| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is pccA [H]
Identifier: 58617274
GI number: 58617274
Start: 889040
End: 891022
Strand: Reverse
Name: pccA [H]
Synonym: ERGA_CDS_05470
Alternate gene names: 58617274
Gene position: 891022-889040 (Counterclockwise)
Preceding gene: 58617278
Following gene: 58617273
Centisome position: 59.4
GC content: 31.11
Gene sequence:
>1983_bases GTGTTGATAATCATGATAAAGAAGATATTAATAGCAAATAGAGGTGAAATTGCGTGTAGAATAATGAAAACTGCTCATAA AATGGGGATATATTGTGTAGCTATATATTCAGATGCAGATGTGTATTCTTTACATGCTTTATCTGCTGATGAAGCAGTGA ATATTGGTCCTGCTCCTGTAGGTCAAAGTTATTTAAGTATAGAGAAAATTTGTGAAATAGCTAGAGATCTAGGTGTACAA GCAGTACATCCTGGATATGGTTTTTTATCTGAGAATGCTAATTTTCCTGAAAAGCTTAATGATTATGGAATTGAATTTAT TGGTCCTAGTGCTGATTCTATTAGGATGATGGCTGATAAGATTACTTCAAAAAAAATAGCTGAATCTGCACAAGTTAACA TTATTCCTGGTTATATGGGAATTGTAGATTCTTCTGAACAAGCAGAAAAAATAGCAGAATCTATAGGATTTCCAGTTATG ATTAAGGCTACTGCTGGTGGTGGCGGTAAAGGCATGAGAATTGTAAAATCAAGAGATGAAATAAATCAAGCATTTACTTC TGCAACAAATGAAGCATCAAAAAATTTTAGAGATGGTAGAATTTTTATTGAAAAATATATTGAATTACCAAGACATATTG AAATACAAATTCTAGCTGATAAACATGGAAATATTGTATGTTTAGGGGAAAGAGAGTGTTCAATACAAAGACATAATCAA AAGGTTATAGAAGAAACACCCAGTCCTTTTCTTGATGAGCGTACAAGACGAAAGATGTACAAACAATGTATTAGTTTAGC TAGGAAAGTTGGCTACTATTCTGCTGGTACTATAGAGTTTGTTGTTGACCAAAATAAGCAATTTTATTTTCTAGAGATGA ATACTAGATTACAAGTTGAGCACCCTGTTACAGAGCTTGTGACTGGCATTGATATAGTAGAAGAAATGATACGAATTGCT AATGGTGAAAAGTTAAGGTTTACTCAAAAGGATATCGAATTCAATGGTTCAGCGATAGAAGCTAGAATTTATGCAGAAGA TCCTATGAAGAATTTTTTGCCATCTAGTGGTAGAGTAGTTTATTATTCTGCTCCTGTACCTAATGATAATTTAAGAATTG ATAGTGGAATATTCGAAGGATCAGAAGTGAGTATGTTTTATGATCCTATGGTTGCTAAAGTGTGTACATATGGTCAAGAT AGGAATGAAGCGATAAGTTTTATGCAAAAGTATTTAAATAGTTTTTATATTAATGGTATTGCTAATAACATAGATTTTTT ATTATCTGTATTTAATAATTCTGTATTTATCTCTGGAAATATTAATACGAAATTTGTTGAACAATTTTATCCTAATGGTT TTCAAGGTGAACACTTAACAGAATACAGCATAGAGCTTTTTATTTTGACTGCAATATTTATATTTTTTCAAGATGAATAT GGGGAATATGCGTATGTTTTGTTTTATGATAAGGAATTAGTTGTTTATGTAAATGATCAGGAATATTTTGTATCAGTAAA ATATGAAGATGGTAAAATAGTTGTTCTATATAATGATGTCAGGTATGTGATATCAGGTATGTGGAATGTGAATTTTAAAA TATTAGAGCTAGGAGTAAATGGTAAAGTTATTCCAATAAAGGTTGATAGTAGAAAAATTGGTAAATATCAATTAAGGTAT TCTGCAATACGTGCAACATGTGCAGTATATAGGCCTTATGTATCTAAATTACTTAGTATAATGCCTAAAACCGATTTACA AGAACTTGTTCCTAATAATGTATGCTCTCCTATTTCTGGTATGATAGTGAAGATCTATGTTAAGGAAGGGGAAGAGATCT ATCCTGGACAGTCATTATTGGTGATAGAAGCTATGAAAATGGAAAATGTAATATGTTCAGATGTTAAGTCAATAGTAAAG TCTGTGTTGTTAGCAGAGGGAAGCAATGTTTCTACTGGAGATGTTATTATTGAGTTAACTTAG
Upstream 100 bases:
>100_bases TGTCGTCAAAATAGTCAGATATTGCTTGCAGTATAGCTATAGCTAGGTAAAATTTAGTCTATTTTTGATATTGTTTAGTA AAGGTGACCTATAATTTAGA
Downstream 100 bases:
>100_bases CTATAGCTTTGTATATATATTAATTACTTGTTATTGTATGTAGCAACTAGAATATAAATTGTAAAAAAAGATTTTTCATT ATAGTGTCAGTTGTAGTACA
Product: propionyl-CoA carboxylase alpha chain
Products: NA
Alternate protein names: Pyruvic carboxylase A [H]
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MLIIMIKKILIANRGEIACRIMKTAHKMGIYCVAIYSDADVYSLHALSADEAVNIGPAPVGQSYLSIEKICEIARDLGVQ AVHPGYGFLSENANFPEKLNDYGIEFIGPSADSIRMMADKITSKKIAESAQVNIIPGYMGIVDSSEQAEKIAESIGFPVM IKATAGGGGKGMRIVKSRDEINQAFTSATNEASKNFRDGRIFIEKYIELPRHIEIQILADKHGNIVCLGERECSIQRHNQ KVIEETPSPFLDERTRRKMYKQCISLARKVGYYSAGTIEFVVDQNKQFYFLEMNTRLQVEHPVTELVTGIDIVEEMIRIA NGEKLRFTQKDIEFNGSAIEARIYAEDPMKNFLPSSGRVVYYSAPVPNDNLRIDSGIFEGSEVSMFYDPMVAKVCTYGQD RNEAISFMQKYLNSFYINGIANNIDFLLSVFNNSVFISGNINTKFVEQFYPNGFQGEHLTEYSIELFILTAIFIFFQDEY GEYAYVLFYDKELVVYVNDQEYFVSVKYEDGKIVVLYNDVRYVISGMWNVNFKILELGVNGKVIPIKVDSRKIGKYQLRY SAIRATCAVYRPYVSKLLSIMPKTDLQELVPNNVCSPISGMIVKIYVKEGEEIYPGQSLLVIEAMKMENVICSDVKSIVK SVLLAEGSNVSTGDVIIELT
Sequences:
>Translated_660_residues MLIIMIKKILIANRGEIACRIMKTAHKMGIYCVAIYSDADVYSLHALSADEAVNIGPAPVGQSYLSIEKICEIARDLGVQ AVHPGYGFLSENANFPEKLNDYGIEFIGPSADSIRMMADKITSKKIAESAQVNIIPGYMGIVDSSEQAEKIAESIGFPVM IKATAGGGGKGMRIVKSRDEINQAFTSATNEASKNFRDGRIFIEKYIELPRHIEIQILADKHGNIVCLGERECSIQRHNQ KVIEETPSPFLDERTRRKMYKQCISLARKVGYYSAGTIEFVVDQNKQFYFLEMNTRLQVEHPVTELVTGIDIVEEMIRIA NGEKLRFTQKDIEFNGSAIEARIYAEDPMKNFLPSSGRVVYYSAPVPNDNLRIDSGIFEGSEVSMFYDPMVAKVCTYGQD RNEAISFMQKYLNSFYINGIANNIDFLLSVFNNSVFISGNINTKFVEQFYPNGFQGEHLTEYSIELFILTAIFIFFQDEY GEYAYVLFYDKELVVYVNDQEYFVSVKYEDGKIVVLYNDVRYVISGMWNVNFKILELGVNGKVIPIKVDSRKIGKYQLRY SAIRATCAVYRPYVSKLLSIMPKTDLQELVPNNVCSPISGMIVKIYVKEGEEIYPGQSLLVIEAMKMENVICSDVKSIVK SVLLAEGSNVSTGDVIIELT >Mature_660_residues MLIIMIKKILIANRGEIACRIMKTAHKMGIYCVAIYSDADVYSLHALSADEAVNIGPAPVGQSYLSIEKICEIARDLGVQ AVHPGYGFLSENANFPEKLNDYGIEFIGPSADSIRMMADKITSKKIAESAQVNIIPGYMGIVDSSEQAEKIAESIGFPVM IKATAGGGGKGMRIVKSRDEINQAFTSATNEASKNFRDGRIFIEKYIELPRHIEIQILADKHGNIVCLGERECSIQRHNQ KVIEETPSPFLDERTRRKMYKQCISLARKVGYYSAGTIEFVVDQNKQFYFLEMNTRLQVEHPVTELVTGIDIVEEMIRIA NGEKLRFTQKDIEFNGSAIEARIYAEDPMKNFLPSSGRVVYYSAPVPNDNLRIDSGIFEGSEVSMFYDPMVAKVCTYGQD RNEAISFMQKYLNSFYINGIANNIDFLLSVFNNSVFISGNINTKFVEQFYPNGFQGEHLTEYSIELFILTAIFIFFQDEY GEYAYVLFYDKELVVYVNDQEYFVSVKYEDGKIVVLYNDVRYVISGMWNVNFKILELGVNGKVIPIKVDSRKIGKYQLRY SAIRATCAVYRPYVSKLLSIMPKTDLQELVPNNVCSPISGMIVKIYVKEGEEIYPGQSLLVIEAMKMENVICSDVKSIVK SVLLAEGSNVSTGDVIIELT
Specific function: Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI189095269, Length=667, Percent_Identity=46.1769115442279, Blast_Score=573, Evalue=1e-163, Organism=Homo sapiens, GI65506442, Length=667, Percent_Identity=46.1769115442279, Blast_Score=572, Evalue=1e-163, Organism=Homo sapiens, GI295821183, Length=655, Percent_Identity=45.9541984732824, Blast_Score=544, Evalue=1e-154, Organism=Homo sapiens, GI116805327, Length=674, Percent_Identity=40.0593471810089, Blast_Score=493, Evalue=1e-139, Organism=Homo sapiens, GI106049528, Length=457, Percent_Identity=43.7636761487965, Blast_Score=383, Evalue=1e-106, Organism=Homo sapiens, GI106049295, Length=457, Percent_Identity=43.7636761487965, Blast_Score=383, Evalue=1e-106, Organism=Homo sapiens, GI106049292, Length=457, Percent_Identity=43.7636761487965, Blast_Score=383, Evalue=1e-106, Organism=Homo sapiens, GI38679974, Length=690, Percent_Identity=28.5507246376812, Blast_Score=248, Evalue=2e-65, Organism=Homo sapiens, GI38679977, Length=690, Percent_Identity=28.5507246376812, Blast_Score=248, Evalue=2e-65, Organism=Homo sapiens, GI38679967, Length=690, Percent_Identity=28.5507246376812, Blast_Score=248, Evalue=2e-65, Organism=Homo sapiens, GI38679960, Length=690, Percent_Identity=28.5507246376812, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI38679971, Length=690, Percent_Identity=28.5507246376812, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI134142062, Length=697, Percent_Identity=28.5509325681492, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI18105007, Length=249, Percent_Identity=22.4899598393574, Blast_Score=76, Evalue=9e-14, Organism=Escherichia coli, GI1789654, Length=445, Percent_Identity=44.9438202247191, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI1786216, Length=243, Percent_Identity=24.6913580246914, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567343, Length=677, Percent_Identity=43.7223042836041, Blast_Score=538, Evalue=1e-153, Organism=Caenorhabditis elegans, GI71987519, Length=673, Percent_Identity=39.6731054977712, Blast_Score=463, Evalue=1e-130, Organism=Caenorhabditis elegans, GI17562816, Length=467, Percent_Identity=42.3982869379015, Blast_Score=369, Evalue=1e-102, Organism=Caenorhabditis elegans, GI71997163, Length=507, Percent_Identity=31.7554240631164, Blast_Score=232, Evalue=5e-61, Organism=Caenorhabditis elegans, GI71997168, Length=507, Percent_Identity=31.7554240631164, Blast_Score=232, Evalue=5e-61, Organism=Caenorhabditis elegans, GI133931226, Length=702, Percent_Identity=28.7749287749288, Blast_Score=228, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6319685, Length=446, Percent_Identity=44.6188340807175, Blast_Score=407, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6319695, Length=457, Percent_Identity=43.3260393873085, Blast_Score=347, Evalue=3e-96, Organism=Saccharomyces cerevisiae, GI6321376, Length=457, Percent_Identity=43.9824945295405, Blast_Score=337, Evalue=4e-93, Organism=Saccharomyces cerevisiae, GI6323863, Length=683, Percent_Identity=29.1361639824305, Blast_Score=246, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324343, Length=733, Percent_Identity=27.2851296043656, Blast_Score=243, Evalue=8e-65, Organism=Drosophila melanogaster, GI24651757, Length=684, Percent_Identity=38.7426900584795, Blast_Score=486, Evalue=1e-137, Organism=Drosophila melanogaster, GI24651759, Length=646, Percent_Identity=37.4613003095975, Blast_Score=435, Evalue=1e-122, Organism=Drosophila melanogaster, GI281363050, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI24652224, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI24652222, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI24652220, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI24652218, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI24652212, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI24652210, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI24652214, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI19921944, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI24652216, Length=475, Percent_Identity=41.4736842105263, Blast_Score=358, Evalue=5e-99, Organism=Drosophila melanogaster, GI161076409, Length=708, Percent_Identity=27.8248587570621, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI161076407, Length=708, Percent_Identity=27.8248587570621, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24586460, Length=708, Percent_Identity=27.8248587570621, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24586458, Length=708, Percent_Identity=27.8248587570621, Blast_Score=226, Evalue=4e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.4.1.1 [H]
Molecular weight: Translated: 74346; Mature: 74346
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIIMIKKILIANRGEIACRIMKTAHKMGIYCVAIYSDADVYSLHALSADEAVNIGPAPV CEEEEEEHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCC GQSYLSIEKICEIARDLGVQAVHPGYGFLSENANFPEKLNDYGIEFIGPSADSIRMMADK CCHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCHHHHHCCCEEECCCCHHHHHHHHH ITSKKIAESAQVNIIPGYMGIVDSSEQAEKIAESIGFPVMIKATAGGGGKGMRIVKSRDE HHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECHHH INQAFTSATNEASKNFRDGRIFIEKYIELPRHIEIQILADKHGNIVCLGERECSIQRHNQ HHHHHHHHCHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCHHHHCH KVIEETPSPFLDERTRRKMYKQCISLARKVGYYSAGTIEFVVDQNKQFYFLEMNTRLQVE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCEEEEC HPVTELVTGIDIVEEMIRIANGEKLRFTQKDIEFNGSAIEARIYAEDPMKNFLPSSGRVV CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCEEEEEEEECCCHHHHCCCCCEEE YYSAPVPNDNLRIDSGIFEGSEVSMFYDPMVAKVCTYGQDRNEAISFMQKYLNSFYINGI EEECCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCH ANNIDFLLSVFNNSVFISGNINTKFVEQFYPNGFQGEHLTEYSIELFILTAIFIFFQDEY HHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHEECCC GEYAYVLFYDKELVVYVNDQEYFVSVKYEDGKIVVLYNDVRYVISGMWNVNFKILELGVN CCEEEEEEECCEEEEEECCCEEEEEEEECCCEEEEEECCHHHHHHCCCCCCEEEEEECCC GKVIPIKVDSRKIGKYQLRYSAIRATCAVYRPYVSKLLSIMPKTDLQELVPNNVCSPISG CEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC MIVKIYVKEGEEIYPGQSLLVIEAMKMENVICSDVKSIVKSVLLAEGSNVSTGDVIIELT EEEEEEEECCCEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC >Mature Secondary Structure MLIIMIKKILIANRGEIACRIMKTAHKMGIYCVAIYSDADVYSLHALSADEAVNIGPAPV CEEEEEEHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCC GQSYLSIEKICEIARDLGVQAVHPGYGFLSENANFPEKLNDYGIEFIGPSADSIRMMADK CCHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCHHHHHCCCEEECCCCHHHHHHHHH ITSKKIAESAQVNIIPGYMGIVDSSEQAEKIAESIGFPVMIKATAGGGGKGMRIVKSRDE HHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECHHH INQAFTSATNEASKNFRDGRIFIEKYIELPRHIEIQILADKHGNIVCLGERECSIQRHNQ HHHHHHHHCHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCHHHHCH KVIEETPSPFLDERTRRKMYKQCISLARKVGYYSAGTIEFVVDQNKQFYFLEMNTRLQVE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCEEEEC HPVTELVTGIDIVEEMIRIANGEKLRFTQKDIEFNGSAIEARIYAEDPMKNFLPSSGRVV CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCEEEEEEEECCCHHHHCCCCCEEE YYSAPVPNDNLRIDSGIFEGSEVSMFYDPMVAKVCTYGQDRNEAISFMQKYLNSFYINGI EEECCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCH ANNIDFLLSVFNNSVFISGNINTKFVEQFYPNGFQGEHLTEYSIELFILTAIFIFFQDEY HHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHEECCC GEYAYVLFYDKELVVYVNDQEYFVSVKYEDGKIVVLYNDVRYVISGMWNVNFKILELGVN CCEEEEEEECCEEEEEECCCEEEEEEEECCCEEEEEECCHHHHHHCCCCCCEEEEEECCC GKVIPIKVDSRKIGKYQLRYSAIRATCAVYRPYVSKLLSIMPKTDLQELVPNNVCSPISG CEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC MIVKIYVKEGEEIYPGQSLLVIEAMKMENVICSDVKSIVKSVLLAEGSNVSTGDVIIELT EEEEEEEECCCEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 11195096 [H]