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The map label for this gene is pucH [H]

Identifier: 56965498

GI number: 56965498

Start: 3896234

End: 3897466

Strand: Direct

Name: pucH [H]

Synonym: ABC3738

Alternate gene names: 56965498

Gene position: 3896234-3897466 (Clockwise)

Preceding gene: 56965489

Following gene: 56965499

Centisome position: 90.53

GC content: 51.58

Gene sequence:

>1233_bases
ATGATCAACAGCTTGGAAACAGAGCAAGCTAGTGCCTATATTCACTATCTTGCTCGCTTTGGCAAAACGAGCGACGGCGG
AAATACACGCCTTCTTTATACACCAACCTGGCTGGAAGCCCAACAGGCCGTTTTCTCTTTATTTCAAGCAAAGGGGCTCG
ATGCTTTCTTTGACGATGTCGGCAATGCTTATGGGCGGATCGAAGGAACGCTTGCTTCGCAAGCCTCAATCGTCACTGGC
TCCCATATTGACACGGTTTCCAGCGGCGGCAAATTTGATGGAGCTTATGGCATTATCGGCAGCTTGCTTGCTGTCTCACG
CCTTGTGTCCCGCTATGGCCGCCCTAAAAAAACGATTGATGTCGTCTCTCTTTGCGAGGAAGAAGGCAGCCGCTTCCCCC
TTGCTTTTTGGGGGTCCGGCAGTATTACAGGACGCTATGAGCAAGCGGACATAGATGGACTCCTTGACGCATCAGGCATT
AGTTTAGGCGAGGCAATGCGCGCAAACGGATTTGGCCAGGGCCATTATCAAGCGCCCCGCCGCACAGACATAGACTGTTT
CATTGAATTGCATATTGAACAAGGGCAAGTGTTGGAACATAGCGGCAACAAAATTGGCATTGCCAAGGCTATTGTCGGTC
AAAGGCGTTTCACGGTAACAGTGGAAGGCGCTGCCAACCATGCTGGCACAACGCCGATGCACATGCGCAAAGATGCGATG
GAACTAGCTTCGCGCTTAATTACCCGCTTAGTAGACAAAGCAAGGAAAATCGACGAGGCGTTTGTCGCCACCGTTGGGCA
AATTGAAGCCTTCCCAAATACAGCCAATGTCATCCCTGGCAAAGTGAGCTTTTCTCTTGATATCCGCCACCATTCCACGA
ACATGCTCGATCGCTACTGTGAGGAAATGGAGACGTTCTTCCATGAACAAGAGCAAGCGAGCCAGTTAGGCATCTCTGTG
GACCAGTGGGCAGACGTCGCTCCAGTAGCGATGGACGCAGACCTTACAGCACTGGCCTTCCAGTCTGCGCAAAAAACAGG
GCTTCCAGTCCAATACATGTACAGCGGCGCCGGGCATGATACGCAAATTTTCGGCAGTTGCTGCCCAACGGCACTGTTGT
TTGTCCCTAGCAAAGGCGGCATTAGCCACTCCCCATTGGAGTTTACAGCCGATGAAGATTTGGAAGCTGGCGTATCTGCA
CTTGCCGCCCTTTTGTATAAGCTTGCCTATTAG

Upstream 100 bases:

>100_bases
TGCCAATGATTTATCGTAAGCTTACCAGTAAAATCAGTCACACACAGAAGTATTCGGAACATTTCTGACATAAAAAATAA
AGCGAGGGGTACGATTTGCG

Downstream 100 bases:

>100_bases
TTTAAAGCTGCAAAATGTTTTTGAAGGAGAATTGCAATGGATACGTACCTTTCAGCAAAGCGGACGATTATGACGCCAGG
GCCGGTAGAAGTCGACCCCC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: Allantoate deiminase [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MINSLETEQASAYIHYLARFGKTSDGGNTRLLYTPTWLEAQQAVFSLFQAKGLDAFFDDVGNAYGRIEGTLASQASIVTG
SHIDTVSSGGKFDGAYGIIGSLLAVSRLVSRYGRPKKTIDVVSLCEEEGSRFPLAFWGSGSITGRYEQADIDGLLDASGI
SLGEAMRANGFGQGHYQAPRRTDIDCFIELHIEQGQVLEHSGNKIGIAKAIVGQRRFTVTVEGAANHAGTTPMHMRKDAM
ELASRLITRLVDKARKIDEAFVATVGQIEAFPNTANVIPGKVSFSLDIRHHSTNMLDRYCEEMETFFHEQEQASQLGISV
DQWADVAPVAMDADLTALAFQSAQKTGLPVQYMYSGAGHDTQIFGSCCPTALLFVPSKGGISHSPLEFTADEDLEAGVSA
LAALLYKLAY

Sequences:

>Translated_410_residues
MINSLETEQASAYIHYLARFGKTSDGGNTRLLYTPTWLEAQQAVFSLFQAKGLDAFFDDVGNAYGRIEGTLASQASIVTG
SHIDTVSSGGKFDGAYGIIGSLLAVSRLVSRYGRPKKTIDVVSLCEEEGSRFPLAFWGSGSITGRYEQADIDGLLDASGI
SLGEAMRANGFGQGHYQAPRRTDIDCFIELHIEQGQVLEHSGNKIGIAKAIVGQRRFTVTVEGAANHAGTTPMHMRKDAM
ELASRLITRLVDKARKIDEAFVATVGQIEAFPNTANVIPGKVSFSLDIRHHSTNMLDRYCEEMETFFHEQEQASQLGISV
DQWADVAPVAMDADLTALAFQSAQKTGLPVQYMYSGAGHDTQIFGSCCPTALLFVPSKGGISHSPLEFTADEDLEAGVSA
LAALLYKLAY
>Mature_410_residues
MINSLETEQASAYIHYLARFGKTSDGGNTRLLYTPTWLEAQQAVFSLFQAKGLDAFFDDVGNAYGRIEGTLASQASIVTG
SHIDTVSSGGKFDGAYGIIGSLLAVSRLVSRYGRPKKTIDVVSLCEEEGSRFPLAFWGSGSITGRYEQADIDGLLDASGI
SLGEAMRANGFGQGHYQAPRRTDIDCFIELHIEQGQVLEHSGNKIGIAKAIVGQRRFTVTVEGAANHAGTTPMHMRKDAM
ELASRLITRLVDKARKIDEAFVATVGQIEAFPNTANVIPGKVSFSLDIRHHSTNMLDRYCEEMETFFHEQEQASQLGISV
DQWADVAPVAMDADLTALAFQSAQKTGLPVQYMYSGAGHDTQIFGSCCPTALLFVPSKGGISHSPLEFTADEDLEAGVSA
LAALLYKLAY

Specific function: Involved in the anaerobic utilization of allantoin. Converts allantoate to (S)-ureidoglycolate and ammonia [H]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=397, Percent_Identity=45.088161209068, Blast_Score=369, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 44297; Mature: 44297

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSLETEQASAYIHYLARFGKTSDGGNTRLLYTPTWLEAQQAVFSLFQAKGLDAFFDDV
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHH
GNAYGRIEGTLASQASIVTGSHIDTVSSGGKFDGAYGIIGSLLAVSRLVSRYGRPKKTID
CCHHHCEEEEHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
VVSLCEEEGSRFPLAFWGSGSITGRYEQADIDGLLDASGISLGEAMRANGFGQGHYQAPR
HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
RTDIDCFIELHIEQGQVLEHSGNKIGIAKAIVGQRRFTVTVEGAANHAGTTPMHMRKDAM
CCCCEEEEEEEECCCCEECCCCCEEEHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH
ELASRLITRLVDKARKIDEAFVATVGQIEAFPNTANVIPGKVSFSLDIRHHSTNMLDRYC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHH
EEMETFFHEQEQASQLGISVDQWADVAPVAMDADLTALAFQSAQKTGLPVQYMYSGAGHD
HHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCHHHHHHHHHHHCCCCEEEEECCCCCC
TQIFGSCCPTALLFVPSKGGISHSPLEFTADEDLEAGVSALAALLYKLAY
HHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINSLETEQASAYIHYLARFGKTSDGGNTRLLYTPTWLEAQQAVFSLFQAKGLDAFFDDV
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHH
GNAYGRIEGTLASQASIVTGSHIDTVSSGGKFDGAYGIIGSLLAVSRLVSRYGRPKKTID
CCHHHCEEEEHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
VVSLCEEEGSRFPLAFWGSGSITGRYEQADIDGLLDASGISLGEAMRANGFGQGHYQAPR
HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
RTDIDCFIELHIEQGQVLEHSGNKIGIAKAIVGQRRFTVTVEGAANHAGTTPMHMRKDAM
CCCCEEEEEEEECCCCEECCCCCEEEHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH
ELASRLITRLVDKARKIDEAFVATVGQIEAFPNTANVIPGKVSFSLDIRHHSTNMLDRYC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHH
EEMETFFHEQEQASQLGISVDQWADVAPVAMDADLTALAFQSAQKTGLPVQYMYSGAGHD
HHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCHHHHHHHHHHHCCCCEEEEECCCCCC
TQIFGSCCPTALLFVPSKGGISHSPLEFTADEDLEAGVSALAALLYKLAY
HHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136 [H]