| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is ycbP [H]
Identifier: 56965489
GI number: 56965489
Start: 3886503
End: 3886877
Strand: Direct
Name: ycbP [H]
Synonym: ABC3729
Alternate gene names: 56965489
Gene position: 3886503-3886877 (Clockwise)
Preceding gene: 56965488
Following gene: 56965498
Centisome position: 90.3
GC content: 45.6
Gene sequence:
>375_bases ATGAAACATGTAAAAGCATTAGCCGTTAAAGGCACCATGACACTCGTGCTCCTTTACTTATTCCTAGGTTTTGGTTTTGG GCTGTCCTTTGGGAATGTCTTTATAATCACAGTCATTCTTGTGGGGATTGCCTATTTAGGCGACATTCTCATCTTGCCTA AAATCACGAACATAATGGCCACTGTCGCTGATTCGGTCATTGCCTTTTTCATTGTGTGGTGGCTAGGAATGGCACTTACC CCGATTGCACCGAAAACGATGGCAGGGGCTGCCGCCATTTCAGCCATTGCGATTGCCGTCGGCGAATACTTCTTCCATAT TTACTTGGCCAAATTAGGCATTGGTTCAGACCGATTGAGCACGTCCTCTTCATAA
Upstream 100 bases:
>100_bases AAAAGAAAAAGGCTGGTTAGTCCCTCCTCCTCTTCACCAACCACCAGCTGATGAGGACATGTAATAGAATAACTTTTAGG TATACGAAGGAGGAATCACC
Downstream 100 bases:
>100_bases AAGCACAAGCCCCCAAGGGAGTTGTCTATTTAGGCAACTCCTAAGGTTGTCGACAAAGTCGATAACCGCCCGCTCAGACT GATAGAAAACGCTTGTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF15 [H]
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKHVKALAVKGTMTLVLLYLFLGFGFGLSFGNVFIITVILVGIAYLGDILILPKITNIMATVADSVIAFFIVWWLGMALT PIAPKTMAGAAAISAIAIAVGEYFFHIYLAKLGIGSDRLSTSSS
Sequences:
>Translated_124_residues MKHVKALAVKGTMTLVLLYLFLGFGFGLSFGNVFIITVILVGIAYLGDILILPKITNIMATVADSVIAFFIVWWLGMALT PIAPKTMAGAAAISAIAIAVGEYFFHIYLAKLGIGSDRLSTSSS >Mature_124_residues MKHVKALAVKGTMTLVLLYLFLGFGFGLSFGNVFIITVILVGIAYLGDILILPKITNIMATVADSVIAFFIVWWLGMALT PIAPKTMAGAAAISAIAIAVGEYFFHIYLAKLGIGSDRLSTSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019649 [H]
Pfam domain/function: PF10710 DUF2512 [H]
EC number: NA
Molecular weight: Translated: 13157; Mature: 13157
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHVKALAVKGTMTLVLLYLFLGFGFGLSFGNVFIITVILVGIAYLGDILILPKITNIMA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVADSVIAFFIVWWLGMALTPIAPKTMAGAAAISAIAIAVGEYFFHIYLAKLGIGSDRLS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TSSS CCCC >Mature Secondary Structure MKHVKALAVKGTMTLVLLYLFLGFGFGLSFGNVFIITVILVGIAYLGDILILPKITNIMA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVADSVIAFFIVWWLGMALTPIAPKTMAGAAAISAIAIAVGEYFFHIYLAKLGIGSDRLS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TSSS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704254; 9384377 [H]