| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
Click here to switch to the map view.
The map label for this gene is 58616934
Identifier: 58616934
GI number: 58616934
Start: 337229
End: 338152
Strand: Reverse
Name: 58616934
Synonym: ERGA_CDS_02070
Alternate gene names: NA
Gene position: 338152-337229 (Counterclockwise)
Preceding gene: 58616935
Following gene: 58616931
Centisome position: 22.54
GC content: 30.41
Gene sequence:
>924_bases ATGTTAACTTCAGGTTTTGAAGATGATGCAAAAAAGCAACATGCTTCATCTATTGGTTTTAAAAAATTACAAGAAGACCA AAGTGATAATCAATCATCAAATGGGGATTCTCCAATACAAACAATTGATTATGATAGAATCTTTCTTGCTATATCCTTTA TTTCTCTTGTAGTAGAAGCAGCATCATCTATATTCAATTTAGTATCAACACAAGTCAGTGTAGCAGAAAATATTAAGCGT ACACTCGCTATTACTTTCTACATAATTCATACTATACTTACTATTTGCGCAATTGTAAATTCAGCACTTGCAATAAAACA AGCAGTAGATATTAAACGCAAAAATAAGAAAGAAATTTCATGTAATAGTTATGAAATGCACTCAAATAATCTACAAATTT CTGAAAATTCTTTAACTATTATATCACAGGTATTATGGATTATAGTTTGTGTATCATCGTTAGTAATGCTATACATGTCT AGTAATTCACAATTAGAACAAGCTTTATTATACATATCGGTTTTAGCTCCTTTATTAGGTGTACTTTCTTGTGTTTTAAG GTTATCAGATTCTACAATTAGACATAAGAATCCAGATTCTCCACTTGATCAGAAAAGGAATGCTAAGTGGCTTTCAATCT TGTATGGTATTGTTTTATGTTTTGAAATAGCTCATTGTGCATGTCATATAATTGAAGCAATGTCACTAGAAGGAAGAATG CAAGATATTTATGATTTTTCAAACTTACCTGTACTTGCTATAGAATTGGCAACAATATTTGCATTTGCACTTGCACTTAT TGTAGAACAATGTCTTAATAAGCCTTCCAAAGAAGAAGCTGAAAAATCTAGCTCTCCAGTTACTGTACCTTTAGTAGAGG AAATTGAAACTCTAAAGCCTATGCAGCATTGTAAATCTGTATAA
Upstream 100 bases:
>100_bases AATAAGAATAAATTGTAGACAGCAAGTAATTGGTTTATACTTTACTAAGTTTGCTTGAAAAAGTTCTTATTATTTATCTG AAAGTTATGGGGGTAATATT
Downstream 100 bases:
>100_bases AATATCCACAATGTAGCTCTCATAACATATGAGAGTTGCAGCTTTATGGTCTATATCACCATTATTAATGATATGTTGGT TTTATGATAGAGTACTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MLTSGFEDDAKKQHASSIGFKKLQEDQSDNQSSNGDSPIQTIDYDRIFLAISFISLVVEAASSIFNLVSTQVSVAENIKR TLAITFYIIHTILTICAIVNSALAIKQAVDIKRKNKKEISCNSYEMHSNNLQISENSLTIISQVLWIIVCVSSLVMLYMS SNSQLEQALLYISVLAPLLGVLSCVLRLSDSTIRHKNPDSPLDQKRNAKWLSILYGIVLCFEIAHCACHIIEAMSLEGRM QDIYDFSNLPVLAIELATIFAFALALIVEQCLNKPSKEEAEKSSSPVTVPLVEEIETLKPMQHCKSV
Sequences:
>Translated_307_residues MLTSGFEDDAKKQHASSIGFKKLQEDQSDNQSSNGDSPIQTIDYDRIFLAISFISLVVEAASSIFNLVSTQVSVAENIKR TLAITFYIIHTILTICAIVNSALAIKQAVDIKRKNKKEISCNSYEMHSNNLQISENSLTIISQVLWIIVCVSSLVMLYMS SNSQLEQALLYISVLAPLLGVLSCVLRLSDSTIRHKNPDSPLDQKRNAKWLSILYGIVLCFEIAHCACHIIEAMSLEGRM QDIYDFSNLPVLAIELATIFAFALALIVEQCLNKPSKEEAEKSSSPVTVPLVEEIETLKPMQHCKSV >Mature_307_residues MLTSGFEDDAKKQHASSIGFKKLQEDQSDNQSSNGDSPIQTIDYDRIFLAISFISLVVEAASSIFNLVSTQVSVAENIKR TLAITFYIIHTILTICAIVNSALAIKQAVDIKRKNKKEISCNSYEMHSNNLQISENSLTIISQVLWIIVCVSSLVMLYMS SNSQLEQALLYISVLAPLLGVLSCVLRLSDSTIRHKNPDSPLDQKRNAKWLSILYGIVLCFEIAHCACHIIEAMSLEGRM QDIYDFSNLPVLAIELATIFAFALALIVEQCLNKPSKEEAEKSSSPVTVPLVEEIETLKPMQHCKSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34058; Mature: 34058
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSGFEDDAKKQHASSIGFKKLQEDQSDNQSSNGDSPIQTIDYDRIFLAISFISLVVEA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHH ASSIFNLVSTQVSVAENIKRTLAITFYIIHTILTICAIVNSALAIKQAVDIKRKNKKEIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC CNSYEMHSNNLQISENSLTIISQVLWIIVCVSSLVMLYMSSNSQLEQALLYISVLAPLLG CCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLSCVLRLSDSTIRHKNPDSPLDQKRNAKWLSILYGIVLCFEIAHCACHIIEAMSLEGRM HHHHHHHHCCCHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QDIYDFSNLPVLAIELATIFAFALALIVEQCLNKPSKEEAEKSSSPVTVPLVEEIETLKP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEHHHHHHHHHHH MQHCKSV HHHHCCC >Mature Secondary Structure MLTSGFEDDAKKQHASSIGFKKLQEDQSDNQSSNGDSPIQTIDYDRIFLAISFISLVVEA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHH ASSIFNLVSTQVSVAENIKRTLAITFYIIHTILTICAIVNSALAIKQAVDIKRKNKKEIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC CNSYEMHSNNLQISENSLTIISQVLWIIVCVSSLVMLYMSSNSQLEQALLYISVLAPLLG CCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLSCVLRLSDSTIRHKNPDSPLDQKRNAKWLSILYGIVLCFEIAHCACHIIEAMSLEGRM HHHHHHHHCCCHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QDIYDFSNLPVLAIELATIFAFALALIVEQCLNKPSKEEAEKSSSPVTVPLVEEIETLKP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEHHHHHHHHHHH MQHCKSV HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA