| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58616734
Identifier: 58616734
GI number: 58616734
Start: 5434
End: 5970
Strand: Reverse
Name: 58616734
Synonym: ERGA_CDS_00070
Alternate gene names: NA
Gene position: 5970-5434 (Counterclockwise)
Preceding gene: 161986614
Following gene: 58616732
Centisome position: 0.4
GC content: 27.19
Gene sequence:
>537_bases ATGCAACAAAAAACATGTAACTTATTTTTATCTAATAAAAACATAAAAAATTGTGGAATTTTTTCAGGTTATGCAAGCGT ATTTAATGTTGTCGATAGACAAAAAGATATAATAATACCAGGAGCATTTAGTGCTACTATAAAAGATTTCCATAGAGTAA AATTGCTATGGCAACATAATTCTACAGAACCTATAGGGAATATTATAAGTATGAGTGAGGATCACATAGGACTTTATGTA AAAGCAAACTTACTACTAGACTTACAAAAAGGAAAAGAAGCATATCTAATGCTCAAAAACGGTATCATTAATGCATTATC TATAGGATATCAAGCAGTAGATTATAACACAGACTTTAAAACAGGAATAAGAACATTAAAAAAAATCTCCCTATGGGAAA TTAGTTTAGTAACATTTCCAGCTAATACACAATCAAAAGTTATCGACGTTAAAAATATTCAGAAAAATCCAATTACATCA TATTTTATAAAAGCTAAATCTGTATTAGATAACTTAAAATCAATGATCGACTTTTAA
Upstream 100 bases:
>100_bases AACAACAAATCCAAGTGTTTTGACTAAAATCTCAACTAAATTACAAAATTAAGTAATATATTACTTAAACTCCAAATTTT TCAACTAATATAAACTTTTT
Downstream 100 bases:
>100_bases TCAATCTTTCCAACATTACTCAAATCAATAACAATCTTATATATACATCTATCATCTGCTTCTTTAATATAAAATACAGC ACCACTTTTATGTTCAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; Phage Protease; Prohead Protease; Phage Pro-Head Protease; Head Maturation Protease; Phage Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Prophage LambdaSa2 Protease; Phage Prohead Protease And Phage Capsid Protein
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MQQKTCNLFLSNKNIKNCGIFSGYASVFNVVDRQKDIIIPGAFSATIKDFHRVKLLWQHNSTEPIGNIISMSEDHIGLYV KANLLLDLQKGKEAYLMLKNGIINALSIGYQAVDYNTDFKTGIRTLKKISLWEISLVTFPANTQSKVIDVKNIQKNPITS YFIKAKSVLDNLKSMIDF
Sequences:
>Translated_178_residues MQQKTCNLFLSNKNIKNCGIFSGYASVFNVVDRQKDIIIPGAFSATIKDFHRVKLLWQHNSTEPIGNIISMSEDHIGLYV KANLLLDLQKGKEAYLMLKNGIINALSIGYQAVDYNTDFKTGIRTLKKISLWEISLVTFPANTQSKVIDVKNIQKNPITS YFIKAKSVLDNLKSMIDF >Mature_178_residues MQQKTCNLFLSNKNIKNCGIFSGYASVFNVVDRQKDIIIPGAFSATIKDFHRVKLLWQHNSTEPIGNIISMSEDHIGLYV KANLLLDLQKGKEAYLMLKNGIINALSIGYQAVDYNTDFKTGIRTLKKISLWEISLVTFPANTQSKVIDVKNIQKNPITS YFIKAKSVLDNLKSMIDF
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20107; Mature: 20107
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQKTCNLFLSNKNIKNCGIFSGYASVFNVVDRQKDIIIPGAFSATIKDFHRVKLLWQHN CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHEEEEEECC STEPIGNIISMSEDHIGLYVKANLLLDLQKGKEAYLMLKNGIINALSIGYQAVDYNTDFK CCCCCHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCEEHHHCCEEEEECCCCHH TGIRTLKKISLWEISLVTFPANTQSKVIDVKNIQKNPITSYFIKAKSVLDNLKSMIDF HHHHHHHHCEEEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQQKTCNLFLSNKNIKNCGIFSGYASVFNVVDRQKDIIIPGAFSATIKDFHRVKLLWQHN CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHEEEEEECC STEPIGNIISMSEDHIGLYVKANLLLDLQKGKEAYLMLKNGIINALSIGYQAVDYNTDFK CCCCCHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCEEHHHCCEEEEECCCCHH TGIRTLKKISLWEISLVTFPANTQSKVIDVKNIQKNPITSYFIKAKSVLDNLKSMIDF HHHHHHHHCEEEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA