| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
Click here to switch to the map view.
The map label for this gene is ilvK [H]
Identifier: 56963696
GI number: 56963696
Start: 2046246
End: 2047328
Strand: Direct
Name: ilvK [H]
Synonym: ABC1931
Alternate gene names: 56963696
Gene position: 2046246-2047328 (Clockwise)
Preceding gene: 56963694
Following gene: 56963697
Centisome position: 47.54
GC content: 43.77
Gene sequence:
>1083_bases ATGACAACACAAAAACTCGAAATTATGAAATGTACGCACAAAAAACAAAAACCCGAGTCTTCTGCTTTAGAGTTTGGCAA GTATTTTACAGACCATATGTTTATCATGGATTATTCAGAAGAGAAAGGCTGGTACAGTCCCCGTATTATTCCTTATCAAC CATTGACCCTTGATCCTGCCGCAATGGTATTCCATTATGGGCAAACGGTTTTTGAAGGCTTAAAAGCGTACCGTTCTGAA GATGGGAGCGTCCGCTTATTCCGCCCAGAAGAAAACTTTAAGCGTTTGAATCAATCAAGCGACCGTTTGAGCATCCCGCC GATTGATGAAGCACAAATGCTCGCTTATTTAAAGGAATTGATCCGTATCGATAAAGACTGGATTCCAACGATGCCAGGAA CTTCCCTTTATATTCGCCCATTTGTTATTGCGACAGAACCTACATTAGGCGTAGCGCCTTCACGTAATTATAAATTTATG ATTATCTTGTCACCAGTCGGAGCTTACTATAAAGAAGGAATCAACCCAATTGGCATTTTTGTAGAAGACCAATATACACG TGCCGCACCAGGGGGGACTGGGACCGCGAAAACGGCTGGCAACTACTGTGCTGCTTACAAAGCACAAGAGCGGGCTACAG CGAACAAACAAGCACAAGTTCTATGGTTGGACGGGATGGAAAAGAAATACGTCGAAGAAGTAGGCAGCATGAATGTGTTT TTTAAATTGAACGGAGAAGTGCATACACCTGGATTATCAGGCAGCATTTTAGAGGGCATTACACGCAAAAGCGTGATCGA GTTGCTGAAAAGTTGGGATATCCCAGTGTTCGAACGGCGGATTTCAATTGAAGAAATTGTGAGCGCAAGCAAAAGCGGTA CGCTTGAAGAAGTCTTCGGAACTGGTACAGCAGCGGTCATCTCTCCAGTCGGAGAACTTTTGTGGAAAGACCACAAAATC GTTGTCAACAACAATGAAACAGGAGCGTTGTCCAAACGTTTGTACACGGAATTGACAGGCATTCAAACTGGAGAACAAAA AGACCCGTTTGGCTGGACTGTCCGTTTGGAAGACGAGGAATAA
Upstream 100 bases:
>100_bases TCGATCAATTTCATAAAGGGTAAGCATTTTTTTGTTTGTCGTCTTGTTCCTAAACCATATCATCGATGTTACTAGAGAAA AAATGAAGGAGCGCTCGTTC
Downstream 100 bases:
>100_bases CCAAACCCGGAGGCAAGTATGATACGAGCTATTTTCTTTGATTTAGATGATACGTTATTATGGGATAAAAAAAGCATAAA GGAAGCGTTTAGGCAGACAT
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTTQKLEIMKCTHKKQKPESSALEFGKYFTDHMFIMDYSEEKGWYSPRIIPYQPLTLDPAAMVFHYGQTVFEGLKAYRSE DGSVRLFRPEENFKRLNQSSDRLSIPPIDEAQMLAYLKELIRIDKDWIPTMPGTSLYIRPFVIATEPTLGVAPSRNYKFM IILSPVGAYYKEGINPIGIFVEDQYTRAAPGGTGTAKTAGNYCAAYKAQERATANKQAQVLWLDGMEKKYVEEVGSMNVF FKLNGEVHTPGLSGSILEGITRKSVIELLKSWDIPVFERRISIEEIVSASKSGTLEEVFGTGTAAVISPVGELLWKDHKI VVNNNETGALSKRLYTELTGIQTGEQKDPFGWTVRLEDEE
Sequences:
>Translated_360_residues MTTQKLEIMKCTHKKQKPESSALEFGKYFTDHMFIMDYSEEKGWYSPRIIPYQPLTLDPAAMVFHYGQTVFEGLKAYRSE DGSVRLFRPEENFKRLNQSSDRLSIPPIDEAQMLAYLKELIRIDKDWIPTMPGTSLYIRPFVIATEPTLGVAPSRNYKFM IILSPVGAYYKEGINPIGIFVEDQYTRAAPGGTGTAKTAGNYCAAYKAQERATANKQAQVLWLDGMEKKYVEEVGSMNVF FKLNGEVHTPGLSGSILEGITRKSVIELLKSWDIPVFERRISIEEIVSASKSGTLEEVFGTGTAAVISPVGELLWKDHKI VVNNNETGALSKRLYTELTGIQTGEQKDPFGWTVRLEDEE >Mature_359_residues TTQKLEIMKCTHKKQKPESSALEFGKYFTDHMFIMDYSEEKGWYSPRIIPYQPLTLDPAAMVFHYGQTVFEGLKAYRSED GSVRLFRPEENFKRLNQSSDRLSIPPIDEAQMLAYLKELIRIDKDWIPTMPGTSLYIRPFVIATEPTLGVAPSRNYKFMI ILSPVGAYYKEGINPIGIFVEDQYTRAAPGGTGTAKTAGNYCAAYKAQERATANKQAQVLWLDGMEKKYVEEVGSMNVFF KLNGEVHTPGLSGSILEGITRKSVIELLKSWDIPVFERRISIEEIVSASKSGTLEEVFGTGTAAVISPVGELLWKDHKIV VNNNETGALSKRLYTELTGIQTGEQKDPFGWTVRLEDEE
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=361, Percent_Identity=38.781163434903, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI38176287, Length=361, Percent_Identity=38.781163434903, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI296010906, Length=361, Percent_Identity=38.781163434903, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI50658084, Length=349, Percent_Identity=40.974212034384, Blast_Score=262, Evalue=4e-70, Organism=Homo sapiens, GI296010902, Length=364, Percent_Identity=34.6153846153846, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI296010900, Length=361, Percent_Identity=34.6260387811634, Blast_Score=214, Evalue=9e-56, Organism=Homo sapiens, GI258614015, Length=284, Percent_Identity=39.7887323943662, Blast_Score=207, Evalue=9e-54, Organism=Escherichia coli, GI48994963, Length=317, Percent_Identity=30.5993690851735, Blast_Score=125, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17568601, Length=349, Percent_Identity=38.10888252149, Blast_Score=247, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17565728, Length=347, Percent_Identity=36.3112391930836, Blast_Score=207, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6322608, Length=360, Percent_Identity=40.2777777777778, Blast_Score=263, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6322002, Length=359, Percent_Identity=39.8328690807799, Blast_Score=251, Evalue=2e-67, Organism=Drosophila melanogaster, GI24641779, Length=351, Percent_Identity=39.3162393162393, Blast_Score=237, Evalue=1e-62,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 40552; Mature: 40421
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQKLEIMKCTHKKQKPESSALEFGKYFTDHMFIMDYSEEKGWYSPRIIPYQPLTLDPA CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCEECCCCCCCCCHH AMVFHYGQTVFEGLKAYRSEDGSVRLFRPEENFKRLNQSSDRLSIPPIDEAQMLAYLKEL HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH IRIDKDWIPTMPGTSLYIRPFVIATEPTLGVAPSRNYKFMIILSPVGAYYKEGINPIGIF HHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEE VEDQYTRAAPGGTGTAKTAGNYCAAYKAQERATANKQAQVLWLDGMEKKYVEEVGSMNVF EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEE FKLNGEVHTPGLSGSILEGITRKSVIELLKSWDIPVFERRISIEEIVSASKSGTLEEVFG EEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCCCHHHHHC TGTAAVISPVGELLWKDHKIVVNNNETGALSKRLYTELTGIQTGEQKDPFGWTVRLEDEE CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure TTQKLEIMKCTHKKQKPESSALEFGKYFTDHMFIMDYSEEKGWYSPRIIPYQPLTLDPA CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCEECCCCCCCCCHH AMVFHYGQTVFEGLKAYRSEDGSVRLFRPEENFKRLNQSSDRLSIPPIDEAQMLAYLKEL HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH IRIDKDWIPTMPGTSLYIRPFVIATEPTLGVAPSRNYKFMIILSPVGAYYKEGINPIGIF HHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEE VEDQYTRAAPGGTGTAKTAGNYCAAYKAQERATANKQAQVLWLDGMEKKYVEEVGSMNVF EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEE FKLNGEVHTPGLSGSILEGITRKSVIELLKSWDIPVFERRISIEEIVSASKSGTLEEVFG EEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCCCHHHHHC TGTAAVISPVGELLWKDHKIVVNNNETGALSKRLYTELTGIQTGEQKDPFGWTVRLEDEE CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]