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The map label for this gene is yjbG [H]

Identifier: 56963785

GI number: 56963785

Start: 2135472

End: 2137265

Strand: Direct

Name: yjbG [H]

Synonym: ABC2020

Alternate gene names: 56963785

Gene position: 2135472-2137265 (Clockwise)

Preceding gene: 56963770

Following gene: 56963786

Centisome position: 49.62

GC content: 47.55

Gene sequence:

>1794_bases
ATGGATTTAACTAAACGTCAAGATGTGCCTGTAGAGGAAATGTGGGACTTAACGGCCCTGTTCCCTAATGATGAAGCATG
GCAAGCAGCGCTTGCCGAAGTAAAAGAACAAAGCGCCAAGCTTCCTGTTGGCGAAAAACTTGGGGAACGCCCTGAACATT
TGCTAAACGGTCTCCAAGCAAGAGAAGCGCTATTGGAAAAAGCGGTTCTGGTGATCACTTATGCTTCTCTTTCTTTAGCA
GGAAATGGAGCTGATGAGGCCGCTCAAGCCAATGCAAGCCGCGTTGAAGAAGCACAAGCGCTCATCCAAGCGAAATTAGC
AAAGCTAGAAGCGGATATTATTGCATTGCCGACTGGATTAATCGAGCAATTCCGTAAGTCCCTTCCTGAGCTTGAGCGGT
TTAGCGTCTATTTGGACAAACTGTTGGCGAATCAGCCTTATACCCTTTCTGCCGAAACAGAAGAAGCCCTTGCTTCTCTG
TCGCCTGTGTTGTCAGCGCCATACAGCACATATTCACAAAGCAAAGCTGCTGATATGTCGTTTCCTCCTTTTAAAGGGGC
AAACGGCCAGGATAAGCCCCTTTCATTCGCCCGTTTTGAAGACCAGTATGAGCTTTCGCCCAATACAGAAGAACGAAGAA
ATGCGTTTCACGTTTTCGACGAGACGTTGAAAGCATATGAACATACATACGCGAAATTGTTTGCAACCGAAGTGTCGAAG
AATGTCACAATCGCTTGCCTTAGAGGCTTTAAGTCAGCCGAAGCCATGCTTCTTCACGATCAGGACGTCAGCGAAACGAT
GTACCATAACCAGTTGGACACGATTTATGAGGAACTAGCTCCTCATATGCGCCGTTACGCCACGCTAAAAAAAGAGGTCC
TTGGCCTTTCTGAGCTTCGTTTTGAAGATTTAAAAGCGCCGCTCGACCCAGAGTTTGAACCAGAAACAACCTATGACAAC
GCATTTGCAACCATCATTGACGCACTTCGCGTATTTGGCGACGACTATGTTGACATGTTGCAAAGGGCAAAGACAGACCG
TTGGGTTGACCGGGCTGACAATATCGGCAAAGCGACAGGCGCTTTTTGTTCAAGCCCATATGGGGCACACCCTTACATTT
TGCTGACTTGGAAAAATACGATGCGCGGTGGTTTTATTCTTGCACATGAACTAGGGCATGCAGGGCATTTTTATCTTGCC
AATGCCCATCAGCCTCTCAGTGCAACTCGCCCATCGATGTATTGCATTGAAGCGCCGTCCACAATCAACGAATTGTTTTT
AGGGAACCACTTGCTTAAGCAGACAGACGATCCTCGGATGAAACGCTGGGTGCTGTTGCAATTTATTGGGACGTATTATC
ATAACTTTGTCACGCACCTGCTTGAAGGAGTTTTCCAACACCGTGTCTATCGTTATGCTGAAGAAGGCGTGCCACTGACC
GCTGTTTTGCTTCGTCAGACGAAGCAAGAGGTTATCTCCGGTTTCTGGGGCGATGCCGTTCACATTGACGAGCGCGCCGG
ACGGACGTGGATGAGGCAGCCTCATTACTACAAAGGCCTTTATCCGTATACGTATTCTGCTGGTTTAACAGCAGCCACCA
AAGCGTACTCCCTTTATGAACAAAACGGCCAAGTAGTCATTGACCGCTGGCTAGACATGCTCAAAGCTGGCGGCACCAAA
AAACCACTGGATTTATTTAAAATCGCCGGAGTCGACATGGAAAACAAAGAAACCATTCGAGCTGCAGTTGCCTATGTCGG
ACGTCTCATCGAAAAACTTGAGCAAAGTTATTAA

Upstream 100 bases:

>100_bases
CGTAACCATTCATAAAAAAATTCTGAAAGATGGCTGGCAAAGGCCGGGCATTCATGTATAATGGAAATATATTTCGATTA
ACGAAACATAGGAGGCTATT

Downstream 100 bases:

>100_bases
ACATCAGTTACGCTGTTAGCCGAGTCGAACGTAAGGTTTGGCTACAGTTTAAAAACCCGCCTGCTATGGAGGCGGGTTTT
TTCATGCATAAGCACAGCTA

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MDLTKRQDVPVEEMWDLTALFPNDEAWQAALAEVKEQSAKLPVGEKLGERPEHLLNGLQAREALLEKAVLVITYASLSLA
GNGADEAAQANASRVEEAQALIQAKLAKLEADIIALPTGLIEQFRKSLPELERFSVYLDKLLANQPYTLSAETEEALASL
SPVLSAPYSTYSQSKAADMSFPPFKGANGQDKPLSFARFEDQYELSPNTEERRNAFHVFDETLKAYEHTYAKLFATEVSK
NVTIACLRGFKSAEAMLLHDQDVSETMYHNQLDTIYEELAPHMRRYATLKKEVLGLSELRFEDLKAPLDPEFEPETTYDN
AFATIIDALRVFGDDYVDMLQRAKTDRWVDRADNIGKATGAFCSSPYGAHPYILLTWKNTMRGGFILAHELGHAGHFYLA
NAHQPLSATRPSMYCIEAPSTINELFLGNHLLKQTDDPRMKRWVLLQFIGTYYHNFVTHLLEGVFQHRVYRYAEEGVPLT
AVLLRQTKQEVISGFWGDAVHIDERAGRTWMRQPHYYKGLYPYTYSAGLTAATKAYSLYEQNGQVVIDRWLDMLKAGGTK
KPLDLFKIAGVDMENKETIRAAVAYVGRLIEKLEQSY

Sequences:

>Translated_597_residues
MDLTKRQDVPVEEMWDLTALFPNDEAWQAALAEVKEQSAKLPVGEKLGERPEHLLNGLQAREALLEKAVLVITYASLSLA
GNGADEAAQANASRVEEAQALIQAKLAKLEADIIALPTGLIEQFRKSLPELERFSVYLDKLLANQPYTLSAETEEALASL
SPVLSAPYSTYSQSKAADMSFPPFKGANGQDKPLSFARFEDQYELSPNTEERRNAFHVFDETLKAYEHTYAKLFATEVSK
NVTIACLRGFKSAEAMLLHDQDVSETMYHNQLDTIYEELAPHMRRYATLKKEVLGLSELRFEDLKAPLDPEFEPETTYDN
AFATIIDALRVFGDDYVDMLQRAKTDRWVDRADNIGKATGAFCSSPYGAHPYILLTWKNTMRGGFILAHELGHAGHFYLA
NAHQPLSATRPSMYCIEAPSTINELFLGNHLLKQTDDPRMKRWVLLQFIGTYYHNFVTHLLEGVFQHRVYRYAEEGVPLT
AVLLRQTKQEVISGFWGDAVHIDERAGRTWMRQPHYYKGLYPYTYSAGLTAATKAYSLYEQNGQVVIDRWLDMLKAGGTK
KPLDLFKIAGVDMENKETIRAAVAYVGRLIEKLEQSY
>Mature_597_residues
MDLTKRQDVPVEEMWDLTALFPNDEAWQAALAEVKEQSAKLPVGEKLGERPEHLLNGLQAREALLEKAVLVITYASLSLA
GNGADEAAQANASRVEEAQALIQAKLAKLEADIIALPTGLIEQFRKSLPELERFSVYLDKLLANQPYTLSAETEEALASL
SPVLSAPYSTYSQSKAADMSFPPFKGANGQDKPLSFARFEDQYELSPNTEERRNAFHVFDETLKAYEHTYAKLFATEVSK
NVTIACLRGFKSAEAMLLHDQDVSETMYHNQLDTIYEELAPHMRRYATLKKEVLGLSELRFEDLKAPLDPEFEPETTYDN
AFATIIDALRVFGDDYVDMLQRAKTDRWVDRADNIGKATGAFCSSPYGAHPYILLTWKNTMRGGFILAHELGHAGHFYLA
NAHQPLSATRPSMYCIEAPSTINELFLGNHLLKQTDDPRMKRWVLLQFIGTYYHNFVTHLLEGVFQHRVYRYAEEGVPLT
AVLLRQTKQEVISGFWGDAVHIDERAGRTWMRQPHYYKGLYPYTYSAGLTAATKAYSLYEQNGQVVIDRWLDMLKAGGTK
KPLDLFKIAGVDMENKETIRAAVAYVGRLIEKLEQSY

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 67437; Mature: 67437

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTKRQDVPVEEMWDLTALFPNDEAWQAALAEVKEQSAKLPVGEKLGERPEHLLNGLQA
CCCCCCCCCCHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHH
REALLEKAVLVITYASLSLAGNGADEAAQANASRVEEAQALIQAKLAKLEADIIALPTGL
HHHHHHHHHHHEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IEQFRKSLPELERFSVYLDKLLANQPYTLSAETEEALASLSPVLSAPYSTYSQSKAADMS
HHHHHHHCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
FPPFKGANGQDKPLSFARFEDQYELSPNTEERRNAFHVFDETLKAYEHTYAKLFATEVSK
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NVTIACLRGFKSAEAMLLHDQDVSETMYHNQLDTIYEELAPHMRRYATLKKEVLGLSELR
CCEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEDLKAPLDPEFEPETTYDNAFATIIDALRVFGDDYVDMLQRAKTDRWVDRADNIGKATG
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHH
AFCSSPYGAHPYILLTWKNTMRGGFILAHELGHAGHFYLANAHQPLSATRPSMYCIEAPS
HHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCC
TINELFLGNHLLKQTDDPRMKRWVLLQFIGTYYHNFVTHLLEGVFQHRVYRYAEEGVPLT
HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AVLLRQTKQEVISGFWGDAVHIDERAGRTWMRQPHYYKGLYPYTYSAGLTAATKAYSLYE
HHHHHHHHHHHHHCCCCCCEEECHHCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHH
QNGQVVIDRWLDMLKAGGTKKPLDLFKIAGVDMENKETIRAAVAYVGRLIEKLEQSY
CCCCEEHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLTKRQDVPVEEMWDLTALFPNDEAWQAALAEVKEQSAKLPVGEKLGERPEHLLNGLQA
CCCCCCCCCCHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHH
REALLEKAVLVITYASLSLAGNGADEAAQANASRVEEAQALIQAKLAKLEADIIALPTGL
HHHHHHHHHHHEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IEQFRKSLPELERFSVYLDKLLANQPYTLSAETEEALASLSPVLSAPYSTYSQSKAADMS
HHHHHHHCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
FPPFKGANGQDKPLSFARFEDQYELSPNTEERRNAFHVFDETLKAYEHTYAKLFATEVSK
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NVTIACLRGFKSAEAMLLHDQDVSETMYHNQLDTIYEELAPHMRRYATLKKEVLGLSELR
CCEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEDLKAPLDPEFEPETTYDNAFATIIDALRVFGDDYVDMLQRAKTDRWVDRADNIGKATG
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHH
AFCSSPYGAHPYILLTWKNTMRGGFILAHELGHAGHFYLANAHQPLSATRPSMYCIEAPS
HHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCC
TINELFLGNHLLKQTDDPRMKRWVLLQFIGTYYHNFVTHLLEGVFQHRVYRYAEEGVPLT
HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AVLLRQTKQEVISGFWGDAVHIDERAGRTWMRQPHYYKGLYPYTYSAGLTAATKAYSLYE
HHHHHHHHHHHHHCCCCCCEEECHHCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHH
QNGQVVIDRWLDMLKAGGTKKPLDLFKIAGVDMENKETIRAAVAYVGRLIEKLEQSY
CCCCEEHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]