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The map label for this gene is ywcH [H]

Identifier: 56963708

GI number: 56963708

Start: 2058011

End: 2059015

Strand: Direct

Name: ywcH [H]

Synonym: ABC1943

Alternate gene names: 56963708

Gene position: 2058011-2059015 (Clockwise)

Preceding gene: 56963707

Following gene: 56963709

Centisome position: 47.82

GC content: 48.86

Gene sequence:

>1005_bases
GTGATAAAACTTAGTGTCCTAGACCAAGTTCCTCGCTCCAGTGAGACAACAAATGAAATTGCCTTAAAGGAAACAGCCGA
CTTGGCTCAAGCAGCTGAAAGCATGGGCTATTTCCGTTACTGGGTGGCCGAACACCACGATTTGCATGGCTTGCTTTCGC
CAAGCCCAGAAATTTTACTAGCCTACATCGGTGCTAAAACCAACTCAATCCGCTTAGGAGCTGGAGCAATCTTGCTTCCT
CATTATGCCCCTTTTAAAGTGGCAGAGTCTTTTCACATGCTTGCCAACCTTTTTCCAGGGCGGATCGACCTTGGCTTGGG
CCGTTCGCCAGGGGGTTCGGCAGAGGCTGCGGAAGCCCTTTCTGGCAACTTTATCGAACGCATTCATACGATGGACGAGC
GTATGACGGAGCTAATGCACTTTCTGAAACGTGACTTTCCAGAAGGGCATAAATACGCTTCCTTACAAGCTGTGCCTCTT
CCTTATGAACAGCCGGCGGTGTATATGCTTGGAACGTCTAAGAAGAGCGCTGCCTTAGCGGCTAAACATAACCTCCAGTA
TGTTTATGGCCATTTTATGGATGATCAAAACGGCCAAGATGTCATTGCCCACTATCGAAAGCGTGCGAATCAGGCTACGA
AGCCAATTGTTTGTGTGTTTGTTTTATGCGCCGAATCGAACGAAAAAGCGAGGCAGCTTTACCGCTCTGTGCGGCTGTGG
CAAACAGCCAATCAACAAGGGAGGATGATGGCCGCGATCCCGACTGAAGCGGAAACGGCTTATTTTCTCACCCAATTGAA
CGAAGAAGACCGTGCTGCTGTAATGAATGTGCCATCAACCGCCATTGTGGGCGACAAACAGCATGTGAAAGAACGCATGG
ATGCCATTGCTAATTCGCTTCATGTCGATGAGTTGATGGTGTTGACGCATGCGCCTGAGCTTAGCGATCGCCTTCATTCA
TACCGGCTATTGGCTGAAATTTACCCACAACTTGTTTCCTTATAG

Upstream 100 bases:

>100_bases
AGGCAGAATGGGATCATCCATTCTGCTTTTTTGTGTTTAAGTTGCCAATCCCTATAAAATTCGATACGGTAAAGGAAGAC
TAAATGAAAGAAGGATTCTT

Downstream 100 bases:

>100_bases
GTCCCCTATAAGCGCTGCCCATGTGTCCTGGCGGCGCTTTTTCTCTTCTTCAAAAGTAGGCACCAATCCAAATTCGCGAC
ATACGTTGAAATAAACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MIKLSVLDQVPRSSETTNEIALKETADLAQAAESMGYFRYWVAEHHDLHGLLSPSPEILLAYIGAKTNSIRLGAGAILLP
HYAPFKVAESFHMLANLFPGRIDLGLGRSPGGSAEAAEALSGNFIERIHTMDERMTELMHFLKRDFPEGHKYASLQAVPL
PYEQPAVYMLGTSKKSAALAAKHNLQYVYGHFMDDQNGQDVIAHYRKRANQATKPIVCVFVLCAESNEKARQLYRSVRLW
QTANQQGRMMAAIPTEAETAYFLTQLNEEDRAAVMNVPSTAIVGDKQHVKERMDAIANSLHVDELMVLTHAPELSDRLHS
YRLLAEIYPQLVSL

Sequences:

>Translated_334_residues
MIKLSVLDQVPRSSETTNEIALKETADLAQAAESMGYFRYWVAEHHDLHGLLSPSPEILLAYIGAKTNSIRLGAGAILLP
HYAPFKVAESFHMLANLFPGRIDLGLGRSPGGSAEAAEALSGNFIERIHTMDERMTELMHFLKRDFPEGHKYASLQAVPL
PYEQPAVYMLGTSKKSAALAAKHNLQYVYGHFMDDQNGQDVIAHYRKRANQATKPIVCVFVLCAESNEKARQLYRSVRLW
QTANQQGRMMAAIPTEAETAYFLTQLNEEDRAAVMNVPSTAIVGDKQHVKERMDAIANSLHVDELMVLTHAPELSDRLHS
YRLLAEIYPQLVSL
>Mature_334_residues
MIKLSVLDQVPRSSETTNEIALKETADLAQAAESMGYFRYWVAEHHDLHGLLSPSPEILLAYIGAKTNSIRLGAGAILLP
HYAPFKVAESFHMLANLFPGRIDLGLGRSPGGSAEAAEALSGNFIERIHTMDERMTELMHFLKRDFPEGHKYASLQAVPL
PYEQPAVYMLGTSKKSAALAAKHNLQYVYGHFMDDQNGQDVIAHYRKRANQATKPIVCVFVLCAESNEKARQLYRSVRLW
QTANQQGRMMAAIPTEAETAYFLTQLNEEDRAAVMNVPSTAIVGDKQHVKERMDAIANSLHVDELMVLTHAPELSDRLHS
YRLLAEIYPQLVSL

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=338, Percent_Identity=31.6568047337278, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 37286; Mature: 37286

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSVLDQVPRSSETTNEIALKETADLAQAAESMGYFRYWVAEHHDLHGLLSPSPEILL
CEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHEEE
AYIGAKTNSIRLGAGAILLPHYAPFKVAESFHMLANLFPGRIDLGLGRSPGGSAEAAEAL
EEECCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHH
SGNFIERIHTMDERMTELMHFLKRDFPEGHKYASLQAVPLPYEQPAVYMLGTSKKSAALA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHH
AKHNLQYVYGHFMDDQNGQDVIAHYRKRANQATKPIVCVFVLCAESNEKARQLYRSVRLW
HHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
QTANQQGRMMAAIPTEAETAYFLTQLNEEDRAAVMNVPSTAIVGDKQHVKERMDAIANSL
HHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHH
HVDELMVLTHAPELSDRLHSYRLLAEIYPQLVSL
HHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKLSVLDQVPRSSETTNEIALKETADLAQAAESMGYFRYWVAEHHDLHGLLSPSPEILL
CEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHEEE
AYIGAKTNSIRLGAGAILLPHYAPFKVAESFHMLANLFPGRIDLGLGRSPGGSAEAAEAL
EEECCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHH
SGNFIERIHTMDERMTELMHFLKRDFPEGHKYASLQAVPLPYEQPAVYMLGTSKKSAALA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHH
AKHNLQYVYGHFMDDQNGQDVIAHYRKRANQATKPIVCVFVLCAESNEKARQLYRSVRLW
HHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
QTANQQGRMMAAIPTEAETAYFLTQLNEEDRAAVMNVPSTAIVGDKQHVKERMDAIANSL
HHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHH
HVDELMVLTHAPELSDRLHSYRLLAEIYPQLVSL
HHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]