| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617241
Identifier: 58617241
GI number: 58617241
Start: 825717
End: 827201
Strand: Reverse
Name: 58617241
Synonym: ERGA_CDS_05140
Alternate gene names: NA
Gene position: 827201-825717 (Counterclockwise)
Preceding gene: 58617242
Following gene: 58617240
Centisome position: 55.15
GC content: 31.72
Gene sequence:
>1485_bases TTGGTAATCTTTATGTGTAAATTTTCTTTGACTACAGCTTTTGTTTCTTTGCTCTTTTTGTATAATGTTGATGCATTTGC AGTTGATAATTTAGCTAAAGCTAATACAAATGATAACAAGATAACAGTTAATACTAAAAAAAATCATAGTGACATGAAGC GTGTAGTTTTGCGTAAATTAGCAAAGGGTTACCATAGGATTGAGCTAGGCGGTCAAATATTATCTTATGCTTGGTGTACA GATAATGTTAATCAATCTCAAAAGCATGGGGTAGGAGTAAGTGGTATTTTAAATGTAAAGTCTGTAAGTGAAAATCCTAA TTTAGGAATTTCTTATGGTGCTAGTCTGCAAATAGGAGTGCCAGCTATAAAGGATAAATATTTTATTCCTACTGTAAAAG CTTATAATAGAGGTGCCCAGTTATTTATTGATTCTTCTTATGGAAATATATCAATGGGTTATCAGGAAGGTGTTGATTCT ATAATGAAGATTGATGCTTTTACTATAGGGTCTGGAGATAACAGCATTACGTGGGTACAGAATTTAAATATCTTGGATAA GGATAAAAATTTAGTGTACCATGTTTTCCCTGGTTTATATACTGAAAGTTTATTTAATGGAAGTGAATCACTTGCATTGC TTAGTATTCAAGGTAGAGGTAAAGATTTTATTAATAATTTACCGTTTAGGATATCTTATCAGTCCCCTAGTTTTGCTGGG TTAAAAGTTGCTGTAAGTTATGCTCCTCTAGGATATCCTACCAGCTTGTTTGAACATGCAGATCGTGATGATTATAAAGT TGATAAATTAACAATACCTCCACTACTAGGTCCTTTACAGGAAAAAACTGCAGATAAGAAAATAGAAGAAATAGTTGCTG TATTAGGTGATAAGATAGCATTACAAGATGTTGAAATGGAGGGGTTAGCTGATTCAGGTAAGGTAAAGTTTTTAGGGCCG AATTATAAGAATATAATCAATGCAGGATTATCTTATAGTCATTCTTTTGATAGTATTGATTTTCAAGCTTCTGTTATTGC AGAATATGCTTCTAATGATGTTGAAGCTTTGAAAAAATCCTCATATTCGGGACCTCTTGTACCATTTAATGGCTTATCAG GTATTGCTGTTGGTACATCTGTTGCTTATGATAGTGTAATAGTTGCAGCGTCTTACGGATATCTAGGAAAATCTGGTCAA CCTATTAATGTTAAGGGGAATGCTTATTATTGGACTCTTGGTGCAAAGTATACTTATGATAATGCATCAATAAGTACTTC TTATTTTAGAAGTAATAATTTTGGTAATGAATTTCAAGATTTTGGTATAGGAATAGATTGTAATTTATCTGCTAATAGTA AGTATAAAGGGCAATATAAGGTATTTGGTAATTATCATCGTTTTAATGTAAAAAATATTTCAAGTACTAGCAGTGGTTCT TATGCTGGTAATGTTCTATTGTTGGGTATGAAGTATGAATTTTAA
Upstream 100 bases:
>100_bases TATTAATATGCTATATTAATAATATAAAGATTATTTCTTGACATTACCTTATATACTTGATTAAGTATTATTAATATGTT TATTTGTTGTATGAATTAAT
Downstream 100 bases:
>100_bases TTAGCCATTTAAGTGATATCTTTAATGTTTTTATAATATTGAATAAAAAAAGGTTATACTATGCTCTTAACGTTGAGTTA GTATAACTTTTTTTATAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MVIFMCKFSLTTAFVSLLFLYNVDAFAVDNLAKANTNDNKITVNTKKNHSDMKRVVLRKLAKGYHRIELGGQILSYAWCT DNVNQSQKHGVGVSGILNVKSVSENPNLGISYGASLQIGVPAIKDKYFIPTVKAYNRGAQLFIDSSYGNISMGYQEGVDS IMKIDAFTIGSGDNSITWVQNLNILDKDKNLVYHVFPGLYTESLFNGSESLALLSIQGRGKDFINNLPFRISYQSPSFAG LKVAVSYAPLGYPTSLFEHADRDDYKVDKLTIPPLLGPLQEKTADKKIEEIVAVLGDKIALQDVEMEGLADSGKVKFLGP NYKNIINAGLSYSHSFDSIDFQASVIAEYASNDVEALKKSSYSGPLVPFNGLSGIAVGTSVAYDSVIVAASYGYLGKSGQ PINVKGNAYYWTLGAKYTYDNASISTSYFRSNNFGNEFQDFGIGIDCNLSANSKYKGQYKVFGNYHRFNVKNISSTSSGS YAGNVLLLGMKYEF
Sequences:
>Translated_494_residues MVIFMCKFSLTTAFVSLLFLYNVDAFAVDNLAKANTNDNKITVNTKKNHSDMKRVVLRKLAKGYHRIELGGQILSYAWCT DNVNQSQKHGVGVSGILNVKSVSENPNLGISYGASLQIGVPAIKDKYFIPTVKAYNRGAQLFIDSSYGNISMGYQEGVDS IMKIDAFTIGSGDNSITWVQNLNILDKDKNLVYHVFPGLYTESLFNGSESLALLSIQGRGKDFINNLPFRISYQSPSFAG LKVAVSYAPLGYPTSLFEHADRDDYKVDKLTIPPLLGPLQEKTADKKIEEIVAVLGDKIALQDVEMEGLADSGKVKFLGP NYKNIINAGLSYSHSFDSIDFQASVIAEYASNDVEALKKSSYSGPLVPFNGLSGIAVGTSVAYDSVIVAASYGYLGKSGQ PINVKGNAYYWTLGAKYTYDNASISTSYFRSNNFGNEFQDFGIGIDCNLSANSKYKGQYKVFGNYHRFNVKNISSTSSGS YAGNVLLLGMKYEF >Mature_494_residues MVIFMCKFSLTTAFVSLLFLYNVDAFAVDNLAKANTNDNKITVNTKKNHSDMKRVVLRKLAKGYHRIELGGQILSYAWCT DNVNQSQKHGVGVSGILNVKSVSENPNLGISYGASLQIGVPAIKDKYFIPTVKAYNRGAQLFIDSSYGNISMGYQEGVDS IMKIDAFTIGSGDNSITWVQNLNILDKDKNLVYHVFPGLYTESLFNGSESLALLSIQGRGKDFINNLPFRISYQSPSFAG LKVAVSYAPLGYPTSLFEHADRDDYKVDKLTIPPLLGPLQEKTADKKIEEIVAVLGDKIALQDVEMEGLADSGKVKFLGP NYKNIINAGLSYSHSFDSIDFQASVIAEYASNDVEALKKSSYSGPLVPFNGLSGIAVGTSVAYDSVIVAASYGYLGKSGQ PINVKGNAYYWTLGAKYTYDNASISTSYFRSNNFGNEFQDFGIGIDCNLSANSKYKGQYKVFGNYHRFNVKNISSTSSGS YAGNVLLLGMKYEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54066; Mature: 54066
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIFMCKFSLTTAFVSLLFLYNVDAFAVDNLAKANTNDNKITVNTKKNHSDMKRVVLRKL CEEEEEEHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHH AKGYHRIELGGQILSYAWCTDNVNQSQKHGVGVSGILNVKSVSENPNLGISYGASLQIGV HCCCEEEEECCEEEEEEEECCCCCCHHHCCCCEEEEEEEEECCCCCCCCEEECCEEEECC PAIKDKYFIPTVKAYNRGAQLFIDSSYGNISMGYQEGVDSIMKIDAFTIGSGDNSITWVQ CCCCCCEECCCHHHCCCCCEEEEECCCCCEECCHHHHHHHHHEEEEEEECCCCCCEEEEE NLNILDKDKNLVYHVFPGLYTESLFNGSESLALLSIQGRGKDFINNLPFRISYQSPSFAG ECCEEECCCCEEEEECCCHHHHHHHCCCCCEEEEEECCCCHHHHCCCCEEEEECCCCCCC LKVAVSYAPLGYPTSLFEHADRDDYKVDKLTIPPLLGPLQEKTADKKIEEIVAVLGDKIA EEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEE LQDVEMEGLADSGKVKFLGPNYKNIINAGLSYSHSFDSIDFQASVIAEYASNDVEALKKS EEECCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHC SYSGPLVPFNGLSGIAVGTSVAYDSVIVAASYGYLGKSGQPINVKGNAYYWTLGAKYTYD CCCCCCCCCCCCCCEEECCHHHHCCEEEEEECCCCCCCCCEEEECCCEEEEEECCEEEEC NASISTSYFRSNNFGNEFQDFGIGIDCNLSANSKYKGQYKVFGNYHRFNVKNISSTSSGS CCCEEEHEEECCCCCCCHHHCCCCEEEECCCCCCCCCEEEEECCEEEEEECCCCCCCCCC YAGNVLLLGMKYEF CCCCEEEEEEEECC >Mature Secondary Structure MVIFMCKFSLTTAFVSLLFLYNVDAFAVDNLAKANTNDNKITVNTKKNHSDMKRVVLRKL CEEEEEEHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHH AKGYHRIELGGQILSYAWCTDNVNQSQKHGVGVSGILNVKSVSENPNLGISYGASLQIGV HCCCEEEEECCEEEEEEEECCCCCCHHHCCCCEEEEEEEEECCCCCCCCEEECCEEEECC PAIKDKYFIPTVKAYNRGAQLFIDSSYGNISMGYQEGVDSIMKIDAFTIGSGDNSITWVQ CCCCCCEECCCHHHCCCCCEEEEECCCCCEECCHHHHHHHHHEEEEEEECCCCCCEEEEE NLNILDKDKNLVYHVFPGLYTESLFNGSESLALLSIQGRGKDFINNLPFRISYQSPSFAG ECCEEECCCCEEEEECCCHHHHHHHCCCCCEEEEEECCCCHHHHCCCCEEEEECCCCCCC LKVAVSYAPLGYPTSLFEHADRDDYKVDKLTIPPLLGPLQEKTADKKIEEIVAVLGDKIA EEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEE LQDVEMEGLADSGKVKFLGPNYKNIINAGLSYSHSFDSIDFQASVIAEYASNDVEALKKS EEECCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHC SYSGPLVPFNGLSGIAVGTSVAYDSVIVAASYGYLGKSGQPINVKGNAYYWTLGAKYTYD CCCCCCCCCCCCCCEEECCHHHHCCEEEEEECCCCCCCCCEEEECCCEEEEEECCEEEEC NASISTSYFRSNNFGNEFQDFGIGIDCNLSANSKYKGQYKVFGNYHRFNVKNISSTSSGS CCCEEEHEEECCCCCCCHHHCCCCEEEECCCCCCCCCEEEEECCEEEEEECCCCCCCCCC YAGNVLLLGMKYEF CCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA