| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617265
Identifier: 58617265
GI number: 58617265
Start: 868129
End: 870861
Strand: Reverse
Name: 58617265
Synonym: ERGA_CDS_05380
Alternate gene names: NA
Gene position: 870861-868129 (Counterclockwise)
Preceding gene: 58617266
Following gene: 58617264
Centisome position: 58.06
GC content: 29.02
Gene sequence:
>2733_bases ATGATGAGAAAAATTTTGGTAATCAGTATTTTACTTTTATCAAGCTGTGGATACCATAAGTGTATCAAGCCGCAAGATAT GTTATACGATGAATATTCAAATGTTGTAGCAGCTGGAATAAAAGATGGAGAAAAAGAACATATTACTTGGGTTAAATCAG ATTTAATATTAGCTGGAAGAGAATCTTTAGATATTAGTGTAAGCACAGTAAATGTTAATTTTTGTAGTAATGACAAAAGA ACAATAAATGTTTTTATTAATGGTAATGAAAAAAGTGGAGATAAAAAAAAGTTTTACTTGGGGTTTAATAATATAATGCC AAAAGATAAACTTAGCTTTAGAGTAGTGCCTGAGTTTGAGTTTACTGTTGATAAAGATATATGTGATAATAAAGATCCTA GAGTTTATGTTCAAAATAAGGATAAGTGTATGGATACTTATTTTGGAGAACGTCATTATATACCTTTTGGTAAACATAAT GGTCAAATGAATAATATGATGTATTTGGAATATACCGATGGTGCATTAAAAAAGAAAGAAGAAAGAAAAGAAGAGGAAGA AAATTGGATTAATTTTCCATCTAGGATTTTATATGATATTAATTATAAGGTATATGATGAATTAGTTAGTAAAATAGATA ATAAAATAACTGATGTAAGCAGTAGAGAGATAAATTCTGAAGAGATGGCCTTACTTTGTAAGAAAGATGATAACATAAAA AATACTGGTGATGACAGTAATGAAAGAAATATCGTAATAGAGAAATATAAGAGATTATATGATGCATATACTATAAATAT GTTGTGTGGAAATTTATGTGGTTTTCGTAATTACAAAGATGAAGAGAATGAAAAGAATTGTTTTGTTGTTGAGAAAGCGA ATTATATACCAAAACAGGAAGAGATAAGTGCTTGTGTTGGTAGTACAGTATGTAATATAAAAGATGATATACAGTATACA GGGCTGCGTTTTGTATATCTATTATATGATAGTGAGGACATAAATAACTTTCTTGAGTCTGATAAAGTAATAAAAAAATG GAAAGATGATGAAAATAAACCTAATGTTAATAATGATAGTACTCTTAATAATGCTGTAGGGTTATTAACTGGTTATAATT ATAAATTTTCAAAAGAAATTAAAAATGGTGGACAAGATAAGGGGCTTTACTTAGAAATTCGACCACCAAAAGATGCTATG TTAAAAGGCAAATATACTATTGAAGCTATGAGAGATTGTAGTGGTTATGCTGAGGATAGTTTATATTATACAATATCTAA GGGTGTTCCTAATAGTAAACCAGGAGATTCAAGTACACATAAAATTGACTTTGCTAGTGATAAGAATATAACGGTAACTT TAACAAAAGAAAATACAGCAGGTGAATTGTATTTTGGTGTCAAAGATAATGGAGATGGATATAAAAATAACACTGGTTAT TTTAATATAACAGTTGTGGCAAAGAAAAGGATACCTAAGATCATATCTTATATGGTAAATACTTTAAAAGATAGTTTATA CAGGGGGTTGTATGGTACATCAGCTACTAATTCTGGATCTGTTCATTTAATATATGATAGCTTAATTAAAAATACACATT TTATTCAGATAGTAAAAGCATTATTAGTTTTGTATATATTAATAAATGCATTGTTTTATTTTGTTGGATTTGCTAAATCT TCTATTTTTGAGCTACTAGTTATAACATTAAAAATAGGTATAGTAATGTATGTTATTGGTCCTAATAGTTGGGACTTTTT TCATAATCACTTATTTAAACTATTTACTGATGCTCCTATAGAACTAATTAATATCCTGACAGGTCAGGAATCTAAGAATA GTACAAGTTTTGCATTTTTAGATATGATGTTGTACAGATTCTCTTTATCTAGCAGCTGGCTGCAAATGTTGTCGTTATTT TTTACAGGACCAATAGGATGGGTGAGTGTAACTCTGATATTTTGGGGATTATGTGTTTTGTTTTTAACTATTGCTGGTGC AATTATCACCTACTTAATATCTATTGTTCTTATAGGATTATTGCTTAGTATAGCGCCATTTTTTATAATTTGTATTTTAT TTAAACGTACCAAAGCAATTTTTGATGCATGGATAAAATCTTTAGTTCAAACTGTCATGCAACCTGTTATAATATTTGCA TCTTTTGCACTGCTGACAGAAACAATAGATAGTATAATACAGGCTATGTTTAATTTTGAATCATGTGATGCTTGTGTTAT TAATCCTACAATTAATATAGGGATAATCAAGATAACTTTCTGTTTACTTGAATTTCTTCTTCCTTCTGGATTTTCTCCTC TTTCAACATTTTCTGATAATATGAGAGATTCAGTAAATGGTGACTCACTAATATTTATAGGATTACCAGCTCCTATTACT AAGATAATAGCATTTGTTATTATGGTAAATGCAACTAAACATTTTGTTGGTTCTTCTGGTGAAATGTGTACATCAATTTT TGGATCATTTGCTAATTTATCTTCAGTTGCTGATAATGCAAAAGAAAGCCTTTTAGGGATAGTTGGTATGGACAGAAATA CTCGTATGCAAAGACAGAGATATAATGAGATGAATAGTCTAAATAATCAAAATAGTGATGGTGAACGTAAACGTAGTTCT TTTGCTGCTCCATTACCTGCAGAGGATGGTAATCGGTCATCACGTAGTGGTGTCTCAATTCCTGAAAGTCCTCCATCTAG TTTTGGTAAATAA
Upstream 100 bases:
>100_bases TTATAATGAAAATGTGTGTTTATTTAGTTTTTTAAAAGTTTGTAATATAGTGGGATATATTAATTGCTATGTTGTTTATT AAAGTAAAAGAGCTGGTTTT
Downstream 100 bases:
>100_bases TATGAAGAATAGTATTATATTATTGATGCTGTGTTTTATAACTGGATGTGGGATCAATTGTATAGAAGGTAGTAAAGGTG TAAGTAGTACTTCAGTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 910; Mature: 910
Protein sequence:
>910_residues MMRKILVISILLLSSCGYHKCIKPQDMLYDEYSNVVAAGIKDGEKEHITWVKSDLILAGRESLDISVSTVNVNFCSNDKR TINVFINGNEKSGDKKKFYLGFNNIMPKDKLSFRVVPEFEFTVDKDICDNKDPRVYVQNKDKCMDTYFGERHYIPFGKHN GQMNNMMYLEYTDGALKKKEERKEEEENWINFPSRILYDINYKVYDELVSKIDNKITDVSSREINSEEMALLCKKDDNIK NTGDDSNERNIVIEKYKRLYDAYTINMLCGNLCGFRNYKDEENEKNCFVVEKANYIPKQEEISACVGSTVCNIKDDIQYT GLRFVYLLYDSEDINNFLESDKVIKKWKDDENKPNVNNDSTLNNAVGLLTGYNYKFSKEIKNGGQDKGLYLEIRPPKDAM LKGKYTIEAMRDCSGYAEDSLYYTISKGVPNSKPGDSSTHKIDFASDKNITVTLTKENTAGELYFGVKDNGDGYKNNTGY FNITVVAKKRIPKIISYMVNTLKDSLYRGLYGTSATNSGSVHLIYDSLIKNTHFIQIVKALLVLYILINALFYFVGFAKS SIFELLVITLKIGIVMYVIGPNSWDFFHNHLFKLFTDAPIELINILTGQESKNSTSFAFLDMMLYRFSLSSSWLQMLSLF FTGPIGWVSVTLIFWGLCVLFLTIAGAIITYLISIVLIGLLLSIAPFFIICILFKRTKAIFDAWIKSLVQTVMQPVIIFA SFALLTETIDSIIQAMFNFESCDACVINPTINIGIIKITFCLLEFLLPSGFSPLSTFSDNMRDSVNGDSLIFIGLPAPIT KIIAFVIMVNATKHFVGSSGEMCTSIFGSFANLSSVADNAKESLLGIVGMDRNTRMQRQRYNEMNSLNNQNSDGERKRSS FAAPLPAEDGNRSSRSGVSIPESPPSSFGK
Sequences:
>Translated_910_residues MMRKILVISILLLSSCGYHKCIKPQDMLYDEYSNVVAAGIKDGEKEHITWVKSDLILAGRESLDISVSTVNVNFCSNDKR TINVFINGNEKSGDKKKFYLGFNNIMPKDKLSFRVVPEFEFTVDKDICDNKDPRVYVQNKDKCMDTYFGERHYIPFGKHN GQMNNMMYLEYTDGALKKKEERKEEEENWINFPSRILYDINYKVYDELVSKIDNKITDVSSREINSEEMALLCKKDDNIK NTGDDSNERNIVIEKYKRLYDAYTINMLCGNLCGFRNYKDEENEKNCFVVEKANYIPKQEEISACVGSTVCNIKDDIQYT GLRFVYLLYDSEDINNFLESDKVIKKWKDDENKPNVNNDSTLNNAVGLLTGYNYKFSKEIKNGGQDKGLYLEIRPPKDAM LKGKYTIEAMRDCSGYAEDSLYYTISKGVPNSKPGDSSTHKIDFASDKNITVTLTKENTAGELYFGVKDNGDGYKNNTGY FNITVVAKKRIPKIISYMVNTLKDSLYRGLYGTSATNSGSVHLIYDSLIKNTHFIQIVKALLVLYILINALFYFVGFAKS SIFELLVITLKIGIVMYVIGPNSWDFFHNHLFKLFTDAPIELINILTGQESKNSTSFAFLDMMLYRFSLSSSWLQMLSLF FTGPIGWVSVTLIFWGLCVLFLTIAGAIITYLISIVLIGLLLSIAPFFIICILFKRTKAIFDAWIKSLVQTVMQPVIIFA SFALLTETIDSIIQAMFNFESCDACVINPTINIGIIKITFCLLEFLLPSGFSPLSTFSDNMRDSVNGDSLIFIGLPAPIT KIIAFVIMVNATKHFVGSSGEMCTSIFGSFANLSSVADNAKESLLGIVGMDRNTRMQRQRYNEMNSLNNQNSDGERKRSS FAAPLPAEDGNRSSRSGVSIPESPPSSFGK >Mature_910_residues MMRKILVISILLLSSCGYHKCIKPQDMLYDEYSNVVAAGIKDGEKEHITWVKSDLILAGRESLDISVSTVNVNFCSNDKR TINVFINGNEKSGDKKKFYLGFNNIMPKDKLSFRVVPEFEFTVDKDICDNKDPRVYVQNKDKCMDTYFGERHYIPFGKHN GQMNNMMYLEYTDGALKKKEERKEEEENWINFPSRILYDINYKVYDELVSKIDNKITDVSSREINSEEMALLCKKDDNIK NTGDDSNERNIVIEKYKRLYDAYTINMLCGNLCGFRNYKDEENEKNCFVVEKANYIPKQEEISACVGSTVCNIKDDIQYT GLRFVYLLYDSEDINNFLESDKVIKKWKDDENKPNVNNDSTLNNAVGLLTGYNYKFSKEIKNGGQDKGLYLEIRPPKDAM LKGKYTIEAMRDCSGYAEDSLYYTISKGVPNSKPGDSSTHKIDFASDKNITVTLTKENTAGELYFGVKDNGDGYKNNTGY FNITVVAKKRIPKIISYMVNTLKDSLYRGLYGTSATNSGSVHLIYDSLIKNTHFIQIVKALLVLYILINALFYFVGFAKS SIFELLVITLKIGIVMYVIGPNSWDFFHNHLFKLFTDAPIELINILTGQESKNSTSFAFLDMMLYRFSLSSSWLQMLSLF FTGPIGWVSVTLIFWGLCVLFLTIAGAIITYLISIVLIGLLLSIAPFFIICILFKRTKAIFDAWIKSLVQTVMQPVIIFA SFALLTETIDSIIQAMFNFESCDACVINPTINIGIIKITFCLLEFLLPSGFSPLSTFSDNMRDSVNGDSLIFIGLPAPIT KIIAFVIMVNATKHFVGSSGEMCTSIFGSFANLSSVADNAKESLLGIVGMDRNTRMQRQRYNEMNSLNNQNSDGERKRSS FAAPLPAEDGNRSSRSGVSIPESPPSSFGK
Specific function: Unknown
COG id: COG3704
COG function: function code U; Type IV secretory pathway, VirB6 components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential). Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trbL/virB6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007688 [H]
Pfam domain/function: PF04610 TrbL [H]
EC number: NA
Molecular weight: Translated: 102863; Mature: 102863
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKILVISILLLSSCGYHKCIKPQDMLYDEYSNVVAAGIKDGEKEHITWVKSDLILAGR CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHEEEECCEEEECC ESLDISVSTVNVNFCSNDKRTINVFINGNEKSGDKKKFYLGFNNIMPKDKLSFRVVPEFE CCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCEE FTVDKDICDNKDPRVYVQNKDKCMDTYFGERHYIPFGKHNGQMNNMMYLEYTDGALKKKE EEECCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHH ERKEEEENWINFPSRILYDINYKVYDELVSKIDNKITDVSSREINSEEMALLCKKDDNIK HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCC NTGDDSNERNIVIEKYKRLYDAYTINMLCGNLCGFRNYKDEENEKNCFVVEKANYIPKQE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHH EISACVGSTVCNIKDDIQYTGLRFVYLLYDSEDINNFLESDKVIKKWKDDENKPNVNNDS HHHHHHCCHHCCCCCCCEECCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TLNNAVGLLTGYNYKFSKEIKNGGQDKGLYLEIRPPKDAMLKGKYTIEAMRDCSGYAEDS CHHHHHHHHCCCCCEEHHHHHCCCCCCCEEEEEECCHHHHCCCCHHHHHHHHCCCCCCCC LYYTISKGVPNSKPGDSSTHKIDFASDKNITVTLTKENTAGELYFGVKDNGDGYKNNTGY EEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCE FNITVVAKKRIPKIISYMVNTLKDSLYRGLYGTSATNSGSVHLIYDSLIKNTHFIQIVKA EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHH LLVLYILINALFYFVGFAKSSIFELLVITLKIGIVMYVIGPNSWDFFHNHLFKLFTDAPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCHH ELINILTGQESKNSTSFAFLDMMLYRFSLSSSWLQMLSLFFTGPIGWVSVTLIFWGLCVL HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FLTIAGAIITYLISIVLIGLLLSIAPFFIICILFKRTKAIFDAWIKSLVQTVMQPVIIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFALLTETIDSIIQAMFNFESCDACVINPTINIGIIKITFCLLEFLLPSGFSPLSTFSDN HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH MRDSVNGDSLIFIGLPAPITKIIAFVIMVNATKHFVGSSGEMCTSIFGSFANLSSVADNA HHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KESLLGIVGMDRNTRMQRQRYNEMNSLNNQNSDGERKRSSFAAPLPAEDGNRSSRSGVSI HHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC PESPPSSFGK CCCCCCCCCC >Mature Secondary Structure MMRKILVISILLLSSCGYHKCIKPQDMLYDEYSNVVAAGIKDGEKEHITWVKSDLILAGR CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHEEEECCEEEECC ESLDISVSTVNVNFCSNDKRTINVFINGNEKSGDKKKFYLGFNNIMPKDKLSFRVVPEFE CCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCEE FTVDKDICDNKDPRVYVQNKDKCMDTYFGERHYIPFGKHNGQMNNMMYLEYTDGALKKKE EEECCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHH ERKEEEENWINFPSRILYDINYKVYDELVSKIDNKITDVSSREINSEEMALLCKKDDNIK HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCC NTGDDSNERNIVIEKYKRLYDAYTINMLCGNLCGFRNYKDEENEKNCFVVEKANYIPKQE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHH EISACVGSTVCNIKDDIQYTGLRFVYLLYDSEDINNFLESDKVIKKWKDDENKPNVNNDS HHHHHHCCHHCCCCCCCEECCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TLNNAVGLLTGYNYKFSKEIKNGGQDKGLYLEIRPPKDAMLKGKYTIEAMRDCSGYAEDS CHHHHHHHHCCCCCEEHHHHHCCCCCCCEEEEEECCHHHHCCCCHHHHHHHHCCCCCCCC LYYTISKGVPNSKPGDSSTHKIDFASDKNITVTLTKENTAGELYFGVKDNGDGYKNNTGY EEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCE FNITVVAKKRIPKIISYMVNTLKDSLYRGLYGTSATNSGSVHLIYDSLIKNTHFIQIVKA EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHH LLVLYILINALFYFVGFAKSSIFELLVITLKIGIVMYVIGPNSWDFFHNHLFKLFTDAPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCHH ELINILTGQESKNSTSFAFLDMMLYRFSLSSSWLQMLSLFFTGPIGWVSVTLIFWGLCVL HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FLTIAGAIITYLISIVLIGLLLSIAPFFIICILFKRTKAIFDAWIKSLVQTVMQPVIIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFALLTETIDSIIQAMFNFESCDACVINPTINIGIIKITFCLLEFLLPSGFSPLSTFSDN HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH MRDSVNGDSLIFIGLPAPITKIIAFVIMVNATKHFVGSSGEMCTSIFGSFANLSSVADNA HHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KESLLGIVGMDRNTRMQRQRYNEMNSLNNQNSDGERKRSSFAAPLPAEDGNRSSRSGVSI HHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC PESPPSSFGK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA