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The map label for this gene is trbG [H]

Identifier: 58616743

GI number: 58616743

Start: 16996

End: 17799

Strand: Reverse

Name: trbG [H]

Synonym: ERGA_CDS_00160

Alternate gene names: 58616743

Gene position: 17799-16996 (Counterclockwise)

Preceding gene: 58616744

Following gene: 58616742

Centisome position: 1.19

GC content: 26.62

Gene sequence:

>804_bases
ATGATGAATTTTTATAAGATTTTTACAATATTATTAGCACTAGTTACAGTAAGTAATAGTGCATACGCTGTAAATGAAAA
TAATAATCCAATAGCAATAGACAGTAGGATTAAGACTTTCATATACAGTAATAACGAAGTTTACGATGTAGTATTTAACT
ATGGCTATCATTCATATATAGAGTTTTCAAAGGGAGAAACTATAAAAATGCTAGCAATGGGTGATACTGCAAGCTGGAAA
GTCAGACCAATAGGAAATAAATTATTCATCATGCCATTGGAAAAAAATGGAAAAACAAACATGCTAATAGAAACTAGTAA
AGGAAGAAGTTACGCCTTTGATCTCATATGCCGTAGTGAAAATAATTCCAATAACGATAAAAAGGAAAATGACGCTGGAT
ACTCTGAGCTAAGAGATCTAGCTTATATAGTACGTTTCTATTATCCAAAAACTGAAGAGGAATTTGAATTAAATAAAATA
AAGGTACCAGATATTTCTATACCTAAATCTAATAATGTAATTATAAAACCTAACTCTACAAAACACAATTATACTATAGA
TAATCAAATAGAAGATAATAAAATATCACCAGTAGAATTATTTGATGATGGAAAATTAACATACTTTAAGTTTGCAAATA
ATAATAAGATTATTCCACAAATATTTACATATAACAATTCTGGTCAAAAGGTACCCTGTAAAATGCTATTATTACAAAAC
TATGTAATAATAAAGGGTGTACATAAAAATTTATATATTCAATATAAGAATGAATTCATAAACATTACTAACAAGCATTT
ATAA

Upstream 100 bases:

>100_bases
AGGATAGCTACTTTGTCATTCCAATATGCAACTCTCGAAATGAATGAGCAAGAACGTCAAGTCAATCCTTTAGGATTTCA
AATAACTTACTATAGGGCAG

Downstream 100 bases:

>100_bases
TAAAACTCATATGGTACACTATGTCAGAAGAAAATTACAATAACCACAATAACATAGAACTTGAAGAAAGTGTCAATGTT
GTAGGAACACATAAAGGAAA

Product: putative conjugal transfer protein trbG precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MMNFYKIFTILLALVTVSNSAYAVNENNNPIAIDSRIKTFIYSNNEVYDVVFNYGYHSYIEFSKGETIKMLAMGDTASWK
VRPIGNKLFIMPLEKNGKTNMLIETSKGRSYAFDLICRSENNSNNDKKENDAGYSELRDLAYIVRFYYPKTEEEFELNKI
KVPDISIPKSNNVIIKPNSTKHNYTIDNQIEDNKISPVELFDDGKLTYFKFANNNKIIPQIFTYNNSGQKVPCKMLLLQN
YVIIKGVHKNLYIQYKNEFINITNKHL

Sequences:

>Translated_267_residues
MMNFYKIFTILLALVTVSNSAYAVNENNNPIAIDSRIKTFIYSNNEVYDVVFNYGYHSYIEFSKGETIKMLAMGDTASWK
VRPIGNKLFIMPLEKNGKTNMLIETSKGRSYAFDLICRSENNSNNDKKENDAGYSELRDLAYIVRFYYPKTEEEFELNKI
KVPDISIPKSNNVIIKPNSTKHNYTIDNQIEDNKISPVELFDDGKLTYFKFANNNKIIPQIFTYNNSGQKVPCKMLLLQN
YVIIKGVHKNLYIQYKNEFINITNKHL
>Mature_267_residues
MMNFYKIFTILLALVTVSNSAYAVNENNNPIAIDSRIKTFIYSNNEVYDVVFNYGYHSYIEFSKGETIKMLAMGDTASWK
VRPIGNKLFIMPLEKNGKTNMLIETSKGRSYAFDLICRSENNSNNDKKENDAGYSELRDLAYIVRFYYPKTEEEFELNKI
KVPDISIPKSNNVIIKPNSTKHNYTIDNQIEDNKISPVELFDDGKLTYFKFANNNKIIPQIFTYNNSGQKVPCKMLLLQN
YVIIKGVHKNLYIQYKNEFINITNKHL

Specific function: Component of the type IV secretion system virB/virD4 which could be a major virulence determinant for subversion of human endothelial cell (HEC) function [H]

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 30994; Mature: 30994

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNFYKIFTILLALVTVSNSAYAVNENNNPIAIDSRIKTFIYSNNEVYDVVFNYGYHSYI
CCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECEEEEEEECCCEEEEEEEECCCEEEE
EFSKGETIKMLAMGDTASWKVRPIGNKLFIMPLEKNGKTNMLIETSKGRSYAFDLICRSE
EECCCCEEEEEEECCCCCEEEEECCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEEECC
NNSNNDKKENDAGYSELRDLAYIVRFYYPKTEEEFELNKIKVPDISIPKSNNVIIKPNST
CCCCCCCCCCCCCHHHHHHHHEEHHEECCCCCCCEEECEEECCCCCCCCCCCEEECCCCC
KHNYTIDNQIEDNKISPVELFDDGKLTYFKFANNNKIIPQIFTYNNSGQKVPCKMLLLQN
CCCEEECCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCCEEEECCC
YVIIKGVHKNLYIQYKNEFINITNKHL
EEEEEEECCEEEEEEECCEEEEECCCC
>Mature Secondary Structure
MMNFYKIFTILLALVTVSNSAYAVNENNNPIAIDSRIKTFIYSNNEVYDVVFNYGYHSYI
CCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECEEEEEEECCCEEEEEEEECCCEEEE
EFSKGETIKMLAMGDTASWKVRPIGNKLFIMPLEKNGKTNMLIETSKGRSYAFDLICRSE
EECCCCEEEEEEECCCCCEEEEECCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEEECC
NNSNNDKKENDAGYSELRDLAYIVRFYYPKTEEEFELNKIKVPDISIPKSNNVIIKPNST
CCCCCCCCCCCCCHHHHHHHHEEHHEECCCCCCCEEECEEECCCCCCCCCCCEEECCCCC
KHNYTIDNQIEDNKISPVELFDDGKLTYFKFANNNKIIPQIFTYNNSGQKVPCKMLLLQN
CCCEEECCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCCEEEECCC
YVIIKGVHKNLYIQYKNEFINITNKHL
EEEEEEECCEEEEEEECCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA