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The map label for this gene is mcpB [C]

Identifier: 56965807

GI number: 56965807

Start: 4222405

End: 4224414

Strand: Direct

Name: mcpB [C]

Synonym: ABC4049

Alternate gene names: 56965807

Gene position: 4222405-4224414 (Clockwise)

Preceding gene: 56965806

Following gene: 56965808

Centisome position: 98.11

GC content: 45.07

Gene sequence:

>2010_bases
GTGAAAAACAAATGGACGACGCTTAAGCATTGGCCTTTAAAAGCAAAGCTCATTACAGCCTTTGCCATTGTGCTAGCCAT
TCCAAGTGCCATTATTGGCATAAGCTCATACCAAAGTGCGAAGGGCAATATCATTTCGAGCATGAGCGAGGCAAATCAAG
AAAGTTTACAAATCATTAATCGCACAATCGACTTATTTATAGAAGGGCAAATCGAAAACATTGAATATGTCGCCCTTGCA
AGCGACGCAGAAGCATTTTTAGAAGAAGAAACAGAAGAGCAGCGCACCTTGTTGCAGACGTTTCAAGAAACAAAAACCCA
TGTGGAGCAAACCTTTGTAGGGACAACAGCAGGAAATTTTATGAACGAACCGACGTCGTTTCAGAACCCTCCTGACTATG
ACCCAAGGGAACGCCCTTGGTACCAGCAAGCGATGGAACAAACAGGGGAAACGATTATCACAGCCCCTTATATTTCCAAT
TCATCCAATGAACCAGTTGTCACAATCGCTAAAACAACAGCAGATGAACACGGCGTCGCTGCCCTTAATTTGCAGTTAGA
CGCCATAACCGATTTACTATCGACAATCTCCATCGGTGAAAATGGATACGTGTTTATTATTGACCAGAATAACGCTTATG
TTTCCCATCCACATGAAGAGTTAGGAAGCGAAGCGAGTGAGTTTTTCTTACAGCTGCATGACTCGGAAGAAGGCGAATTA
GATTACCAGTCGGAAACAGATGATGAAAACCTCAACCTTCATTATACAACGAATGACCGTACAGGCTGGAAAATTGTCTC
CGCCATGTACGAAACAGAGATTGAACGTGCAGTAGCGCCAATTTTAAATACGACTTTATTCGTCATTTTTCTTTCTTTAC
TAGGCGGCGCCGTCCTTGTTTACATTTTGACACGGTCGATTGTCTCCCCTATCCAGAGACTCACGACAGCAGCCGAGAAA
ATGGGTGAAGGGGACTTGGCCGTAACTTTTAAAGTCGATAAAAACCAAAACGATGAAATCGGCAGATTAGGCAAGTCATT
TGAAAAAATGCGCAATGCCCTGGCAACCATGATTGCCCATATTCAAGACAAATCCCACCAATTGTCTGCTTCTGCTGAAG
AAGTCATGGCCATCTCCGGAGAAAACACACGTGCCACCGAACAAATTGCCAATTCGATGCAAGAAGTGGCCACCGGAGTC
GATAAACAGGCTGTGAGCGTAAACGAGAGTGCAGGAATTGCGAAAAAAATGGCTGGTTCCATCAACGAAGCAGTCGAAAA
AACGGATGGTGTTCAACAAACAGCCCAAGAGGCAGCCCAGTTCGTAGAAAACGGCAACAAGGCGATTAACACAAGTATTT
CACAAATGACGCAGATTAGGGAAACAGTAGGAAACTTATCACAAAAAGTAGAGGGGCTCGGGCAACGTTCAATCGAAATT
AACAAAGTGGCCGATACGATCAAAAGCATTGCTGACCAAACGAATTTGCTTGCGCTCAATGCTGCTATCGAAGCTGCCCG
CGCTGGCGAAGATGGCCGCGGCTTTTCCGTCGTCGCCAACGAAGTTAAAAAACTGGCAGACCAGTCAGCCGCCGCTACGG
TTGAGATTAGTGAAATGATCCAATTAACACAAGTAGATGCCCAACAAACGGTCGCACAAATGGAAACAAGCAAAGAACAA
GTGGAAAAAGGGATTGAAGTTGTCAACGTTGCGGGCGAATCATTCCACAACATTAAAATTTTCGTCGATAACGTGGCCGC
GGAAGTCCATGAAGTCGCGAGCTTAATTAACAGCATCGGCCAAGGAAGCGAAACATTCGTCGCCACGTTTGACGATCTCG
CTTCCATCTCAGAGACGTCGTCCGCTAGCGTCCAAAACATTTCAGCCTTTACAGAAGAACAGCTTGCTTCAATGGAAGAA
ATCGCTGCTTCTGTAGAAAACTTAACCCAATTTGCCGAAGAGCTCCAAGGGTTAGTGCAACAGTTTGACATCGATGACAA
GCAGCAATAA

Upstream 100 bases:

>100_bases
GCAACTGCTGTAACCCTTTAAAAATTGGTAACGGATGACGATAATAACAGTGTTGAATTTTTAAACGTAAGGGGAAAACA
ATAGAAGGGGAGCAAAAAAC

Downstream 100 bases:

>100_bases
AAAAGCAGCCCAGCGATTTAACCATGTCGCTGGGCCATTTTTGGCAAAACAAGTCTATTTCAAATAGGGAATAGATCAGG
TAATATAGCTCTATACAAGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 669; Mature: 669

Protein sequence:

>669_residues
MKNKWTTLKHWPLKAKLITAFAIVLAIPSAIIGISSYQSAKGNIISSMSEANQESLQIINRTIDLFIEGQIENIEYVALA
SDAEAFLEEETEEQRTLLQTFQETKTHVEQTFVGTTAGNFMNEPTSFQNPPDYDPRERPWYQQAMEQTGETIITAPYISN
SSNEPVVTIAKTTADEHGVAALNLQLDAITDLLSTISIGENGYVFIIDQNNAYVSHPHEELGSEASEFFLQLHDSEEGEL
DYQSETDDENLNLHYTTNDRTGWKIVSAMYETEIERAVAPILNTTLFVIFLSLLGGAVLVYILTRSIVSPIQRLTTAAEK
MGEGDLAVTFKVDKNQNDEIGRLGKSFEKMRNALATMIAHIQDKSHQLSASAEEVMAISGENTRATEQIANSMQEVATGV
DKQAVSVNESAGIAKKMAGSINEAVEKTDGVQQTAQEAAQFVENGNKAINTSISQMTQIRETVGNLSQKVEGLGQRSIEI
NKVADTIKSIADQTNLLALNAAIEAARAGEDGRGFSVVANEVKKLADQSAAATVEISEMIQLTQVDAQQTVAQMETSKEQ
VEKGIEVVNVAGESFHNIKIFVDNVAAEVHEVASLINSIGQGSETFVATFDDLASISETSSASVQNISAFTEEQLASMEE
IAASVENLTQFAEELQGLVQQFDIDDKQQ

Sequences:

>Translated_669_residues
MKNKWTTLKHWPLKAKLITAFAIVLAIPSAIIGISSYQSAKGNIISSMSEANQESLQIINRTIDLFIEGQIENIEYVALA
SDAEAFLEEETEEQRTLLQTFQETKTHVEQTFVGTTAGNFMNEPTSFQNPPDYDPRERPWYQQAMEQTGETIITAPYISN
SSNEPVVTIAKTTADEHGVAALNLQLDAITDLLSTISIGENGYVFIIDQNNAYVSHPHEELGSEASEFFLQLHDSEEGEL
DYQSETDDENLNLHYTTNDRTGWKIVSAMYETEIERAVAPILNTTLFVIFLSLLGGAVLVYILTRSIVSPIQRLTTAAEK
MGEGDLAVTFKVDKNQNDEIGRLGKSFEKMRNALATMIAHIQDKSHQLSASAEEVMAISGENTRATEQIANSMQEVATGV
DKQAVSVNESAGIAKKMAGSINEAVEKTDGVQQTAQEAAQFVENGNKAINTSISQMTQIRETVGNLSQKVEGLGQRSIEI
NKVADTIKSIADQTNLLALNAAIEAARAGEDGRGFSVVANEVKKLADQSAAATVEISEMIQLTQVDAQQTVAQMETSKEQ
VEKGIEVVNVAGESFHNIKIFVDNVAAEVHEVASLINSIGQGSETFVATFDDLASISETSSASVQNISAFTEEQLASMEE
IAASVENLTQFAEELQGLVQQFDIDDKQQ
>Mature_669_residues
MKNKWTTLKHWPLKAKLITAFAIVLAIPSAIIGISSYQSAKGNIISSMSEANQESLQIINRTIDLFIEGQIENIEYVALA
SDAEAFLEEETEEQRTLLQTFQETKTHVEQTFVGTTAGNFMNEPTSFQNPPDYDPRERPWYQQAMEQTGETIITAPYISN
SSNEPVVTIAKTTADEHGVAALNLQLDAITDLLSTISIGENGYVFIIDQNNAYVSHPHEELGSEASEFFLQLHDSEEGEL
DYQSETDDENLNLHYTTNDRTGWKIVSAMYETEIERAVAPILNTTLFVIFLSLLGGAVLVYILTRSIVSPIQRLTTAAEK
MGEGDLAVTFKVDKNQNDEIGRLGKSFEKMRNALATMIAHIQDKSHQLSASAEEVMAISGENTRATEQIANSMQEVATGV
DKQAVSVNESAGIAKKMAGSINEAVEKTDGVQQTAQEAAQFVENGNKAINTSISQMTQIRETVGNLSQKVEGLGQRSIEI
NKVADTIKSIADQTNLLALNAAIEAARAGEDGRGFSVVANEVKKLADQSAAATVEISEMIQLTQVDAQQTVAQMETSKEQ
VEKGIEVVNVAGESFHNIKIFVDNVAAEVHEVASLINSIGQGSETFVATFDDLASISETSSASVQNISAFTEEQLASMEE
IAASVENLTQFAEELQGLVQQFDIDDKQQ

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=294, Percent_Identity=30.2721088435374, Blast_Score=118, Evalue=2e-27,
Organism=Escherichia coli, GI1787690, Length=364, Percent_Identity=27.1978021978022, Blast_Score=109, Evalue=7e-25,
Organism=Escherichia coli, GI2367378, Length=314, Percent_Identity=28.9808917197452, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788194, Length=386, Percent_Identity=25.9067357512953, Blast_Score=93, Evalue=6e-20,
Organism=Escherichia coli, GI1789453, Length=372, Percent_Identity=25.8064516129032, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72984; Mature: 72984

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKWTTLKHWPLKAKLITAFAIVLAIPSAIIGISSYQSAKGNIISSMSEANQESLQIIN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHH
RTIDLFIEGQIENIEYVALASDAEAFLEEETEEQRTLLQTFQETKTHVEQTFVGTTAGNF
HHHHHEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
MNEPTSFQNPPDYDPRERPWYQQAMEQTGETIITAPYISNSSNEPVVTIAKTTADEHGVA
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEE
ALNLQLDAITDLLSTISIGENGYVFIIDQNNAYVSHPHEELGSEASEFFLQLHDSEEGEL
EEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCHHHHCCHHHHHHHHHCCCCCCCC
DYQSETDDENLNLHYTTNDRTGWKIVSAMYETEIERAVAPILNTTLFVIFLSLLGGAVLV
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YILTRSIVSPIQRLTTAAEKMGEGDLAVTFKVDKNQNDEIGRLGKSFEKMRNALATMIAH
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
IQDKSHQLSASAEEVMAISGENTRATEQIANSMQEVATGVDKQAVSVNESAGIAKKMAGS
HHCCCHHHHCCHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH
INEAVEKTDGVQQTAQEAAQFVENGNKAINTSISQMTQIRETVGNLSQKVEGLGQRSIEI
HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEH
NKVADTIKSIADQTNLLALNAAIEAARAGEDGRGFSVVANEVKKLADQSAAATVEISEMI
HHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHEEEHHHHH
QLTQVDAQQTVAQMETSKEQVEKGIEVVNVAGESFHNIKIFVDNVAAEVHEVASLINSIG
HHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHC
QGSETFVATFDDLASISETSSASVQNISAFTEEQLASMEEIAASVENLTQFAEELQGLVQ
CCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFDIDDKQQ
HCCCCCCCC
>Mature Secondary Structure
MKNKWTTLKHWPLKAKLITAFAIVLAIPSAIIGISSYQSAKGNIISSMSEANQESLQIIN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHH
RTIDLFIEGQIENIEYVALASDAEAFLEEETEEQRTLLQTFQETKTHVEQTFVGTTAGNF
HHHHHEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
MNEPTSFQNPPDYDPRERPWYQQAMEQTGETIITAPYISNSSNEPVVTIAKTTADEHGVA
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEE
ALNLQLDAITDLLSTISIGENGYVFIIDQNNAYVSHPHEELGSEASEFFLQLHDSEEGEL
EEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCHHHHCCHHHHHHHHHCCCCCCCC
DYQSETDDENLNLHYTTNDRTGWKIVSAMYETEIERAVAPILNTTLFVIFLSLLGGAVLV
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YILTRSIVSPIQRLTTAAEKMGEGDLAVTFKVDKNQNDEIGRLGKSFEKMRNALATMIAH
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
IQDKSHQLSASAEEVMAISGENTRATEQIANSMQEVATGVDKQAVSVNESAGIAKKMAGS
HHCCCHHHHCCHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH
INEAVEKTDGVQQTAQEAAQFVENGNKAINTSISQMTQIRETVGNLSQKVEGLGQRSIEI
HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEH
NKVADTIKSIADQTNLLALNAAIEAARAGEDGRGFSVVANEVKKLADQSAAATVEISEMI
HHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHEEEHHHHH
QLTQVDAQQTVAQMETSKEQVEKGIEVVNVAGESFHNIKIFVDNVAAEVHEVASLINSIG
HHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHC
QGSETFVATFDDLASISETSSASVQNISAFTEEQLASMEEIAASVENLTQFAEELQGLVQ
CCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFDIDDKQQ
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA