| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is zur [H]
Identifier: 56963469
GI number: 56963469
Start: 1832093
End: 1832509
Strand: Direct
Name: zur [H]
Synonym: ABC1704
Alternate gene names: 56963469
Gene position: 1832093-1832509 (Clockwise)
Preceding gene: 56963468
Following gene: 56963470
Centisome position: 42.57
GC content: 44.36
Gene sequence:
>417_bases ATGGATGTATCAACTGCACTTAATCGTCTAAAAGAAGAAGGGTATAAGTATACGGGCAAGCGGGAAGAGATGCTAAAGCT GTTTGCGGCTAACTCCCGTTATTTAAGTGCACGAGGGGTGTTGGAAGCAATGCAAGACCGCTATCCAGGACTAAGTTTCG ATACCATTTATCGGAACCTCTCCCTTTTTGCTGAGATTGGTTTGTTGGAAACGACAGAGCTGGACGGGGAAAAACGTTTT CGATTCAGTTGCGAAACGTCGGACCATCATCACCATCTTATCTGCTTAGAGTGTGGGAAAACAGAGCATTTTCACAATTG CCCAATGGACGAGTCGCTTGCAAAACGATTTCCCCATTTCCATGTTACTGGACATAAATTTGAAATATACGGCATGTGCG AACAATGCCAGCAGTAA
Upstream 100 bases:
>100_bases CGCAAAAAAGGCTTATTCTTATTCGGTAGGGGAAACACACCTAGTCAAGCTTAAAAAAATCCGTTAAACTAAAAGAAAGT CTAAAAAGAGGGTCGATTGC
Downstream 100 bases:
>100_bases AAGCTTAAGGGAGAGCCCTTAAGCTTTTTTACGTTTGGGAGGAAAGTCGTTTAAGAAATAGGCAAGCGTTGCCATGTATT CCGGCTTGTTTTAGCGCGAA
Product: Zinc uptake regulator ZurR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MDVSTALNRLKEEGYKYTGKREEMLKLFAANSRYLSARGVLEAMQDRYPGLSFDTIYRNLSLFAEIGLLETTELDGEKRF RFSCETSDHHHHLICLECGKTEHFHNCPMDESLAKRFPHFHVTGHKFEIYGMCEQCQQ
Sequences:
>Translated_138_residues MDVSTALNRLKEEGYKYTGKREEMLKLFAANSRYLSARGVLEAMQDRYPGLSFDTIYRNLSLFAEIGLLETTELDGEKRF RFSCETSDHHHHLICLECGKTEHFHNCPMDESLAKRFPHFHVTGHKFEIYGMCEQCQQ >Mature_138_residues MDVSTALNRLKEEGYKYTGKREEMLKLFAANSRYLSARGVLEAMQDRYPGLSFDTIYRNLSLFAEIGLLETTELDGEKRF RFSCETSDHHHHLICLECGKTEHFHNCPMDESLAKRFPHFHVTGHKFEIYGMCEQCQQ
Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16113; Mature: 16113
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSTALNRLKEEGYKYTGKREEMLKLFAANSRYLSARGVLEAMQDRYPGLSFDTIYRNL CCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHH SLFAEIGLLETTELDGEKRFRFSCETSDHHHHLICLECGKTEHFHNCPMDESLAKRFPHF HHHHHHCCEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCE HVTGHKFEIYGMCEQCQQ EECCCEEEEEEEHHHHCC >Mature Secondary Structure MDVSTALNRLKEEGYKYTGKREEMLKLFAANSRYLSARGVLEAMQDRYPGLSFDTIYRNL CCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHH SLFAEIGLLETTELDGEKRFRFSCETSDHHHHLICLECGKTEHFHNCPMDESLAKRFPHF HHHHHHCCEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCE HVTGHKFEIYGMCEQCQQ EECCCEEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9811636 [H]