTTGTGGGATAGAGTGGGCAGTCCTTCCTGATATTCAGTGTAGAGCTATACACTTAGCATTTGCATTTTCT TTGTTGTTTTTATTTTTTCCAATATCGGAAGGTTCAAACAAAAGTTTTATTAAAGCTTTTAATTGGATTTCTGCTATATT AGCTAGTATATCTGCATTATATATTGTGGTATTTTACGAGGAATTATCATTTAGGATAGCAATGCCTAATGATATTGACT TGATAATAGCATTTTTTGGATTTTTATTTTTATTAGAAGGTGCCAGAAGAGCAATAGGTTTGCCTATTACTATTATTGTT TTGGCTTTTTTAGTATATGCTTATTTTGGCAAATATATGCCTGATATTGTTGCACATAAAGGGCACAATTTTTCTTCTAT AGCGTCTCATGAGTGGTTATCCCAGGAAGGGGTATTTGGAGTGGCATTAGCTGTATCTTGTAATTTTGTATTTTTATATG TACTATTTGGTGCCTTTCTAGACAAGGCTGGTGCTGGTAATTTTTTCATTAAACTATCGTTTGCATTACTTGGAAGGTTT GTTGGTGGTCCTGCTAAAGCTGCCGTTATTGCTTCTGGTTTTATGGGTATGATGTCTGGATCTTCAATTGCTAATACTAT TACTATAGGGTCTTTTACTATCCCTTTAATGAAGAAGATGGGTTTAAGTGCTGAAAAAGCTGCCGCAATAGAAGTTTCAG CTGGTGTTAATGGACAAGTTATGCCCCCAGTAATGGGTGCAGCAGCGTTTTTAATGTCGGAATTTTTATCTATTCCATAT GCAACAATTGTAAAATATGCGTTTGTTCCAGCAGTGATGGTATATATTACTTTACTTTATATTGTACATCTAGAAGCTTG TAAGTTAGATATGCGCCCTGTAATTGATTTAACAAAAGCAAGATCTATTTATTTAAGTTTACTACGATTTTTTATTTCTG TTAGTTGTATAGTTATTTTATCATGTGCTGTTTATGTGCTTATAGAAGGAGTGGATATATACGGAATTTATATTCCTGGG ATCAAGGATATCTTTCTTGATAAAAGTATATACTGTATATCGTTAATATTGATTGGTTTATATGTTGGAGTACTCTTTTA TCAATCTAGAGGTGAACGTTTTAGGACTAATGACAATCAAGAAGATAAGTGCCCAAGTTTATCAGAAACTTTTAAGTATG GAATACATTATTTTATTCCAATTTTTATTTTAATATGGTGTCTAATAGTTGAAAAATTATCTTCAGCACTATCCTGCTTT TGGACAAATTTATTCTTAATTTTTATGTTACTTACCAGGGATACAATATATGCCTTATTTATTAAGAAAACATCAGGTAT ACTTTCTGTGTTTTTTGGTAGTGTGAAACAGATATATGAAGCTATGGTGATGGCTTCTAAAAACATGATTGCTATTGCAA TTGCTACAGGTGCAGCTGGAATTATAGTTGGTATTGTATCATTAACTGGTTTTGGTTTGTCAATTAGCGGTATGCTTGAT TCTATAGCAAGTGGTAGTTTGTTTATTACGTTATTAGTTACAGCGATAATATGTATAGTATTAGGAATGGGAATGCCAGC AACTGGATGTTACATTATAGTATCTACACTTATGGCACCTATTTTGACTTCTGTGATACATAAGAGTGGCATGTATGTTC CACAGATTGCTATACATCTATTTGTTTTCTATTTTGGTATTATGGCAGATGTCACTCCACCAGTAGGTATAGCTTCCTAT GCTGCTGCGGCTATTGCAAAAGGTAATGCTTTTAAAACTGGAGTACAGTCTTTCTTGTATAACATAAGGACTATGATAGT TCCTTTCTTATTTATATATAATACTGAGCTAATATTATACGATATTACAAATATATGGGATAATATAATAGTTATCTGTG TTTCTTTAGTTGGAATATTGAGTATTTCAGCAGCAATGCAAGGGTATTTTATTAGGCGAAATAAATTGTATGAGTCTATT ATGCTATTGGTTGTTGGGATAATGTTTATTATGCAGAATTATATTACTAATTTAATAGTATCTCCATATGATGATATCAT ATTTTCTGAATTAGATCGTACATTAATAGTCTCTAAAAATAGTTCTATTAAAATTACTGTGCAAAGAAAAGATGATACCA GTAATGTTACACGAAAGGATGTTATCATACCATTAAAAGATAAGGTAGATACAGTTGAATACCAAAGTACAATGCTTAAT TTATTGCGTAAAAATCTTGGTATAATTGTTGATAATGTTCAAACATCCAGTAATAGGTTAGGTGTTGTTGATATAGCTAG TTGGAGTTCTGTAGAACCTTCTGATATGGATAATACGTATGATATTGTAGGTTTAGCATTATCTGTTAAAAAATATTATC ATGTTATTTGTATTTATTTAATAGCTATTGTGTTACTGTTAGTAGTTATCTTCTTACAAACTAGAAGAAACAATACTATA AAATGA
Upstream 100 bases:
>100_bases AGAGAACTGTAGGTGTTAATTGATGGGGTGATATTTTATTGACGTGGAAATTACGTGATGCTATTAACTAATAAATAATT AGAACAAGGTTGATTGTAGG
Downstream 100 bases:
>100_bases AGTAGGATTGATATGCTAGATTTAGCAGTAATTGGTATTATATTATTATCGATTATAATTGGTGTTTTAAGAGGTTTTAT TAAGGAAGTATTTGGTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Inner Membrane Protein; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; TRAP-Type Transporter Fused Permeases; Trap Transporter; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component
Number of amino acids: Translated: 881; Mature: 881
Protein sequence:
>881_residues MKNKEEDIQHIIERELASSRQIDDGSKITAYTVSFLAFFWACFQLFIASPLPFWLVGCGIEWAVLPDIQCRAIHLAFAFS LLFLFFPISEGSNKSFIKAFNWISAILASISALYIVVFYEELSFRIAMPNDIDLIIAFFGFLFLLEGARRAIGLPITIIV LAFLVYAYFGKYMPDIVAHKGHNFSSIASHEWLSQEGVFGVALAVSCNFVFLYVLFGAFLDKAGAGNFFIKLSFALLGRF VGGPAKAAVIASGFMGMMSGSSIANTITIGSFTIPLMKKMGLSAEKAAAIEVSAGVNGQVMPPVMGAAAFLMSEFLSIPY ATIVKYAFVPAVMVYITLLYIVHLEACKLDMRPVIDLTKARSIYLSLLRFFISVSCIVILSCAVYVLIEGVDIYGIYIPG IKDIFLDKSIYCISLILIGLYVGVLFYQSRGERFRTNDNQEDKCPSLSETFKYGIHYFIPIFILIWCLIVEKLSSALSCF WTNLFLIFMLLTRDTIYALFIKKTSGILSVFFGSVKQIYEAMVMASKNMIAIAIATGAAGIIVGIVSLTGFGLSISGMLD SIASGSLFITLLVTAIICIVLGMGMPATGCYIIVSTLMAPILTSVIHKSGMYVPQIAIHLFVFYFGIMADVTPPVGIASY AAAAIAKGNAFKTGVQSFLYNIRTMIVPFLFIYNTELILYDITNIWDNIIVICVSLVGILSISAAMQGYFIRRNKLYESI MLLVVGIMFIMQNYITNLIVSPYDDIIFSELDRTLIVSKNSSIKITVQRKDDTSNVTRKDVIIPLKDKVDTVEYQSTMLN LLRKNLGIIVDNVQTSSNRLGVVDIASWSSVEPSDMDNTYDIVGLALSVKKYYHVICIYLIAIVLLLVVIFLQTRRNNTI K
Sequences:
>Translated_881_residues MKNKEEDIQHIIERELASSRQIDDGSKITAYTVSFLAFFWACFQLFIASPLPFWLVGCGIEWAVLPDIQCRAIHLAFAFS LLFLFFPISEGSNKSFIKAFNWISAILASISALYIVVFYEELSFRIAMPNDIDLIIAFFGFLFLLEGARRAIGLPITIIV LAFLVYAYFGKYMPDIVAHKGHNFSSIASHEWLSQEGVFGVALAVSCNFVFLYVLFGAFLDKAGAGNFFIKLSFALLGRF VGGPAKAAVIASGFMGMMSGSSIANTITIGSFTIPLMKKMGLSAEKAAAIEVSAGVNGQVMPPVMGAAAFLMSEFLSIPY ATIVKYAFVPAVMVYITLLYIVHLEACKLDMRPVIDLTKARSIYLSLLRFFISVSCIVILSCAVYVLIEGVDIYGIYIPG IKDIFLDKSIYCISLILIGLYVGVLFYQSRGERFRTNDNQEDKCPSLSETFKYGIHYFIPIFILIWCLIVEKLSSALSCF WTNLFLIFMLLTRDTIYALFIKKTSGILSVFFGSVKQIYEAMVMASKNMIAIAIATGAAGIIVGIVSLTGFGLSISGMLD SIASGSLFITLLVTAIICIVLGMGMPATGCYIIVSTLMAPILTSVIHKSGMYVPQIAIHLFVFYFGIMADVTPPVGIASY AAAAIAKGNAFKTGVQSFLYNIRTMIVPFLFIYNTELILYDITNIWDNIIVICVSLVGILSISAAMQGYFIRRNKLYESI MLLVVGIMFIMQNYITNLIVSPYDDIIFSELDRTLIVSKNSSIKITVQRKDDTSNVTRKDVIIPLKDKVDTVEYQSTMLN LLRKNLGIIVDNVQTSSNRLGVVDIASWSSVEPSDMDNTYDIVGLALSVKKYYHVICIYLIAIVLLLVVIFLQTRRNNTI K >Mature_881_residues MKNKEEDIQHIIERELASSRQIDDGSKITAYTVSFLAFFWACFQLFIASPLPFWLVGCGIEWAVLPDIQCRAIHLAFAFS LLFLFFPISEGSNKSFIKAFNWISAILASISALYIVVFYEELSFRIAMPNDIDLIIAFFGFLFLLEGARRAIGLPITIIV LAFLVYAYFGKYMPDIVAHKGHNFSSIASHEWLSQEGVFGVALAVSCNFVFLYVLFGAFLDKAGAGNFFIKLSFALLGRF VGGPAKAAVIASGFMGMMSGSSIANTITIGSFTIPLMKKMGLSAEKAAAIEVSAGVNGQVMPPVMGAAAFLMSEFLSIPY ATIVKYAFVPAVMVYITLLYIVHLEACKLDMRPVIDLTKARSIYLSLLRFFISVSCIVILSCAVYVLIEGVDIYGIYIPG IKDIFLDKSIYCISLILIGLYVGVLFYQSRGERFRTNDNQEDKCPSLSETFKYGIHYFIPIFILIWCLIVEKLSSALSCF WTNLFLIFMLLTRDTIYALFIKKTSGILSVFFGSVKQIYEAMVMASKNMIAIAIATGAAGIIVGIVSLTGFGLSISGMLD SIASGSLFITLLVTAIICIVLGMGMPATGCYIIVSTLMAPILTSVIHKSGMYVPQIAIHLFVFYFGIMADVTPPVGIASY AAAAIAKGNAFKTGVQSFLYNIRTMIVPFLFIYNTELILYDITNIWDNIIVICVSLVGILSISAAMQGYFIRRNKLYESI MLLVVGIMFIMQNYITNLIVSPYDDIIFSELDRTLIVSKNSSIKITVQRKDDTSNVTRKDVIIPLKDKVDTVEYQSTMLN LLRKNLGIIVDNVQTSSNRLGVVDIASWSSVEPSDMDNTYDIVGLALSVKKYYHVICIYLIAIVLLLVVIFLQTRRNNTI K
Specific function: Unknown
COG id: COG4666
COG function: function code R; TRAP-type uncharacterized transport system, fused permease components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97465; Mature: 97465
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKEEDIQHIIERELASSRQIDDGSKITAYTVSFLAFFWACFQLFIASPLPFWLVGCGI CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC EWAVLPDIQCRAIHLAFAFSLLFLFFPISEGSNKSFIKAFNWISAILASISALYIVVFYE CEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEH ELSFRIAMPNDIDLIIAFFGFLFLLEGARRAIGLPITIIVLAFLVYAYFGKYMPDIVAHK HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GHNFSSIASHEWLSQEGVFGVALAVSCNFVFLYVLFGAFLDKAGAGNFFIKLSFALLGRF CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH VGGPAKAAVIASGFMGMMSGSSIANTITIGSFTIPLMKKMGLSAEKAAAIEVSAGVNGQV HCCCHHHHHHHHHHHHHHCCCCHHCEEEECCHHHHHHHHCCCCCCCCEEEEEECCCCCCC MPPVMGAAAFLMSEFLSIPYATIVKYAFVPAVMVYITLLYIVHLEACKLDMRPVIDLTKA CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RSIYLSLLRFFISVSCIVILSCAVYVLIEGVDIYGIYIPGIKDIFLDKSIYCISLILIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHCCHHHHHHHHHHHH YVGVLFYQSRGERFRTNDNQEDKCPSLSETFKYGIHYFIPIFILIWCLIVEKLSSALSCF HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTNLFLIFMLLTRDTIYALFIKKTSGILSVFFGSVKQIYEAMVMASKNMIAIAIATGAAG HHHHHHHHHHHHHHHHHHEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHH IIVGIVSLTGFGLSISGMLDSIASGSLFITLLVTAIICIVLGMGMPATGCYIIVSTLMAP HHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ILTSVIHKSGMYVPQIAIHLFVFYFGIMADVTPPVGIASYAAAAIAKGNAFKTGVQSFLY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH NIRTMIVPFLFIYNTELILYDITNIWDNIIVICVSLVGILSISAAMQGYFIRRNKLYESI HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVVGIMFIMQNYITNLIVSPYDDIIFSELDRTLIVSKNSSIKITVQRKDDTSNVTRKD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCCCCC VIIPLKDKVDTVEYQSTMLNLLRKNLGIIVDNVQTSSNRLGVVDIASWSSVEPSDMDNTY EEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCH DIVGLALSVKKYYHVICIYLIAIVLLLVVIFLQTRRNNTIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKNKEEDIQHIIERELASSRQIDDGSKITAYTVSFLAFFWACFQLFIASPLPFWLVGCGI CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC EWAVLPDIQCRAIHLAFAFSLLFLFFPISEGSNKSFIKAFNWISAILASISALYIVVFYE CEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEH ELSFRIAMPNDIDLIIAFFGFLFLLEGARRAIGLPITIIVLAFLVYAYFGKYMPDIVAHK HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GHNFSSIASHEWLSQEGVFGVALAVSCNFVFLYVLFGAFLDKAGAGNFFIKLSFALLGRF CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH VGGPAKAAVIASGFMGMMSGSSIANTITIGSFTIPLMKKMGLSAEKAAAIEVSAGVNGQV HCCCHHHHHHHHHHHHHHCCCCHHCEEEECCHHHHHHHHCCCCCCCCEEEEEECCCCCCC MPPVMGAAAFLMSEFLSIPYATIVKYAFVPAVMVYITLLYIVHLEACKLDMRPVIDLTKA CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RSIYLSLLRFFISVSCIVILSCAVYVLIEGVDIYGIYIPGIKDIFLDKSIYCISLILIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHCCHHHHHHHHHHHH YVGVLFYQSRGERFRTNDNQEDKCPSLSETFKYGIHYFIPIFILIWCLIVEKLSSALSCF HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTNLFLIFMLLTRDTIYALFIKKTSGILSVFFGSVKQIYEAMVMASKNMIAIAIATGAAG HHHHHHHHHHHHHHHHHHEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHH IIVGIVSLTGFGLSISGMLDSIASGSLFITLLVTAIICIVLGMGMPATGCYIIVSTLMAP HHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ILTSVIHKSGMYVPQIAIHLFVFYFGIMADVTPPVGIASYAAAAIAKGNAFKTGVQSFLY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH NIRTMIVPFLFIYNTELILYDITNIWDNIIVICVSLVGILSISAAMQGYFIRRNKLYESI HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVVGIMFIMQNYITNLIVSPYDDIIFSELDRTLIVSKNSSIKITVQRKDDTSNVTRKD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCCCCC VIIPLKDKVDTVEYQSTMLNLLRKNLGIIVDNVQTSSNRLGVVDIASWSSVEPSDMDNTY EEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCH DIVGLALSVKKYYHVICIYLIAIVLLLVVIFLQTRRNNTIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA