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The map label for this gene is gerAB [H]

Identifier: 56963769

GI number: 56963769

Start: 2118017

End: 2119132

Strand: Direct

Name: gerAB [H]

Synonym: ABC2004

Alternate gene names: 56963769

Gene position: 2118017-2119132 (Clockwise)

Preceding gene: 56963768

Following gene: 56963770

Centisome position: 49.21

GC content: 43.82

Gene sequence:

>1116_bases
ATGATGCCAGCTACACACACTCAAGCCCCAAGTGAAAGTCGGCTACTCTCGCCATTTTTCAGCTTTTTTATCGTTGTCGG
CGCCCAAATCAGCGTTGGCGTCCTTGGTTTTGAGCGAATTATCGTTACGTTTTCAGGCCAGGACGCTTGGTTATCTGTGG
TGCTGGCAGGAATGACAGTCCATGTACTCGTGTGGCTTCTATACGGCATATTGAAGCGAGGGCAAGGAGACCTTGTCGCG
ATCCACAAAGCCGTGTTTGGAAAAGCAGTTGGTGGTTTGCTGAACCTTTATTTTATCGGCTATTTTGCCTTGCTTGCTTA
CACGGTCATTCGTACGTATATCGAGATTATTCAAATGTGGATGTTTGTCGAAGTGTATGTATGGGTATTGTTTTTGCTGC
TCGTGTGTCTTGCCTATTCTTATGTAACAAATGGGTTGCGTGTCGTTGTCGGCCTTTGTGTGATTGGCCTCTTTGTTTCA
GCCCCATTGCTTTTGGCAAATTATTTTGCATTTACACATGCGAATGTTAGCAATCTGTTCCCTATGTTCGAACATTCACT
GCAAGCCATTCTCCTCGGCAGCAAAGCAATGACGCTTAATATGCTCGGCTTCGAGGTTTTATTGGTTGCCTATCCCTTTT
TAAAAAACGGTCCTACATCGCAAAAATGGAGCCATTTAGCGGTCTTTACAACCACACTCATCTACACGCTTGCAATTGTG
TTAACGACTATCTATTTTAATCAGAATCAACTTAATCAAACGATTTGGGCCACGATTACATTATGGAAAGTCGTCAATTT
GTCCGTCATCGAACGGTTCGAGTACATTGGTCTTTCGATTTGGCTATTTGTTGTGTTGCCTACCATTTGCTTGCTGCTTT
GGGCAGCAAGCCGCATTGCAAACCAAGCCTTCTCCATCAAACAACGCACCGGATTGCGCCTGTTAATTGTCTTGCTGTTT
GTTTGCTCCTTTTTCGTCGTAGGGCGTAAGGAAGTCAATCAATTGAATGATATGACAGCCGCAATTGGCTTTTGGACCAT
TATTACTTACGTCCCATTCTTATACATTGCCCAAAAAGTAAAGCTTGCTGTTATTAAAGGAGGGAACAAACGATGA

Upstream 100 bases:

>100_bases
GTAAGCGTACGAGCTAAGAAACGCAAGCGCTTTAGCTCCAGCCACGATGGCAACCATTTAAAAAAGCGCGACATTGAGGA
GTAAAAAAAGGAGTGGACCA

Downstream 100 bases:

>100_bases
AAAAATGGCTGCTTGCCCTTTGCTGCGTTTTAGTGCTAGGAGGATGCGCGCCTCGTACAAAAGTGATTGAAGACATTCAG
CTCATTCAAGCAATTGGCTA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MMPATHTQAPSESRLLSPFFSFFIVVGAQISVGVLGFERIIVTFSGQDAWLSVVLAGMTVHVLVWLLYGILKRGQGDLVA
IHKAVFGKAVGGLLNLYFIGYFALLAYTVIRTYIEIIQMWMFVEVYVWVLFLLLVCLAYSYVTNGLRVVVGLCVIGLFVS
APLLLANYFAFTHANVSNLFPMFEHSLQAILLGSKAMTLNMLGFEVLLVAYPFLKNGPTSQKWSHLAVFTTTLIYTLAIV
LTTIYFNQNQLNQTIWATITLWKVVNLSVIERFEYIGLSIWLFVVLPTICLLLWAASRIANQAFSIKQRTGLRLLIVLLF
VCSFFVVGRKEVNQLNDMTAAIGFWTIITYVPFLYIAQKVKLAVIKGGNKR

Sequences:

>Translated_371_residues
MMPATHTQAPSESRLLSPFFSFFIVVGAQISVGVLGFERIIVTFSGQDAWLSVVLAGMTVHVLVWLLYGILKRGQGDLVA
IHKAVFGKAVGGLLNLYFIGYFALLAYTVIRTYIEIIQMWMFVEVYVWVLFLLLVCLAYSYVTNGLRVVVGLCVIGLFVS
APLLLANYFAFTHANVSNLFPMFEHSLQAILLGSKAMTLNMLGFEVLLVAYPFLKNGPTSQKWSHLAVFTTTLIYTLAIV
LTTIYFNQNQLNQTIWATITLWKVVNLSVIERFEYIGLSIWLFVVLPTICLLLWAASRIANQAFSIKQRTGLRLLIVLLF
VCSFFVVGRKEVNQLNDMTAAIGFWTIITYVPFLYIAQKVKLAVIKGGNKR
>Mature_371_residues
MMPATHTQAPSESRLLSPFFSFFIVVGAQISVGVLGFERIIVTFSGQDAWLSVVLAGMTVHVLVWLLYGILKRGQGDLVA
IHKAVFGKAVGGLLNLYFIGYFALLAYTVIRTYIEIIQMWMFVEVYVWVLFLLLVCLAYSYVTNGLRVVVGLCVIGLFVS
APLLLANYFAFTHANVSNLFPMFEHSLQAILLGSKAMTLNMLGFEVLLVAYPFLKNGPTSQKWSHLAVFTTTLIYTLAIV
LTTIYFNQNQLNQTIWATITLWKVVNLSVIERFEYIGLSIWLFVVLPTICLLLWAASRIANQAFSIKQRTGLRLLIVLLF
VCSFFVVGRKEVNQLNDMTAAIGFWTIITYVPFLYIAQKVKLAVIKGGNKR

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter. Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41642; Mature: 41642

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HEEEECCCCCC
>Mature Secondary Structure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HEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3110007; 9639930; 9384377; 8382989 [H]