| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
Click here to switch to the map view.
The map label for this gene is 58617129
Identifier: 58617129
GI number: 58617129
Start: 664001
End: 664348
Strand: Reverse
Name: 58617129
Synonym: ERGA_CDS_04020
Alternate gene names: NA
Gene position: 664348-664001 (Counterclockwise)
Preceding gene: 58617131
Following gene: 58617128
Centisome position: 44.29
GC content: 21.26
Gene sequence:
>348_bases ATGACAAATACTTTTAATAACAAACCAGATTTTATAGAACAACAAAACCTAGATGAATTTAGCCGAGCACTTGATGATAT TATCACAAAATATCAAACAAAATTTGAAAATAAAATGGAAGATATCACATCCACCTTTTTAACTAATTTTCAACACACTT TAGAAAAAGAATTAGTATCTCTAATAAAAAAAATATACTCACATAATTTTCAAGAACTTAACAAATATCTTATAAATCAA TTGCTCAGTTCTAATAATTTACAAATACTAAATAACAATGATAAAGATATAATTATTAAAATATTTAATAAAATTTCCTC AAGTATAATAGAAAGCATTATTTTCTAA
Upstream 100 bases:
>100_bases AATTAAAAAAAAATAAATAAACATCAGTAATAATAAACTGCTTCCTTAATACTAAATCGGAAATATATAATGTACCAAAC ACCACTTATCACTTATCGAT
Downstream 100 bases:
>100_bases TCAGATTAACCATTAAAAAAACACACAAATCATAACAATGGAGTTTTATATGCTAGAAAGTTCTATGTTGTGCATTACAC GTAAATCTAATCCTATATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTNTFNNKPDFIEQQNLDEFSRALDDIITKYQTKFENKMEDITSTFLTNFQHTLEKELVSLIKKIYSHNFQELNKYLINQ LLSSNNLQILNNNDKDIIIKIFNKISSSIIESIIF
Sequences:
>Translated_115_residues MTNTFNNKPDFIEQQNLDEFSRALDDIITKYQTKFENKMEDITSTFLTNFQHTLEKELVSLIKKIYSHNFQELNKYLINQ LLSSNNLQILNNNDKDIIIKIFNKISSSIIESIIF >Mature_114_residues TNTFNNKPDFIEQQNLDEFSRALDDIITKYQTKFENKMEDITSTFLTNFQHTLEKELVSLIKKIYSHNFQELNKYLINQL LSSNNLQILNNNDKDIIIKIFNKISSSIIESIIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13611; Mature: 13479
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTFNNKPDFIEQQNLDEFSRALDDIITKYQTKFENKMEDITSTFLTNFQHTLEKELVS CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIKKIYSHNFQELNKYLINQLLSSNNLQILNNNDKDIIIKIFNKISSSIIESIIF HHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TNTFNNKPDFIEQQNLDEFSRALDDIITKYQTKFENKMEDITSTFLTNFQHTLEKELVS CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIKKIYSHNFQELNKYLINQLLSSNNLQILNNNDKDIIIKIFNKISSSIIESIIF HHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA