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The map label for this gene is sdpI [H]

Identifier: 56965474

GI number: 56965474

Start: 3868982

End: 3869620

Strand: Direct

Name: sdpI [H]

Synonym: ABC3712

Alternate gene names: 56965474

Gene position: 3868982-3869620 (Clockwise)

Preceding gene: 56965473

Following gene: 56965476

Centisome position: 89.9

GC content: 45.07

Gene sequence:

>639_bases
ATGAAAAAACATCTCTTTCCAATTGTTTCAATTATAATTTCTATCGCTGTATGGCTTTTTGCTTATAAACACTTGCCTGC
GGAAATGCCCGTACATTGGGGAGTGAATGGAGAAGTGGACCGCTATGCTCCAACATTCTCTGCCTTCTTGCTTCTTAATG
GAATCCTGATCGCCGTTTATGCGATGTTGCTATACTTGCCCCGCATAGACCCGAAGAAAGACAACTATAGAAAATTCACA
CGGCCCTATTCGATTATCGGCAACGTGCTCATCGCCCTTTTTCTCGCGATTAGCATTGTGACGGTCCTCTCAGGCATAGG
TGCTCCCGTTTCAATCAATCGGGTCGTGCCAGTTGCAGTAGGCATCCTCTTTATCATTCTTGGAAACTACATGCAGACGA
TTAAGCCCAACTGGTTTATCGGCATCAAAACGCCGTGGACCATCAGCAATGACGAAGTTTGGCGAAAAACACACCGTCTT
GGTGGGCGTTTGCTTATAGGCGGAGGCTTGCTTTTTATCATCGAACCGTTTTTGCCAAGAAACATTAGTGCGGTATTGTC
CATTGGACTCATTGTTGTAATCGTAGTCGTGCCGATGGTTTATTCGTATATTCTTCATAAACGCATCGTCGGCCATTAG

Upstream 100 bases:

>100_bases
AGAAAAAAGGCCAGTTCGTCTATTACTCGCTCAACTTAACCGTATTTCAGGAGCTGCTTTCCTGGACAATGGGCTTTTTT
GAAAAAGGGGGAAAACAACC

Downstream 100 bases:

>100_bases
GCACTTGAAAGCAGTAGCCGATCTACTGACTCATGATTTTCGTTATGCTGCTATAGGAAAGAATATCCTTTGTCAGATGG
GAAAACGTTTCGTCGTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKHLFPIVSIIISIAVWLFAYKHLPAEMPVHWGVNGEVDRYAPTFSAFLLLNGILIAVYAMLLYLPRIDPKKDNYRKFT
RPYSIIGNVLIALFLAISIVTVLSGIGAPVSINRVVPVAVGILFIILGNYMQTIKPNWFIGIKTPWTISNDEVWRKTHRL
GGRLLIGGGLLFIIEPFLPRNISAVLSIGLIVVIVVVPMVYSYILHKRIVGH

Sequences:

>Translated_212_residues
MKKHLFPIVSIIISIAVWLFAYKHLPAEMPVHWGVNGEVDRYAPTFSAFLLLNGILIAVYAMLLYLPRIDPKKDNYRKFT
RPYSIIGNVLIALFLAISIVTVLSGIGAPVSINRVVPVAVGILFIILGNYMQTIKPNWFIGIKTPWTISNDEVWRKTHRL
GGRLLIGGGLLFIIEPFLPRNISAVLSIGLIVVIVVVPMVYSYILHKRIVGH
>Mature_212_residues
MKKHLFPIVSIIISIAVWLFAYKHLPAEMPVHWGVNGEVDRYAPTFSAFLLLNGILIAVYAMLLYLPRIDPKKDNYRKFT
RPYSIIGNVLIALFLAISIVTVLSGIGAPVSINRVVPVAVGILFIILGNYMQTIKPNWFIGIKTPWTISNDEVWRKTHRL
GGRLLIGGGLLFIIEPFLPRNISAVLSIGLIVVIVVVPMVYSYILHKRIVGH

Specific function: Immunity protein that provides protection for the cell against the toxic effects of its own sdpC killing factor, and that functions as a receptor/signal transduction protein as well. Once sdpC accumulates in the extracellular milieu, sdpI binds to sdpC, c

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012867 [H]

Pfam domain/function: PF07853 DUF1648 [H]

EC number: NA

Molecular weight: Translated: 23752; Mature: 23752

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHLFPIVSIIISIAVWLFAYKHLPAEMPVHWGVNGEVDRYAPTFSAFLLLNGILIAVY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
AMLLYLPRIDPKKDNYRKFTRPYSIIGNVLIALFLAISIVTVLSGIGAPVSINRVVPVAV
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GILFIILGNYMQTIKPNWFIGIKTPWTISNDEVWRKTHRLGGRLLIGGGLLFIIEPFLPR
HHHHHHHHHHHHHHCCCEEEEECCCCEECCHHHHHHHHHCCCEEEECCCHHEEECCCCCC
NISAVLSIGLIVVIVVVPMVYSYILHKRIVGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKHLFPIVSIIISIAVWLFAYKHLPAEMPVHWGVNGEVDRYAPTFSAFLLLNGILIAVY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
AMLLYLPRIDPKKDNYRKFTRPYSIIGNVLIALFLAISIVTVLSGIGAPVSINRVVPVAV
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GILFIILGNYMQTIKPNWFIGIKTPWTISNDEVWRKTHRLGGRLLIGGGLLFIIEPFLPR
HHHHHHHHHHHHHHCCCEEEEECCCCEECCHHHHHHHHHCCCEEEECCCHHEEECCCCCC
NISAVLSIGLIVVIVVVPMVYSYILHKRIVGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]