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The map label for this gene is dnaQ [H]

Identifier: 58617240

GI number: 58617240

Start: 824448

End: 825176

Strand: Reverse

Name: dnaQ [H]

Synonym: ERGA_CDS_05130

Alternate gene names: 58617240

Gene position: 825176-824448 (Counterclockwise)

Preceding gene: 58617241

Following gene: 58617238

Centisome position: 55.01

GC content: 27.85

Gene sequence:

>729_bases
ATGTCTTATTACAATGGAATTAGAGAAATAGTATTAGATACTGAAACAACAGGGTTAGATGCAGATGGTGGAGATAGAAT
AATAGAAATGGGTTGTATTGAATTAATAGATCGTGTTTTTACAGGTAAAGTATTTCATGAGTATATTAATCCTGAACGTG
ATATACCATATTATGCAACAAAAATTCATGGTATTACTGTTGATATGTTGAAAGATAAGCCAAAATTTTCAGAAATTGCA
GATAAGTTTTTAGACTTTATTGGTAATAGTGTATTGGTTATTCATAATGCTGTATTTGATATTAAGTTTATAAAAATGGA
ACTTGATAAAATTCAAAAGAGCTATAATTCTGATTTTCAGGTTGTAGATACTCTTATTTTAGCTAGGAAGAAGTTTCCTG
GAGTGTCTTCTACATTGGATGCTTTATGTAAAAGATTTAATATTTCTTTACAAGATAGAAAGTTTCATGGAGCATTATTA
GATGCAACATTGTTAGGAAAAGTGTATGTGCAATTAATGGGGGGATTACAGAGATCTTTAAATTTTCAAGATAATAGTGG
TATGTTTCAAAGTAGTGATTACTCGCATGATGTAAGTAGATCTTATATAGAGCCACGTTTGTATAAAGTAAGTGAAGAAG
AAATAGTAAAGCATAGGATGTTATTGGAAAAGATAAAAAATCCTATTTGGAACAATATATTTTATAAAAAAAATGAAAAT
TATAATTAG

Upstream 100 bases:

>100_bases
TGTCTTTATTTAGTGGTAGCACTTATTTTGATTTATATTACTATGCTTTAGATATTTAAGTTTTTATAATAACTTAATAA
CTAAATTAAGCTAAAAACAT

Downstream 100 bases:

>100_bases
TGAATATTATTTTTGTTTACTTGAATAAGGGTATTTGTTAAAGCATATGATAAAATATAATGATACTTATAGTGGTGAAT
TTGTAATATATAGTTGTGGT

Product: DNA polymerase III, epsilon chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSYYNGIREIVLDTETTGLDADGGDRIIEMGCIELIDRVFTGKVFHEYINPERDIPYYATKIHGITVDMLKDKPKFSEIA
DKFLDFIGNSVLVIHNAVFDIKFIKMELDKIQKSYNSDFQVVDTLILARKKFPGVSSTLDALCKRFNISLQDRKFHGALL
DATLLGKVYVQLMGGLQRSLNFQDNSGMFQSSDYSHDVSRSYIEPRLYKVSEEEIVKHRMLLEKIKNPIWNNIFYKKNEN
YN

Sequences:

>Translated_242_residues
MSYYNGIREIVLDTETTGLDADGGDRIIEMGCIELIDRVFTGKVFHEYINPERDIPYYATKIHGITVDMLKDKPKFSEIA
DKFLDFIGNSVLVIHNAVFDIKFIKMELDKIQKSYNSDFQVVDTLILARKKFPGVSSTLDALCKRFNISLQDRKFHGALL
DATLLGKVYVQLMGGLQRSLNFQDNSGMFQSSDYSHDVSRSYIEPRLYKVSEEEIVKHRMLLEKIKNPIWNNIFYKKNEN
YN
>Mature_241_residues
SYYNGIREIVLDTETTGLDADGGDRIIEMGCIELIDRVFTGKVFHEYINPERDIPYYATKIHGITVDMLKDKPKFSEIAD
KFLDFIGNSVLVIHNAVFDIKFIKMELDKIQKSYNSDFQVVDTLILARKKFPGVSSTLDALCKRFNISLQDRKFHGALLD
ATLLGKVYVQLMGGLQRSLNFQDNSGMFQSSDYSHDVSRSYIEPRLYKVSEEEIVKHRMLLEKIKNPIWNNIFYKKNENY
N

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786409, Length=228, Percent_Identity=40.3508771929825, Blast_Score=169, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006309
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 28017; Mature: 27885

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYNGIREIVLDTETTGLDADGGDRIIEMGCIELIDRVFTGKVFHEYINPERDIPYYAT
CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEE
KIHGITVDMLKDKPKFSEIADKFLDFIGNSVLVIHNAVFDIKFIKMELDKIQKSYNSDFQ
EECCEEEEHHCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHH
VVDTLILARKKFPGVSSTLDALCKRFNISLQDRKFHGALLDATLLGKVYVQLMGGLQRSL
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NFQDNSGMFQSSDYSHDVSRSYIEPRLYKVSEEEIVKHRMLLEKIKNPIWNNIFYKKNEN
CCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCHHHCCCEECCCCC
YN
CC
>Mature Secondary Structure 
SYYNGIREIVLDTETTGLDADGGDRIIEMGCIELIDRVFTGKVFHEYINPERDIPYYAT
CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEE
KIHGITVDMLKDKPKFSEIADKFLDFIGNSVLVIHNAVFDIKFIKMELDKIQKSYNSDFQ
EECCEEEEHHCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHH
VVDTLILARKKFPGVSSTLDALCKRFNISLQDRKFHGALLDATLLGKVYVQLMGGLQRSL
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NFQDNSGMFQSSDYSHDVSRSYIEPRLYKVSEEEIVKHRMLLEKIKNPIWNNIFYKKNEN
CCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCHHHCCCEECCCCC
YN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA