| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 161986614
Identifier: 161986614
GI number: 161986614
Start: 6339
End: 7523
Strand: Reverse
Name: 161986614
Synonym: ERGA_CDS_00080
Alternate gene names: NA
Gene position: 7523-6339 (Counterclockwise)
Preceding gene: 58616738
Following gene: 58616734
Centisome position: 0.5
GC content: 30.13
Gene sequence:
>1185_bases ATGAACTTCTTTTTAAAGAAAAAATCCATCTTAGACAATTCTTATACCTTTTCAATTCCTATACAATTAACTGCTGAAGC AATATGGAAAAGTAGAGATTATAGAAGTTTTGCAGAAAATGGATACATAAAAAATGTAATTGCATTTAGATCAATTCATA TGATTGCTTCTGCAGCAGCATCTGTTCCTATTATTTTAAATAAGAATATAAAAAATGATACATTTCAAATAAAAAATCAT CCACTATTAAAATTAATATCACAACCTAATAATACAATCTCAAAAGCGGAATTTATTGAAGGTATTCTCACCTATAAACT AATTAGCGGTAATGCCTATATTTTGATGATAGAAAATAATAACATGGTTCCTAAAGAATTACATTTATTACGACCAGATA GAGTAGAAATTATTCCAGGAAGAGATAATAGACCATATTCTTATCGCTATGCAATAAATGACTACACTCTTGACTACAAG ATTAATAAATTAACAAATTACTCACAAATATTACATATAAAAAATTTCCATCCATTAAATGACTGGTATGGATTATCTCC TATAGAAGCAGCTTCATATAGTATAGACCAACATAATCAGGCTGGATCTTGGAATCAAGCAATGTTACAAAATGGAGCAA GACCAAGTGGAGCTTTAATTGTGAATGCAAAAAATACCAATAATGGTAGTTTAACTCAAGAACAATATAATCGTTTAAAA GCTCAAGTTGACGACTTTTATTCAGGACCAAGAAATGCAGGTAGACCTATATTATTAGAAGGAGGACTAGAATGGAAAGA GATGAGTCTATCTCCCAAAGATATGGATTTCATAGAATCAAAACATAGTTCAGCACGTGATATTGCATTAGCATTTGGAG TACCACCACAATTACTAGGCATACCAGGAGATAATACTTACAGCAATCTTATAGAAGCAAGGCTATCACTATGGGAACAA ACAGTACTACCACATTTAGATAACATTATTTCACACTTTAACAATTGGTTAACTCCTAAATTTGGAAATAACATATTCCT ATCGTATGATAAAGATTCTATTTCTGTACTCACAGAAAAAAGAAAACAATTATGGCAATACGTAGAGAATGCAACTTTTA TGACTATAAATGAAAAAAGAGCTGCTTTTGGATTACCACCACTAGATAACGGAAATATACTATAA
Upstream 100 bases:
>100_bases TATCTGCATGATAATCATTAACTACTTCATAAATCTTGTACTATCAGTATATGCTGAAATGAAAACAACTCAATAAAAAT TATACACTATGAGTTTAAAT
Downstream 100 bases:
>100_bases ATAATAGGCAATCAAAGAATACTACTCAAATAATCATTTTGAATTTGCTATCTAATTTATGTAAAATAAAGGAGCTTATA AACAATATAACCAAACCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MNFFLKKKSILDNSYTFSIPIQLTAEAIWKSRDYRSFAENGYIKNVIAFRSIHMIASAAASVPIILNKNIKNDTFQIKNH PLLKLISQPNNTISKAEFIEGILTYKLISGNAYILMIENNNMVPKELHLLRPDRVEIIPGRDNRPYSYRYAINDYTLDYK INKLTNYSQILHIKNFHPLNDWYGLSPIEAASYSIDQHNQAGSWNQAMLQNGARPSGALIVNAKNTNNGSLTQEQYNRLK AQVDDFYSGPRNAGRPILLEGGLEWKEMSLSPKDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLIEARLSLWEQ TVLPHLDNIISHFNNWLTPKFGNNIFLSYDKDSISVLTEKRKQLWQYVENATFMTINEKRAAFGLPPLDNGNIL
Sequences:
