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The map label for this gene is rpsT

Identifier: 58616764

GI number: 58616764

Start: 47509

End: 47796

Strand: Reverse

Name: rpsT

Synonym: ERGA_CDS_00370

Alternate gene names: 58616764

Gene position: 47796-47509 (Counterclockwise)

Preceding gene: 58616765

Following gene: 58616760

Centisome position: 3.19

GC content: 31.94

Gene sequence:

>288_bases
ATGGCAAATCATCCAAGTGCTAAAAAGATGATAAAAGTAATAAAAAAACGCACTATGATTAATCGCATGCGAAAGAGTAG
AGCACATAATTACATAAAAAAGTTTATGGCCGCTTTAGCAGCAGGGAATAAGGAGCTAATGCTTGAGAACTTTAAAAAAG
CTGAATCAAATCTACACAGATGTGTTAATAAGAAAATCATACATCGAAATACAGCAGCAAGAAAAATTAGTCGTTTAGCT
TTAAAATTGAAAACTTTTGACTTACAGCAACAAGAAAAAGCTTCTTAG

Upstream 100 bases:

>100_bases
TATTATTCCTTACATAAATACACTTCATACAAAACCTCTTGCATTGATTAGCAATTACTTATACAGTTATATGCTGAATG
ATAAGATAGGTTATTAAGAT

Downstream 100 bases:

>100_bases
TCATATTAAGAGGCTGTGTGTATGTTTTGTTAGTATGTCTATTTCATGTAAGGTTGAGTGTTTTTTTCTAGTTTATATTG
TTAGTATCTTAAGTATATAA

Product: 30S ribosomal protein S20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MANHPSAKKMIKVIKKRTMINRMRKSRAHNYIKKFMAALAAGNKELMLENFKKAESNLHRCVNKKIIHRNTAARKISRLA
LKLKTFDLQQQEKAS

Sequences:

>Translated_95_residues
MANHPSAKKMIKVIKKRTMINRMRKSRAHNYIKKFMAALAAGNKELMLENFKKAESNLHRCVNKKIIHRNTAARKISRLA
LKLKTFDLQQQEKAS
>Mature_94_residues
ANHPSAKKMIKVIKKRTMINRMRKSRAHNYIKKFMAALAAGNKELMLENFKKAESNLHRCVNKKIIHRNTAARKISRLAL
KLKTFDLQQQEKAS

Specific function: Binds directly to 16S ribosomal RNA

COG id: COG0268

COG function: function code J; Ribosomal protein S20

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S20P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS20_EHRRG (Q5FF55)

Other databases:

- EMBL:   CR925677
- RefSeq:   YP_195963.1
- ProteinModelPortal:   Q5FF55
- SMR:   Q5FF55
- STRING:   Q5FF55
- GeneID:   3268335
- GenomeReviews:   CR925677_GR
- KEGG:   erg:ERGA_CDS_00370
- eggNOG:   COG0268
- HOGENOM:   HBG734145
- OMA:   RTQMRGA
- ProtClustDB:   PRK00239
- BioCyc:   ERUM302409:ERGA_CDS_00370-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00500
- InterPro:   IPR002583
- Gene3D:   G3DSA:1.20.58.110
- ProDom:   PD004231
- TIGRFAMs:   TIGR00029

Pfam domain/function: PF01649 Ribosomal_S20p; SSF46992 Ribosomal_S20p

EC number: NA

Molecular weight: Translated: 11060; Mature: 10929

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANHPSAKKMIKVIKKRTMINRMRKSRAHNYIKKFMAALAAGNKELMLENFKKAESNLHR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
CVNKKIIHRNTAARKISRLALKLKTFDLQQQEKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
ANHPSAKKMIKVIKKRTMINRMRKSRAHNYIKKFMAALAAGNKELMLENFKKAESNLHR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
CVNKKIIHRNTAARKISRLALKLKTFDLQQQEKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA