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The map label for this gene is gerAA [H]

Identifier: 56963786

GI number: 56963786

Start: 2137405

End: 2138838

Strand: Direct

Name: gerAA [H]

Synonym: ABC2021

Alternate gene names: 56963786

Gene position: 2137405-2138838 (Clockwise)

Preceding gene: 56963785

Following gene: 56963787

Centisome position: 49.66

GC content: 43.38

Gene sequence:

>1434_bases
GTGGCAACAGATTATATAGGCATTTCATATGACGATATCAAAAGCAACATCCAGGCCGCCTTTCAAGAACAAGGCGATTT
TGTTAGCAAAGAGATTACCATTCCTGATTATGGGCGGAAATGTTGCTTATTCTTTCTCGGATCACAAATAAGTTGGAAAG
TCATTGCCGAAGTTGGCTTAAATATTGAGAAACTGAGTGGTTCCGAACGTTTCGACGCCGCTTTCTGTTCTTTGCTTGCG
CCGACATTAAGCAAAACGACTCTATTTCAAGATGAAATGGTGATGGCCATTTTTGAAGGCAATACAGTTGTGATCGCCGA
ACACTTATCAATTGCCTTTATTCTCCGTACACATGCGCCTAAAAAAAGAAGTTTTGCTGAGTCGACAACTGAAAAAGTCG
TCCGTGGGCCAAAGCTCGCTTACATAGAAGACTTAGACGATAACATCGGCCTAACAAGGCAAATGGTGAACAGCAAAAAT
TTAAAAGTAGAAGAGCACCAAATTAAAGAAAATGAGAGCATTAAAACATTGTCGCTCCTTTATATCAAAGGGGTCGCCGA
TGAAGGGATTATCGCTGATATTACCGATCGCCTCCATAAAATTAAAACAACCGAAATTCAAGATTCAGGCATGATTGAAG
AGTTGATCGAAGATGCGCCTTTTTCCCCTTTTCCCCAAATGCAAAGCACAGAGCGTCCTGACCGTGTTACCGCAGCCTTA
AATGATGGCCGCCTTGTTCTTTTTGTCGCTAATTCGCCGTTTGCCTTGATTTTGCCGACTACGTTCGATATGTTGTTGCA
GTCTCCAGATGACTATTATGAACGTTGGATTGCGAGCAGTTTTCTCCGCCTCCTTCGTTATATGTCCTTGTTTATAACCG
TGTTCCTATCATCGCTGTACATTTCATTTGTTTCGTTTCACCATGGGCTTTTGCCAACAGACGTAGCCATGACGATCATC
GCCACCAGGGAAGACATTCCTTTCCCGCCTATTTTGGAAGTGTTGATTATGGAAGTGACAATTGAATTGCTGCGTGAAGC
GGGCATCCGCTTGCCTTCACCACTCGGGCAAACGATTGGCCTAGTCGGTGGCGTTATCATCGGCCAAGCGGCAGTAGAGG
CCAATATCGTCAGTTCGCTCATGGTCATTATCGTCTCAATTACTACAATTACATCGTTTACCGTACCGAGCTACAGCTTT
GGCCTATCGTTTCGGCTCCTTCGTTTTGGGGCGATTATCATTTCAGCGATTTTAGGGCTCGTTGGCGTGATGTTCTTCTT
TTTGTTCGTGTTAATCCATTTGTCAAAACTGACAAGCTTTAACCAGCCTTACTTGTCAGGCAAGTTCTTTTTTTACAACC
AAAAATGGAAGCAAATTTTCCTGTTGTTATCAAAAAAGAGGGCGCTTAAAAAGCCAAAAGGGAGCGGAGCTTAG

Upstream 100 bases:

>100_bases
GGCTACAGTTTAAAAACCCGCCTGCTATGGAGGCGGGTTTTTTCATGCATAAGCACAGCTAATTATTGCACACTAACAGT
AAAAGAAGGAGGCTCTGGTT

Downstream 100 bases:

>100_bases
CCATGATTCCCAAACAGACGCTATCTACTGTACAGTTAACCGTCTTAACTGCAATCACATTACTCGGCGTGCAATTTTTG
ATTCTGCCACGCGTGCTAAC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MATDYIGISYDDIKSNIQAAFQEQGDFVSKEITIPDYGRKCCLFFLGSQISWKVIAEVGLNIEKLSGSERFDAAFCSLLA
PTLSKTTLFQDEMVMAIFEGNTVVIAEHLSIAFILRTHAPKKRSFAESTTEKVVRGPKLAYIEDLDDNIGLTRQMVNSKN
LKVEEHQIKENESIKTLSLLYIKGVADEGIIADITDRLHKIKTTEIQDSGMIEELIEDAPFSPFPQMQSTERPDRVTAAL
NDGRLVLFVANSPFALILPTTFDMLLQSPDDYYERWIASSFLRLLRYMSLFITVFLSSLYISFVSFHHGLLPTDVAMTII
ATREDIPFPPILEVLIMEVTIELLREAGIRLPSPLGQTIGLVGGVIIGQAAVEANIVSSLMVIIVSITTITSFTVPSYSF
GLSFRLLRFGAIIISAILGLVGVMFFFLFVLIHLSKLTSFNQPYLSGKFFFYNQKWKQIFLLLSKKRALKKPKGSGA

Sequences:

>Translated_477_residues
MATDYIGISYDDIKSNIQAAFQEQGDFVSKEITIPDYGRKCCLFFLGSQISWKVIAEVGLNIEKLSGSERFDAAFCSLLA
PTLSKTTLFQDEMVMAIFEGNTVVIAEHLSIAFILRTHAPKKRSFAESTTEKVVRGPKLAYIEDLDDNIGLTRQMVNSKN
LKVEEHQIKENESIKTLSLLYIKGVADEGIIADITDRLHKIKTTEIQDSGMIEELIEDAPFSPFPQMQSTERPDRVTAAL
NDGRLVLFVANSPFALILPTTFDMLLQSPDDYYERWIASSFLRLLRYMSLFITVFLSSLYISFVSFHHGLLPTDVAMTII
ATREDIPFPPILEVLIMEVTIELLREAGIRLPSPLGQTIGLVGGVIIGQAAVEANIVSSLMVIIVSITTITSFTVPSYSF
GLSFRLLRFGAIIISAILGLVGVMFFFLFVLIHLSKLTSFNQPYLSGKFFFYNQKWKQIFLLLSKKRALKKPKGSGA
>Mature_476_residues
ATDYIGISYDDIKSNIQAAFQEQGDFVSKEITIPDYGRKCCLFFLGSQISWKVIAEVGLNIEKLSGSERFDAAFCSLLAP
TLSKTTLFQDEMVMAIFEGNTVVIAEHLSIAFILRTHAPKKRSFAESTTEKVVRGPKLAYIEDLDDNIGLTRQMVNSKNL
KVEEHQIKENESIKTLSLLYIKGVADEGIIADITDRLHKIKTTEIQDSGMIEELIEDAPFSPFPQMQSTERPDRVTAALN
DGRLVLFVANSPFALILPTTFDMLLQSPDDYYERWIASSFLRLLRYMSLFITVFLSSLYISFVSFHHGLLPTDVAMTIIA
TREDIPFPPILEVLIMEVTIELLREAGIRLPSPLGQTIGLVGGVIIGQAAVEANIVSSLMVIIVSITTITSFTVPSYSFG
LSFRLLRFGAIIISAILGLVGVMFFFLFVLIHLSKLTSFNQPYLSGKFFFYNQKWKQIFLLLSKKRALKKPKGSGA

Specific function: Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimulate germination in the absence of gerD and gerK gene products (fructose and glucose re

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 53308; Mature: 53177

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDYIGISYDDIKSNIQAAFQEQGDFVSKEITIPDYGRKCCLFFLGSQISWKVIAEVGL
CCCCEECCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHCCCCCHHHHHHHCC
NIEKLSGSERFDAAFCSLLAPTLSKTTLFQDEMVMAIFEGNTVVIAEHLSIAFILRTHAP
CCEECCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCEEEEEECCEEEEEEECCCC
KKRSFAESTTEKVVRGPKLAYIEDLDDNIGLTRQMVNSKNLKVEEHQIKENESIKTLSLL
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCEEHHHHHCCCCCCEEEEEE
YIKGVADEGIIADITDRLHKIKTTEIQDSGMIEELIEDAPFSPFPQMQSTERPDRVTAAL
EEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
NDGRLVLFVANSPFALILPTTFDMLLQSPDDYYERWIASSFLRLLRYMSLFITVFLSSLY
CCCEEEEEEECCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISFVSFHHGLLPTDVAMTIIATREDIPFPPILEVLIMEVTIELLREAGIRLPSPLGQTIG
HHHHHHHCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LVGGVIIGQAAVEANIVSSLMVIIVSITTITSFTVPSYSFGLSFRLLRFGAIIISAILGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VGVMFFFLFVLIHLSKLTSFNQPYLSGKFFFYNQKWKQIFLLLSKKRALKKPKGSGA
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ATDYIGISYDDIKSNIQAAFQEQGDFVSKEITIPDYGRKCCLFFLGSQISWKVIAEVGL
CCCEECCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHCCCCCHHHHHHHCC
NIEKLSGSERFDAAFCSLLAPTLSKTTLFQDEMVMAIFEGNTVVIAEHLSIAFILRTHAP
CCEECCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCEEEEEECCEEEEEEECCCC
KKRSFAESTTEKVVRGPKLAYIEDLDDNIGLTRQMVNSKNLKVEEHQIKENESIKTLSLL
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCEEHHHHHCCCCCCEEEEEE
YIKGVADEGIIADITDRLHKIKTTEIQDSGMIEELIEDAPFSPFPQMQSTERPDRVTAAL
EEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
NDGRLVLFVANSPFALILPTTFDMLLQSPDDYYERWIASSFLRLLRYMSLFITVFLSSLY
CCCEEEEEEECCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISFVSFHHGLLPTDVAMTIIATREDIPFPPILEVLIMEVTIELLREAGIRLPSPLGQTIG
HHHHHHHCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LVGGVIIGQAAVEANIVSSLMVIIVSITTITSFTVPSYSFGLSFRLLRFGAIIISAILGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VGVMFFFLFVLIHLSKLTSFNQPYLSGKFFFYNQKWKQIFLLLSKKRALKKPKGSGA
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2998952; 9639930; 9384377; 3110007; 3923430 [H]