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The map label for this gene is yndE [H]

Identifier: 56965254

GI number: 56965254

Start: 3626964

End: 3628052

Strand: Direct

Name: yndE [H]

Synonym: ABC3492

Alternate gene names: 56965254

Gene position: 3626964-3628052 (Clockwise)

Preceding gene: 56965253

Following gene: 56965255

Centisome position: 84.27

GC content: 39.94

Gene sequence:

>1089_bases
ATGGAAACCAACAAACGTTTAGGGAAAACACAGTTGTTTTGGTTTTATGTACAAGCACAAATTGGAATTGGCATTCTTTC
ATTGCCATACTCCCTTTACAAGGAAGCGCAAACAGATGGGTGGATTTCTTTGCTGATTTCGGCCATTCTAGTGCAAATCG
CCATTTTTGTCCTATGGCTGCTCCATAAACGCTTCCCCAATGACCATTTATTTTCAATTTGCGAAAAAATATTGGGCGTT
TTTGCTGGAAAAGTCCTCACTCTTATCTACATTGCTTATTTTATTTATACGGCAGCGCTTGTGTTGAAAAACTTCACGCA
ACTCATTGTTATTTGGATTTTAACAAAAACGCCTGAGCCTGTTTTTATGGCCTTGATTATCATTACATGTTTGCCACTTT
TATTAAGTACGCTTGATCAAAAAGCGCGGATGTTTGTCTTGACTGCTCCGCTCATTCTCCTTATCCCAATCGTCATGATT
GGTGGTTTTTTTCATAATGCCGATTTTTTAAATTTGCTGCCGATCGGCGTTACTGAACCGAAGGGGCTTATGAAAGGGAC
GTTGGCTGCTTCTTTCGCCATTAATGGCTATATTGTCATGAGCTTGATTTTTCCATACGTGAAAGCGACTGCCGCCGAGA
AAATAAAGGTTGTTTCACTAGCTCATTGGGTCGTTACATTTATTTATTTAATTGTTGTCGTTGCCTGTTACACGTCATTT
AGCGCTGGAGAACTGAAGCTGTTGCCGGAACCGTTTCTCTATTTAATCAAGTCGTTTTCATTTCCAATTGTAGAGCGGAT
CGATTTGATTTTTCTATGCCTTTGGTCGGTCATTGTGATTACGACTTATGGGATTTACGTTTATTGTGGGGTGATCGGTA
CGATGACATTGTTCCGCTCTCAGCGTTACCATTTGTATATTGTCCTAGCTTTCCTCATCACCTTTCTAGTGAATCTCATG
CCTGATAGCATGTATCAAGTCAGACAAATGATAACAAGAACAGACGAGTTTGGTACAATAATGAACGCTGCCATTCCTTT
GCTTATGCTTCTAATTGCTATCGTCTTTAAAAGGAGGTCGAAAGTGTGA

Upstream 100 bases:

>100_bases
AGATGGTTTGCTGCGGTTCCCAACTTGGTTGATCCAACAGCATACCCGTTATGCGTCTCCCCATTCAAAACGGGAGTCAC
GAAAGGGGGGATGATACGCA

Downstream 100 bases:

>100_bases
AAGCGATTCAAGCAGTCCTTATGCTAATCCTGTTAACGGGCTGTTGGGACCAGCGGCTCGTCAAAGATATTAATTTAATT
TATAGCCAAGCACTCGACCA

Product: spore germination protein KB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
METNKRLGKTQLFWFYVQAQIGIGILSLPYSLYKEAQTDGWISLLISAILVQIAIFVLWLLHKRFPNDHLFSICEKILGV
FAGKVLTLIYIAYFIYTAALVLKNFTQLIVIWILTKTPEPVFMALIIITCLPLLLSTLDQKARMFVLTAPLILLIPIVMI
GGFFHNADFLNLLPIGVTEPKGLMKGTLAASFAINGYIVMSLIFPYVKATAAEKIKVVSLAHWVVTFIYLIVVVACYTSF
SAGELKLLPEPFLYLIKSFSFPIVERIDLIFLCLWSVIVITTYGIYVYCGVIGTMTLFRSQRYHLYIVLAFLITFLVNLM
PDSMYQVRQMITRTDEFGTIMNAAIPLLMLLIAIVFKRRSKV

Sequences:

>Translated_362_residues
METNKRLGKTQLFWFYVQAQIGIGILSLPYSLYKEAQTDGWISLLISAILVQIAIFVLWLLHKRFPNDHLFSICEKILGV
FAGKVLTLIYIAYFIYTAALVLKNFTQLIVIWILTKTPEPVFMALIIITCLPLLLSTLDQKARMFVLTAPLILLIPIVMI
GGFFHNADFLNLLPIGVTEPKGLMKGTLAASFAINGYIVMSLIFPYVKATAAEKIKVVSLAHWVVTFIYLIVVVACYTSF
SAGELKLLPEPFLYLIKSFSFPIVERIDLIFLCLWSVIVITTYGIYVYCGVIGTMTLFRSQRYHLYIVLAFLITFLVNLM
PDSMYQVRQMITRTDEFGTIMNAAIPLLMLLIAIVFKRRSKV
>Mature_362_residues
METNKRLGKTQLFWFYVQAQIGIGILSLPYSLYKEAQTDGWISLLISAILVQIAIFVLWLLHKRFPNDHLFSICEKILGV
FAGKVLTLIYIAYFIYTAALVLKNFTQLIVIWILTKTPEPVFMALIIITCLPLLLSTLDQKARMFVLTAPLILLIPIVMI
GGFFHNADFLNLLPIGVTEPKGLMKGTLAASFAINGYIVMSLIFPYVKATAAEKIKVVSLAHWVVTFIYLIVVVACYTSF
SAGELKLLPEPFLYLIKSFSFPIVERIDLIFLCLWSVIVITTYGIYVYCGVIGTMTLFRSQRYHLYIVLAFLITFLVNLM
PDSMYQVRQMITRTDEFGTIMNAAIPLLMLLIAIVFKRRSKV

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41073; Mature: 41073

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNKRLGKTQLFWFYVQAQIGIGILSLPYSLYKEAQTDGWISLLISAILVQIAIFVLWL
CCCCCCCCCHHEEHEEEEHHHCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LHKRFPNDHLFSICEKILGVFAGKVLTLIYIAYFIYTAALVLKNFTQLIVIWILTKTPEP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VFMALIIITCLPLLLSTLDQKARMFVLTAPLILLIPIVMIGGFFHNADFLNLLPIGVTEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCC
KGLMKGTLAASFAINGYIVMSLIFPYVKATAAEKIKVVSLAHWVVTFIYLIVVVACYTSF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SAGELKLLPEPFLYLIKSFSFPIVERIDLIFLCLWSVIVITTYGIYVYCGVIGTMTLFRS
CCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QRYHLYIVLAFLITFLVNLMPDSMYQVRQMITRTDEFGTIMNAAIPLLMLLIAIVFKRRS
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KV
CC
>Mature Secondary Structure
METNKRLGKTQLFWFYVQAQIGIGILSLPYSLYKEAQTDGWISLLISAILVQIAIFVLWL
CCCCCCCCCHHEEHEEEEHHHCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LHKRFPNDHLFSICEKILGVFAGKVLTLIYIAYFIYTAALVLKNFTQLIVIWILTKTPEP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VFMALIIITCLPLLLSTLDQKARMFVLTAPLILLIPIVMIGGFFHNADFLNLLPIGVTEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCC
KGLMKGTLAASFAINGYIVMSLIFPYVKATAAEKIKVVSLAHWVVTFIYLIVVVACYTSF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SAGELKLLPEPFLYLIKSFSFPIVERIDLIFLCLWSVIVITTYGIYVYCGVIGTMTLFRS
CCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QRYHLYIVLAFLITFLVNLMPDSMYQVRQMITRTDEFGTIMNAAIPLLMLLIAIVFKRRS
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]