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The map label for this gene is spoVAF [H]

Identifier: 56963565

GI number: 56963565

Start: 1915655

End: 1917136

Strand: Direct

Name: spoVAF [H]

Synonym: ABC1800

Alternate gene names: 56963565

Gene position: 1915655-1917136 (Clockwise)

Preceding gene: 56963564

Following gene: 56963566

Centisome position: 44.51

GC content: 47.64

Gene sequence:

>1482_bases
GTGAAGTCCCCGAGGAAACCGATGAACTTTAGCCATGACTTTTCTGAGAATGAAGCGATATTAAAGCAACGGCTCGGCCT
TGATCAATCCTTTGATGTTGGCGTTCGCAAGCTAAATATTTTTAATAGAGAAGTCGGCATTTATTATTTGACAGGTCTTG
TCGACAATTTATATATCATTGAAATTTTACGCGAGCTCATGGAAGTTGAAGGCAGGTTACGCCGCGTCGAACAACCGTTT
GTCACGATTAAAAATCATTTGGCCCATATCCAAGTGGAAGAAACGGAGTCAATGGACCACGCCATTACGCAAGTGCTGTC
AGGGTTAATCTTCGTCATTGTTGACGGCGAGGCAAAAGCACTTGTGGCCGATGTCCGTTCCTATCCAGGAAGGGGCCCCG
AAGAGCCGGATACAGAGCGTGTTGTCCGCGGTGCACGGGATGGCTATACGGAAAATATTATCTTTAACACGGGGTTGACC
AGGCGCCGCATTCGGGACGAGCGGCTTCGGCAAGAAATCATGCAAGTTGGCGTCCGCTCCAAAACCGATATTTGCCTTTG
TTATATAGATGGAATTGTCGACCCAGGCTTTATTAAAATCATTAAAAAAGAATTAAAAGCGATCAACATCGACGGCTTGA
CAATGGCAGACAAAGTCGTCGAGGAATACATTGTCAAACAAGGGCTTAACCCTTTTCCTTTAGTGCGTTATACTGAACGG
CCTGATGTAGCCGCTACCCATATTTTAGAAGGGCATGTCGTCATCATTGTCGACACATCGCCGTCTGTGGTCATAACGCC
GGCGACGATTTTTCACCACGTTCAGCATGCGGAAGAATACAGGCAGGCTCCAGCAGTGGGGACGTTCCTGCGCTGGATGC
GTCTAATCGGCATTTTGTTTTCCCTTTTAATTGTGCCGTTTTGGTTGCTTCTCGCCATCAATCAAGAAATGGTGCCCCCC
GCTCTTGATTTTATCGGCGTCAATGAAAATAAAAACATTCCAATTGCACTGCAAGTTATTTTTGCCGAAGCTGGCATTGA
ATTGTTGCGGATGGCCGCTATCCATACGCCTTCGCCATTAGCGACTGCACTAGGGCTAGTCGCCGCTTTGCTGATTGGCG
AAATCGCGATTGAAGTTGGTTATTTTACGTCAGAAGTGATTCTCTATGTTTCGCTTGGTGCAATCGGCATGTTTGCCACC
CCAAGCTATGAGCTCGGTGTAGCGCTTCGGATAGCACGCTACGGCTTAATTTTATCAGTCATCTTTTTGGACGGAATGGG
CTTCGTCGTCGCAATGACACTGCTGTTTTTCTCACTTGTGCGCCTTGCCCCTTTGCAGCGCCCTTACTTATGGCCATTTT
TGCCGTTTGACCCGCCGGCATTATACCAAGTATTGTGCAGGGCTTCTGTGCCAACACTCAGGTGGAGGCCAAGCATTGTC
CATCCACAAGACAAAATTAGGCAAACGCCAACAAGCGAGTAG

Upstream 100 bases:

>100_bases
ATCGGCGATATTGGCAAGATGGCACGCTTTGATGATGTCAAACGCGGAGCGCCTGTGACGAGGCAAGCGCTAGAAATGAT
TTTAGAAAGGAGTGGATACC

Downstream 100 bases:

>100_bases
CCAAACGAACATGGATTTGATACACTAATGGAAAAACGCGAAAAAGCAGCTTAGCCTTTTTGGCCGAAGTTGCTTTTTTT
AAAGGGATACAAGGGAGTGG

Product: stage V sporulation protein AF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MKSPRKPMNFSHDFSENEAILKQRLGLDQSFDVGVRKLNIFNREVGIYYLTGLVDNLYIIEILRELMEVEGRLRRVEQPF
VTIKNHLAHIQVEETESMDHAITQVLSGLIFVIVDGEAKALVADVRSYPGRGPEEPDTERVVRGARDGYTENIIFNTGLT
RRRIRDERLRQEIMQVGVRSKTDICLCYIDGIVDPGFIKIIKKELKAINIDGLTMADKVVEEYIVKQGLNPFPLVRYTER
PDVAATHILEGHVVIIVDTSPSVVITPATIFHHVQHAEEYRQAPAVGTFLRWMRLIGILFSLLIVPFWLLLAINQEMVPP
ALDFIGVNENKNIPIALQVIFAEAGIELLRMAAIHTPSPLATALGLVAALLIGEIAIEVGYFTSEVILYVSLGAIGMFAT
PSYELGVALRIARYGLILSVIFLDGMGFVVAMTLLFFSLVRLAPLQRPYLWPFLPFDPPALYQVLCRASVPTLRWRPSIV
HPQDKIRQTPTSE

Sequences:

>Translated_493_residues
MKSPRKPMNFSHDFSENEAILKQRLGLDQSFDVGVRKLNIFNREVGIYYLTGLVDNLYIIEILRELMEVEGRLRRVEQPF
VTIKNHLAHIQVEETESMDHAITQVLSGLIFVIVDGEAKALVADVRSYPGRGPEEPDTERVVRGARDGYTENIIFNTGLT
RRRIRDERLRQEIMQVGVRSKTDICLCYIDGIVDPGFIKIIKKELKAINIDGLTMADKVVEEYIVKQGLNPFPLVRYTER
PDVAATHILEGHVVIIVDTSPSVVITPATIFHHVQHAEEYRQAPAVGTFLRWMRLIGILFSLLIVPFWLLLAINQEMVPP
ALDFIGVNENKNIPIALQVIFAEAGIELLRMAAIHTPSPLATALGLVAALLIGEIAIEVGYFTSEVILYVSLGAIGMFAT
PSYELGVALRIARYGLILSVIFLDGMGFVVAMTLLFFSLVRLAPLQRPYLWPFLPFDPPALYQVLCRASVPTLRWRPSIV
HPQDKIRQTPTSE
>Mature_493_residues
MKSPRKPMNFSHDFSENEAILKQRLGLDQSFDVGVRKLNIFNREVGIYYLTGLVDNLYIIEILRELMEVEGRLRRVEQPF
VTIKNHLAHIQVEETESMDHAITQVLSGLIFVIVDGEAKALVADVRSYPGRGPEEPDTERVVRGARDGYTENIIFNTGLT
RRRIRDERLRQEIMQVGVRSKTDICLCYIDGIVDPGFIKIIKKELKAINIDGLTMADKVVEEYIVKQGLNPFPLVRYTER
PDVAATHILEGHVVIIVDTSPSVVITPATIFHHVQHAEEYRQAPAVGTFLRWMRLIGILFSLLIVPFWLLLAINQEMVPP
ALDFIGVNENKNIPIALQVIFAEAGIELLRMAAIHTPSPLATALGLVAALLIGEIAIEVGYFTSEVILYVSLGAIGMFAT
PSYELGVALRIARYGLILSVIFLDGMGFVVAMTLLFFSLVRLAPLQRPYLWPFLPFDPPALYQVLCRASVPTLRWRPSIV
HPQDKIRQTPTSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 55456; Mature: 55456

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPRKPMNFSHDFSENEAILKQRLGLDQSFDVGVRKLNIFNREVGIYYLTGLVDNLYII
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHEEEHHCCCCHHEEHHHHHHHHHHH
EILRELMEVEGRLRRVEQPFVTIKNHLAHIQVEETESMDHAITQVLSGLIFVIVDGEAKA
HHHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCEEEEEECCCHHH
LVADVRSYPGRGPEEPDTERVVRGARDGYTENIIFNTGLTRRRIRDERLRQEIMQVGVRS
HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
KTDICLCYIDGIVDPGFIKIIKKELKAINIDGLTMADKVVEEYIVKQGLNPFPLVRYTER
CCCEEEEEECCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
PDVAATHILEGHVVIIVDTSPSVVITPATIFHHVQHAEEYRQAPAVGTFLRWMRLIGILF
CCHHHHHEECCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SLLIVPFWLLLAINQEMVPPALDFIGVNENKNIPIALQVIFAEAGIELLRMAAIHTPSPL
HHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHH
ATALGLVAALLIGEIAIEVGYFTSEVILYVSLGAIGMFATPSYELGVALRIARYGLILSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
IFLDGMGFVVAMTLLFFSLVRLAPLQRPYLWPFLPFDPPALYQVLCRASVPTLRWRPSIV
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCC
HPQDKIRQTPTSE
CCHHHHCCCCCCC
>Mature Secondary Structure
MKSPRKPMNFSHDFSENEAILKQRLGLDQSFDVGVRKLNIFNREVGIYYLTGLVDNLYII
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHEEEHHCCCCHHEEHHHHHHHHHHH
EILRELMEVEGRLRRVEQPFVTIKNHLAHIQVEETESMDHAITQVLSGLIFVIVDGEAKA
HHHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCEEEEEECCCHHH
LVADVRSYPGRGPEEPDTERVVRGARDGYTENIIFNTGLTRRRIRDERLRQEIMQVGVRS
HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
KTDICLCYIDGIVDPGFIKIIKKELKAINIDGLTMADKVVEEYIVKQGLNPFPLVRYTER
CCCEEEEEECCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
PDVAATHILEGHVVIIVDTSPSVVITPATIFHHVQHAEEYRQAPAVGTFLRWMRLIGILF
CCHHHHHEECCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SLLIVPFWLLLAINQEMVPPALDFIGVNENKNIPIALQVIFAEAGIELLRMAAIHTPSPL
HHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHH
ATALGLVAALLIGEIAIEVGYFTSEVILYVSLGAIGMFATPSYELGVALRIARYGLILSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
IFLDGMGFVVAMTLLFFSLVRLAPLQRPYLWPFLPFDPPALYQVLCRASVPTLRWRPSIV
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCC
HPQDKIRQTPTSE
CCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 7934829; 1368705; 3926949 [H]