Click here to switch to the map view.

The map label for this gene is spoIISA [H]

Identifier: 56963707

GI number: 56963707

Start: 2056933

End: 2057685

Strand: Direct

Name: spoIISA [H]

Synonym: ABC1942

Alternate gene names: 56963707

Gene position: 2056933-2057685 (Clockwise)

Preceding gene: 56963706

Following gene: 56963708

Centisome position: 47.79

GC content: 43.96

Gene sequence:

>753_bases
ATGCTTCTGCTGTACCAATTGCTTGTGTGGTTGACCGTATTAGGGCTGGGGCTATATGTATTTGCGTCTTGGCGGTGGGA
AGAGGAGACGAAAAAACGGCTCCCGATCATACGAAGATTATGGTATGCATGGTTTGTCACTGGAGCAGCATTTACATGGA
CGTTTTACCCGGAAAGTATTTTTACTGAATGGAATCACTATCTGATTGTTGCTTTGCTTTTCGTTGTTGTCGATGCCTTT
GTGTTTTTGAGCGCGTACGTGCAACGAATTGGTTCCAATGTGTTTACAATCGATACCGGCCAACTGATTGAAGCAAACGA
CCAAGTGCTCAAAGCGCAGCAAGACAGGCTAAAAGCTTTTTTTCGTTTACTAAAAAGTGACTCGATTAACGTCTATTACG
GAGGGCAGCGTGCATATATTACCGGTGTGAGAGAAATTCTAGCAAGGTTGGCCGACAAGACGGAAATCCAAGCAAGTGTC
TTTCCTTTCATGACACAAGGCGATAAAGACCATTTGCTTGTGCATTTCAAAGACCGCACGACGGTAAGAGCGACATTGGA
AAGACAGGATGTTTACTACGGAGAAAAAGATAAACTTGTTTTCATTCCTGTGATTTTACAAGGGGAGAGCCATGTCATTA
AACTGTCTTCTGAAGAGCGGCTTACCGAATTCGATGCACTCTTGTTTGCCTCACTTGTGGCCATTTATGATCTTCTGTCT
CAAGGCGGGGATGAAGAGCAGTATGAAGAATGA

Upstream 100 bases:

>100_bases
CAAGCTTTTTTTGTATGCAAATCCATGTTGGGAAATATTTCTATTTGTCCAGTTGCTGTCATAGACTTTATAACAGCATG
CAAAAATAGGGGGTGAGCAC

Downstream 100 bases:

>100_bases
AAAATAGGCATAGCCATTCTCACCGATGAAAGCATGCAGGAATAGTCTATCTTATAATGAGTTGAGTGGGTGAAGGGTTG
ATGAAGAAGACGACAAAGAA

Product: stage II sporulation protein SA

Products: NA

Alternate protein names: Killer protein spoIISA [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLLLYQLLVWLTVLGLGLYVFASWRWEEETKKRLPIIRRLWYAWFVTGAAFTWTFYPESIFTEWNHYLIVALLFVVVDAF
VFLSAYVQRIGSNVFTIDTGQLIEANDQVLKAQQDRLKAFFRLLKSDSINVYYGGQRAYITGVREILARLADKTEIQASV
FPFMTQGDKDHLLVHFKDRTTVRATLERQDVYYGEKDKLVFIPVILQGESHVIKLSSEERLTEFDALLFASLVAIYDLLS
QGGDEEQYEE

Sequences:

>Translated_250_residues
MLLLYQLLVWLTVLGLGLYVFASWRWEEETKKRLPIIRRLWYAWFVTGAAFTWTFYPESIFTEWNHYLIVALLFVVVDAF
VFLSAYVQRIGSNVFTIDTGQLIEANDQVLKAQQDRLKAFFRLLKSDSINVYYGGQRAYITGVREILARLADKTEIQASV
FPFMTQGDKDHLLVHFKDRTTVRATLERQDVYYGEKDKLVFIPVILQGESHVIKLSSEERLTEFDALLFASLVAIYDLLS
QGGDEEQYEE
>Mature_250_residues
MLLLYQLLVWLTVLGLGLYVFASWRWEEETKKRLPIIRRLWYAWFVTGAAFTWTFYPESIFTEWNHYLIVALLFVVVDAF
VFLSAYVQRIGSNVFTIDTGQLIEANDQVLKAQQDRLKAFFRLLKSDSINVYYGGQRAYITGVREILARLADKTEIQASV
FPFMTQGDKDHLLVHFKDRTTVRATLERQDVYYGEKDKLVFIPVILQGESHVIKLSSEERLTEFDALLFASLVAIYDLLS
QGGDEEQYEE

Specific function: Has a negative effect on sporulation. It is lethal when synthesized during vegetative growth in the absence of SpoIISB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29107; Mature: 29107

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLYQLLVWLTVLGLGLYVFASWRWEEETKKRLPIIRRLWYAWFVTGAAFTWTFYPESI
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHH
FTEWNHYLIVALLFVVVDAFVFLSAYVQRIGSNVFTIDTGQLIEANDQVLKAQQDRLKAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCHHHHHHHHHHHHHH
FRLLKSDSINVYYGGQRAYITGVREILARLADKTEIQASVFPFMTQGDKDHLLVHFKDRT
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCEEEEECCCC
TVRATLERQDVYYGEKDKLVFIPVILQGESHVIKLSSEERLTEFDALLFASLVAIYDLLS
EEHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
QGGDEEQYEE
CCCCCCCCCC
>Mature Secondary Structure
MLLLYQLLVWLTVLGLGLYVFASWRWEEETKKRLPIIRRLWYAWFVTGAAFTWTFYPESI
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHH
FTEWNHYLIVALLFVVVDAFVFLSAYVQRIGSNVFTIDTGQLIEANDQVLKAQQDRLKAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCHHHHHHHHHHHHHH
FRLLKSDSINVYYGGQRAYITGVREILARLADKTEIQASVFPFMTQGDKDHLLVHFKDRT
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCEEEEECCCC
TVRATLERQDVYYGEKDKLVFIPVILQGESHVIKLSSEERLTEFDALLFASLVAIYDLLS
EEHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
QGGDEEQYEE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 11371520 [H]