>Translated_394_residues MNFFLKKKSILDNSYTFSIPIQLTAEAIWKSRDYRSFAENGYIKNVIAFRSIHMIASAAASVPIILNKNIKNDTFQIKNH PLLKLISQPNNTISKAEFIEGILTYKLISGNAYILMIENNNMVPKELHLLRPDRVEIIPGRDNRPYSYRYAINDYTLDYK INKLTNYSQILHIKNFHPLNDWYGLSPIEAASYSIDQHNQAGSWNQAMLQNGARPSGALIVNAKNTNNGSLTQEQYNRLK AQVDDFYSGPRNAGRPILLEGGLEWKEMSLSPKDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLIEARLSLWEQ TVLPHLDNIISHFNNWLTPKFGNNIFLSYDKDSISVLTEKRKQLWQYVENATFMTINEKRAAFGLPPLDNGNIL >Mature_394_residues MNFFLKKKSILDNSYTFSIPIQLTAEAIWKSRDYRSFAENGYIKNVIAFRSIHMIASAAASVPIILNKNIKNDTFQIKNH PLLKLISQPNNTISKAEFIEGILTYKLISGNAYILMIENNNMVPKELHLLRPDRVEIIPGRDNRPYSYRYAINDYTLDYK INKLTNYSQILHIKNFHPLNDWYGLSPIEAASYSIDQHNQAGSWNQAMLQNGARPSGALIVNAKNTNNGSLTQEQYNRLK AQVDDFYSGPRNAGRPILLEGGLEWKEMSLSPKDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLIEARLSLWEQ TVLPHLDNIISHFNNWLTPKFGNNIFLSYDKDSISVLTEKRKQLWQYVENATFMTINEKRAAFGLPPLDNGNIL
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phage portal family. HK97 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006944 - InterPro: IPR006427 [H]
Pfam domain/function: PF04860 Phage_portal [H]
EC number: NA
Molecular weight: Translated: 44901; Mature: 44901
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFFLKKKSILDNSYTFSIPIQLTAEAIWKSRDYRSFAENGYIKNVIAFRSIHMIASAAA CCCEECCHHHCCCCEEEEEEEEEEHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHC SVPIILNKNIKNDTFQIKNHPLLKLISQPNNTISKAEFIEGILTYKLISGNAYILMIENN CCCEEEECCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHEEEEECCCEEEEEEECC NMVPKELHLLRPDRVEIIPGRDNRPYSYRYAINDYTLDYKINKLTNYSQILHIKNFHPLN CCCHHHHHEECCCCEEEEECCCCCCEEEEEEEECEEEEEEECCCCCCCCEEEECCCCCCC DWYGLSPIEAASYSIDQHNQAGSWNQAMLQNGARPSGALIVNAKNTNNGSLTQEQYNRLK CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHH AQVDDFYSGPRNAGRPILLEGGLEWKEMSLSPKDMDFIESKHSSARDIALAFGVPPQLLG HHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCHHHEE IPGDNTYSNLIEARLSLWEQTVLPHLDNIISHFNNWLTPKFGNNIFLSYDKDSISVLTEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHH RKQLWQYVENATFMTINEKRAAFGLPPLDNGNIL HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFFLKKKSILDNSYTFSIPIQLTAEAIWKSRDYRSFAENGYIKNVIAFRSIHMIASAAA CCCEECCHHHCCCCEEEEEEEEEEHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHC SVPIILNKNIKNDTFQIKNHPLLKLISQPNNTISKAEFIEGILTYKLISGNAYILMIENN CCCEEEECCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHEEEEECCCEEEEEEECC NMVPKELHLLRPDRVEIIPGRDNRPYSYRYAINDYTLDYKINKLTNYSQILHIKNFHPLN CCCHHHHHEECCCCEEEEECCCCCCEEEEEEEECEEEEEEECCCCCCCCEEEECCCCCCC DWYGLSPIEAASYSIDQHNQAGSWNQAMLQNGARPSGALIVNAKNTNNGSLTQEQYNRLK CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHH AQVDDFYSGPRNAGRPILLEGGLEWKEMSLSPKDMDFIESKHSSARDIALAFGVPPQLLG HHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCHHHEE IPGDNTYSNLIEARLSLWEQTVLPHLDNIISHFNNWLTPKFGNNIFLSYDKDSISVLTEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHH RKQLWQYVENATFMTINEKRAAFGLPPLDNGNIL HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA