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The map label for this gene is atpH

Identifier: 58616802

GI number: 58616802

Start: 123066

End: 123635

Strand: Reverse

Name: atpH

Synonym: ERGA_CDS_00750

Alternate gene names: 58616802

Gene position: 123635-123066 (Counterclockwise)

Preceding gene: 58616803

Following gene: 58616801

Centisome position: 8.24

GC content: 31.4

Gene sequence:

>570_bases
ATGACTCAGTATAGAGGTGGCTATGTAACGTCTTGTTATGCTCAAGCATTATTCAACGCATCAGTTAGTAAGTTGAATGA
CATTTGTAAAGGGATAAAGTTTATTTTTAATCTTTCTGAAAATGGCAATAACCAGTTTCTTTCATTCCTTGCTAACCCTA
CTGCAAACCTTAAGGATAAAATAAGTGTGATAGAACTCATCACAAACCATATTGATACAACATTAAGTAGGTTTATACTA
GTTGTGGTTACAAACAATAGGGGAAATATGTTATTGCAAATCTTCAATACTTTTCTTGAATATGTAAGAAAACACAACAA
AGAAGTTAGTATATCTGTTACTTCATGTAGTAAACTCACTACTCAAGAAAAACAAGGTATCTGCAATGCATTACTTGAAA
AATATGGTAAGGTAGTTAGTATAACAAATACTGTAGATCCAAGCATTTTAGGTGGTTTTATTATCAGAGTAGGTTTTGAC
ATAATTGACGTATCATTAAATAGTTATTTACAAAGTTTACAGGAACTCAGTAAAATAGCGGTACGTAGTATGGTGAATAG
CAAGGTGTAA

Upstream 100 bases:

>100_bases
CAAATTTGCTGTTTTAGCTTATACATCACAGCACAAAATACTTGACTGGGTTTAGTATAATGTATAACATTTTGCTGTTT
TATGTTTCCTTTCAAGTTGT

Downstream 100 bases:

>100_bases
TAATGATATCTGCGGGTGAAGTGTTAAAGGTTATTAAGGAACGTATCGAGAATTTTGATGGTCAGGTAAAATGTGAAAGT
GTTGGCGAAGTTATATCTGT

Product: ATP synthase delta chain

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTQYRGGYVTSCYAQALFNASVSKLNDICKGIKFIFNLSENGNNQFLSFLANPTANLKDKISVIELITNHIDTTLSRFIL
VVVTNNRGNMLLQIFNTFLEYVRKHNKEVSISVTSCSKLTTQEKQGICNALLEKYGKVVSITNTVDPSILGGFIIRVGFD
IIDVSLNSYLQSLQELSKIAVRSMVNSKV

Sequences:

>Translated_189_residues
MTQYRGGYVTSCYAQALFNASVSKLNDICKGIKFIFNLSENGNNQFLSFLANPTANLKDKISVIELITNHIDTTLSRFIL
VVVTNNRGNMLLQIFNTFLEYVRKHNKEVSISVTSCSKLTTQEKQGICNALLEKYGKVVSITNTVDPSILGGFIIRVGFD
IIDVSLNSYLQSLQELSKIAVRSMVNSKV
>Mature_188_residues
TQYRGGYVTSCYAQALFNASVSKLNDICKGIKFIFNLSENGNNQFLSFLANPTANLKDKISVIELITNHIDTTLSRFILV
VVTNNRGNMLLQIFNTFLEYVRKHNKEVSISVTSCSKLTTQEKQGICNALLEKYGKVVSITNTVDPSILGGFIIRVGFDI
IDVSLNSYLQSLQELSKIAVRSMVNSKV

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=173, Percent_Identity=27.7456647398844, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71984717, Length=173, Percent_Identity=27.7456647398844, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_EHRRG (Q5FF65)

Other databases:

- EMBL:   CR925677
- RefSeq:   YP_196001.1
- ProteinModelPortal:   Q5FF65
- SMR:   Q5FF65
- STRING:   Q5FF65
- GeneID:   3268498
- GenomeReviews:   CR925677_GR
- KEGG:   erg:ERGA_CDS_00750
- eggNOG:   COG0712
- HOGENOM:   HBG750978
- OMA:   NANKDFV
- ProtClustDB:   CLSK749305
- BioCyc:   ERUM302409:ERGA_CDS_00750-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 21043; Mature: 20911

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYRGGYVTSCYAQALFNASVSKLNDICKGIKFIFNLSENGNNQFLSFLANPTANLKDK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHH
ISVIELITNHIDTTLSRFILVVVTNNRGNMLLQIFNTFLEYVRKHNKEVSISVTSCSKLT
HHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHHH
TQEKQGICNALLEKYGKVVSITNTVDPSILGGFIIRVGFDIIDVSLNSYLQSLQELSKIA
HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRSMVNSKV
HHHHHHCCC
>Mature Secondary Structure 
TQYRGGYVTSCYAQALFNASVSKLNDICKGIKFIFNLSENGNNQFLSFLANPTANLKDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHH
ISVIELITNHIDTTLSRFILVVVTNNRGNMLLQIFNTFLEYVRKHNKEVSISVTSCSKLT
HHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHHH
TQEKQGICNALLEKYGKVVSITNTVDPSILGGFIIRVGFDIIDVSLNSYLQSLQELSKIA
HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRSMVNSKV
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA