BacMap

Definition	Bacillus clausii KSM-K16, complete genome.
Accession	NC_006582
Length	4,303,871

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The map label for this gene is cshB [H]

Identifier: 56963462

GI number: 56963462

Start: 1825306

End: 1826667

Strand: Direct

Name: cshB [H]

Synonym: ABC1697

Alternate gene names: 56963462

Gene position: 1825306-1826667 (Clockwise)

Preceding gene: 56963458

Following gene: 56963463

Centisome position: 42.41

GC content: 47.8

Gene sequence:

>1362_bases
ATGAATGCTGAACATTTTAGCCGTTTAGGTTTAAACGAGCGACTGCTCAAAGGATTGAGCGCTATTGGCGTCAAGCGGCC
AACTGAGATTCAGGAACGATTGATTCCAGCGATTTTAAATCGAAAAGATGTGATTGGCCAGTCGCAAACAGGGACAGGAA
AAACATTTGCGTTTTTGCTGCCGATCATCGAACAGCTCGATATCGAGCAAAACGAGGTACAGGCAGTGATCACTGCCCCT
ACACGAGAACTTTGCGCCCAATTATTTGATGAGTTAAAAAAGCTGATTGTCTATTATGACGGGCAAGTTGATGCGCAGCT
TTTCGTTGGCGGCACGGACAGAAAACGGCAAGCACAGCGGTTGTCCACTAAGCAACCGCACATTGTCATCGGCACGCCAG
GCCGGATTGCTGACCTTGTCAATACATCTTCCTTGCTTGTATATACGGCTAAGACGCTTGTTGTTGACGAAGCGGATCAG
ATGCTTGATATGGGCTTTTTAGAAGACGTGGACAAGGTTGCCGGAAGGTTAGCCGAGGACCTGCAAATGCTTGTCTTTTC
GGCAACCGTTCCTGAAAAGCTGCAACCATTTTTAAAAAAATATATGAATAACCCACGGCATGTTCATGTTCAACCAGAAA
AGCTGGCGGCAGAGCGTGTTACCCACCAGCTTGTTCCAGTGCGCCACCGGGACAAGTTGACTGTGTTGAAAGAGACTATT
CGCGGCTTAAACCCGTATTTGGCGATCATCTTTACCAATACAAAAGAGCAAGCCGACGAAGTGACAGCAGCTTTAGCTAC
TGAGGATATACTTGTTGATTGCCTCCATGGTGGCCTGGCACCGCGGGAACGCAAAAAAGTAATGAAACGGGTTGAGGATT
TATCAATCCAGTATTTGGTTGCAACCGATTTGGCTGCGCGAGGCATTGACATTAAAGGCGTGACACACATCATCAATTAC
GCGTTTCCACAAGACTTGGATTTTTATGTCCATCGTGTCGGTCGGACAGCGCGGGCTGGCGCAGACGGCATTGCCTTGTC
GCTGTATGAGCAAAGTGATGAAGCGGCGTGTGCGAAGCTTGCCAGTCGGGGGATTGTTTTTTCATTTGTGGAATTCAAAG
ATGGTGAATGGACAGAGCTCGTTAAGCCTCCTGTGGGAGCGGGTCGGATCAATCGAAAGCAACCAACAGACAAAGGGAAA
GCTACTGTTGAAAAGCAAACAGGTAATCGGCCCATTCGGACCGGCGGCAAGGCAAAAGCTAGGCCTAAAAAAGTAAAGCC
TGGGTATAAACAAAAAGCGAAAGCCGCTATTGCCAAACAGAAAAAACGGGAGAGACGCTTAAACGCGCGTAAAGAGAAAT
AA

Upstream 100 bases:

>100_bases
CAGCAGTCGTATAAATCGTGTCTTTAAATGCAAATGGACGAATTACATGCCAGTGTGGTAAAATGAAGTATTGCAATCGA
ACGGAAAGTAGGAGTTAAAA

Downstream 100 bases:

>100_bases
TACGGAGGGAGATTTCATGTCATTGTTAATTGGTTCCCATGTGTCGATGAGCGGAAAGAAAATGTTGCTGCAATCGAGTG
AGGAAGCAGCCTCTTACGGT

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MNAEHFSRLGLNERLLKGLSAIGVKRPTEIQERLIPAILNRKDVIGQSQTGTGKTFAFLLPIIEQLDIEQNEVQAVITAP
TRELCAQLFDELKKLIVYYDGQVDAQLFVGGTDRKRQAQRLSTKQPHIVIGTPGRIADLVNTSSLLVYTAKTLVVDEADQ
MLDMGFLEDVDKVAGRLAEDLQMLVFSATVPEKLQPFLKKYMNNPRHVHVQPEKLAAERVTHQLVPVRHRDKLTVLKETI
RGLNPYLAIIFTNTKEQADEVTAALATEDILVDCLHGGLAPRERKKVMKRVEDLSIQYLVATDLAARGIDIKGVTHIINY
AFPQDLDFYVHRVGRTARAGADGIALSLYEQSDEAACAKLASRGIVFSFVEFKDGEWTELVKPPVGAGRINRKQPTDKGK
ATVEKQTGNRPIRTGGKAKARPKKVKPGYKQKAKAAIAKQKKRERRLNARKEK

Sequences:

>Translated_453_residues
MNAEHFSRLGLNERLLKGLSAIGVKRPTEIQERLIPAILNRKDVIGQSQTGTGKTFAFLLPIIEQLDIEQNEVQAVITAP
TRELCAQLFDELKKLIVYYDGQVDAQLFVGGTDRKRQAQRLSTKQPHIVIGTPGRIADLVNTSSLLVYTAKTLVVDEADQ
MLDMGFLEDVDKVAGRLAEDLQMLVFSATVPEKLQPFLKKYMNNPRHVHVQPEKLAAERVTHQLVPVRHRDKLTVLKETI
RGLNPYLAIIFTNTKEQADEVTAALATEDILVDCLHGGLAPRERKKVMKRVEDLSIQYLVATDLAARGIDIKGVTHIINY
AFPQDLDFYVHRVGRTARAGADGIALSLYEQSDEAACAKLASRGIVFSFVEFKDGEWTELVKPPVGAGRINRKQPTDKGK
ATVEKQTGNRPIRTGGKAKARPKKVKPGYKQKAKAAIAKQKKRERRLNARKEK
>Mature_453_residues
MNAEHFSRLGLNERLLKGLSAIGVKRPTEIQERLIPAILNRKDVIGQSQTGTGKTFAFLLPIIEQLDIEQNEVQAVITAP
TRELCAQLFDELKKLIVYYDGQVDAQLFVGGTDRKRQAQRLSTKQPHIVIGTPGRIADLVNTSSLLVYTAKTLVVDEADQ
MLDMGFLEDVDKVAGRLAEDLQMLVFSATVPEKLQPFLKKYMNNPRHVHVQPEKLAAERVTHQLVPVRHRDKLTVLKETI
RGLNPYLAIIFTNTKEQADEVTAALATEDILVDCLHGGLAPRERKKVMKRVEDLSIQYLVATDLAARGIDIKGVTHIINY
AFPQDLDFYVHRVGRTARAGADGIALSLYEQSDEAACAKLASRGIVFSFVEFKDGEWTELVKPPVGAGRINRKQPTDKGK
ATVEKQTGNRPIRTGGKAKARPKKVKPGYKQKAKAAIAKQKKRERRLNARKEK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=349, Percent_Identity=37.2492836676218, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI83700235, Length=352, Percent_Identity=36.6477272727273, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=34.9431818181818, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI224593278, Length=350, Percent_Identity=35.4285714285714, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI222352149, Length=354, Percent_Identity=32.2033898305085, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI164664518, Length=348, Percent_Identity=31.0344827586207, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=31.3829787234043, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=31.3829787234043, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI164419743, Length=347, Percent_Identity=34.5821325648415, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI51094101, Length=347, Percent_Identity=34.5821325648415, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI301171467, Length=374, Percent_Identity=31.283422459893, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI87196351, Length=374, Percent_Identity=31.283422459893, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI301171475, Length=374, Percent_Identity=31.283422459893, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI55749865, Length=354, Percent_Identity=32.2033898305085, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=33.7912087912088, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=33.7912087912088, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=33.7047353760446, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=33.7047353760446, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=33.7047353760446, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=33.7047353760446, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI20149629, Length=349, Percent_Identity=33.5243553008596, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI21071032, Length=372, Percent_Identity=31.7204301075269, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI31542656, Length=356, Percent_Identity=34.2696629213483, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=33.5227272727273, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=30.2521008403361, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=32.9815303430079, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI256223453, Length=358, Percent_Identity=30.7262569832402, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI41327771, Length=388, Percent_Identity=31.4432989690722, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI13129006, Length=362, Percent_Identity=33.1491712707182, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=29.6918767507003, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=29.6918767507003, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI13514831, Length=369, Percent_Identity=31.7073170731707, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI148613856, Length=335, Percent_Identity=32.5373134328358, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI38201710, Length=335, Percent_Identity=32.5373134328358, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI4758138, Length=347, Percent_Identity=30.835734870317, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI188035877, Length=363, Percent_Identity=30.0275482093664, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI164419732, Length=347, Percent_Identity=31.4121037463977, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI41327776, Length=349, Percent_Identity=31.5186246418338, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI6005743, Length=356, Percent_Identity=30.6179775280899, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI38569505, Length=361, Percent_Identity=31.3019390581717, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI38569503, Length=361, Percent_Identity=31.3019390581717, Blast_Score=158, Evalue=8e-39,
Organism=Homo sapiens, GI8922886, Length=360, Percent_Identity=30, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI41327779, Length=371, Percent_Identity=29.1105121293801, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI17505907, Length=429, Percent_Identity=27.5058275058275, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI38327634, Length=341, Percent_Identity=31.0850439882698, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI62241022, Length=340, Percent_Identity=30, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=28.2115869017632, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI62241024, Length=318, Percent_Identity=29.559748427673, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI4826686, Length=352, Percent_Identity=28.6931818181818, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI154759257, Length=406, Percent_Identity=28.3251231527094, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI9966805, Length=309, Percent_Identity=27.5080906148867, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI256773275, Length=381, Percent_Identity=27.2965879265092, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=31.0185185185185, Blast_Score=106, Evalue=5e-23,
Organism=Escherichia coli, GI87082221, Length=348, Percent_Identity=35.9195402298851, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI1787016, Length=349, Percent_Identity=34.9570200573066, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=34.733893557423, Blast_Score=199, Evalue=4e-52,
Organism=Escherichia coli, GI1787605, Length=410, Percent_Identity=32.6829268292683, Blast_Score=198, Evalue=6e-52,
Organism=Escherichia coli, GI1788930, Length=394, Percent_Identity=33.502538071066, Blast_Score=183, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71995724, Length=349, Percent_Identity=35.8166189111748, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17507121, Length=349, Percent_Identity=35.5300859598854, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71987143, Length=352, Percent_Identity=34.9431818181818, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17537549, Length=364, Percent_Identity=34.3406593406593, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17552114, Length=353, Percent_Identity=33.9943342776204, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17510307, Length=375, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17510309, Length=375, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI71995514, Length=375, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=9e-49,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=34.733893557423, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17507945, Length=351, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=30.812324929972, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17555296, Length=359, Percent_Identity=33.1476323119777, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI71995718, Length=377, Percent_Identity=32.3607427055703, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=34.2696629213483, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=31.2138728323699, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=31.2138728323699, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI32565321, Length=396, Percent_Identity=31.8181818181818, Blast_Score=178, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI115533224, Length=345, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17510559, Length=374, Percent_Identity=30.4812834224599, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI115532546, Length=366, Percent_Identity=30.8743169398907, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI115532548, Length=366, Percent_Identity=30.8743169398907, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17507879, Length=375, Percent_Identity=30.6666666666667, Blast_Score=168, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI193206561, Length=364, Percent_Identity=29.9450549450549, Blast_Score=168, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI17507877, Length=375, Percent_Identity=30.9333333333333, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17509811, Length=370, Percent_Identity=30, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=28.7323943661972, Blast_Score=161, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=31.0880829015544, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17507881, Length=380, Percent_Identity=28.4210526315789, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32564046, Length=370, Percent_Identity=31.6216216216216, Blast_Score=155, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI71990816, Length=370, Percent_Identity=31.6216216216216, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17505370, Length=342, Percent_Identity=33.9181286549708, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17508543, Length=373, Percent_Identity=29.4906166219839, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17536099, Length=373, Percent_Identity=29.4906166219839, Blast_Score=144, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI17536101, Length=374, Percent_Identity=29.4117647058824, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17536103, Length=374, Percent_Identity=29.4117647058824, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI25148203, Length=407, Percent_Identity=26.5356265356265, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI193208216, Length=387, Percent_Identity=31.5245478036176, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17556951, Length=328, Percent_Identity=27.7439024390244, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71982862, Length=209, Percent_Identity=32.0574162679426, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI25148291, Length=373, Percent_Identity=26.5415549597855, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=359, Percent_Identity=27.2980501392758, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17565430, Length=390, Percent_Identity=24.8717948717949, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71987152, Length=91, Percent_Identity=36.2637362637363, Blast_Score=75, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=36.1111111111111, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6324217, Length=366, Percent_Identity=34.6994535519126, Blast_Score=215, Evalue=9e-57,
Organism=Saccharomyces cerevisiae, GI6320224, Length=356, Percent_Identity=32.3033707865169, Blast_Score=212, Evalue=8e-56,
Organism=Saccharomyces cerevisiae, GI6324778, Length=371, Percent_Identity=33.4231805929919, Blast_Score=203, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6325138, Length=371, Percent_Identity=32.3450134770889, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6321856, Length=358, Percent_Identity=36.8715083798883, Blast_Score=196, Evalue=9e-51,
Organism=Saccharomyces cerevisiae, GI6321360, Length=367, Percent_Identity=34.0599455040872, Blast_Score=189, Evalue=9e-49,
Organism=Saccharomyces cerevisiae, GI6320041, Length=357, Percent_Identity=31.3725490196078, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6322912, Length=356, Percent_Identity=33.4269662921348, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6322323, Length=356, Percent_Identity=33.4269662921348, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6320119, Length=363, Percent_Identity=31.404958677686, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6324620, Length=357, Percent_Identity=31.9327731092437, Blast_Score=180, Evalue=5e-46,
Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=29.6296296296296, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6322427, Length=384, Percent_Identity=33.8541666666667, Blast_Score=169, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=366, Percent_Identity=31.9672131147541, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=361, Percent_Identity=31.8559556786704, Blast_Score=163, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6320400, Length=376, Percent_Identity=32.1808510638298, Blast_Score=163, Evalue=7e-41,
Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=30.7262569832402, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6323947, Length=354, Percent_Identity=31.9209039548023, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6319618, Length=416, Percent_Identity=29.0865384615385, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6321111, Length=359, Percent_Identity=29.5264623955432, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6319714, Length=368, Percent_Identity=29.0760869565217, Blast_Score=149, Evalue=7e-37,
Organism=Saccharomyces cerevisiae, GI6323306, Length=315, Percent_Identity=29.5238095238095, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6322876, Length=432, Percent_Identity=26.6203703703704, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6324366, Length=361, Percent_Identity=26.8698060941828, Blast_Score=106, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24645031, Length=351, Percent_Identity=35.3276353276353, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI21355075, Length=355, Percent_Identity=35.2112676056338, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24584399, Length=369, Percent_Identity=34.6883468834688, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24582080, Length=351, Percent_Identity=35.042735042735, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24582078, Length=351, Percent_Identity=35.042735042735, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI17136248, Length=351, Percent_Identity=35.042735042735, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24582075, Length=351, Percent_Identity=35.042735042735, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI17985987, Length=386, Percent_Identity=31.8652849740933, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI21356161, Length=352, Percent_Identity=34.6590909090909, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI17136814, Length=357, Percent_Identity=36.6946778711485, Blast_Score=195, Evalue=5e-50,
Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=33.5149863760218, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24583281, Length=348, Percent_Identity=33.3333333333333, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24583279, Length=348, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24584994, Length=389, Percent_Identity=33.4190231362468, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=31.9209039548023, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28574962, Length=359, Percent_Identity=32.033426183844, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24585582, Length=351, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=3e-46,
Organism=Drosophila melanogaster, GI24662330, Length=366, Percent_Identity=30.8743169398907, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24644483, Length=363, Percent_Identity=29.7520661157025, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24644479, Length=363, Percent_Identity=29.7520661157025, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI281361218, Length=363, Percent_Identity=29.7520661157025, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24644481, Length=363, Percent_Identity=29.7520661157025, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24642151, Length=358, Percent_Identity=32.122905027933, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24644487, Length=363, Percent_Identity=29.7520661157025, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI45551833, Length=363, Percent_Identity=29.7520661157025, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24644485, Length=363, Percent_Identity=29.7520661157025, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=29.608938547486, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=29.608938547486, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=29.608938547486, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI18857967, Length=371, Percent_Identity=28.3018867924528, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI17647335, Length=387, Percent_Identity=32.0413436692506, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24666101, Length=450, Percent_Identity=27.5555555555556, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI28571808, Length=348, Percent_Identity=29.5977011494253, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI28571809, Length=348, Percent_Identity=29.5977011494253, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=30.4, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI18859659, Length=431, Percent_Identity=28.7703016241299, Blast_Score=148, Evalue=7e-36,
Organism=Drosophila melanogaster, GI28571338, Length=431, Percent_Identity=28.7703016241299, Blast_Score=148, Evalue=7e-36,
Organism=Drosophila melanogaster, GI24643725, Length=382, Percent_Identity=29.0575916230367, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=30.7936507936508, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=29.1338582677165, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=29.5731707317073, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI20130173, Length=455, Percent_Identity=27.6923076923077, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI19920478, Length=353, Percent_Identity=26.3456090651558, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17136666, Length=424, Percent_Identity=26.4150943396226, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24640164, Length=390, Percent_Identity=21.5384615384615, Blast_Score=93, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 50547; Mature: 50547

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEHFSRLGLNERLLKGLSAIGVKRPTEIQERLIPAILNRKDVIGQSQTGTGKTFAFLL
CCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHH
PIIEQLDIEQNEVQAVITAPTRELCAQLFDELKKLIVYYDGQVDAQLFVGGTDRKRQAQR
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCHHHHHHH
LSTKQPHIVIGTPGRIADLVNTSSLLVYTAKTLVVDEADQMLDMGFLEDVDKVAGRLAED
HCCCCCEEEEECCCHHHHHHCCCCEEEEEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHH
LQMLVFSATVPEKLQPFLKKYMNNPRHVHVQPEKLAAERVTHQLVPVRHRDKLTVLKETI
HHHHHHHCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
RGLNPYLAIIFTNTKEQADEVTAALATEDILVDCLHGGLAPRERKKVMKRVEDLSIQYLV
HCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEE
ATDLAARGIDIKGVTHIINYAFPQDLDFYVHRVGRTARAGADGIALSLYEQSDEAACAKL
EHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHCCCCCCEEEEEECCCCHHHHHHH
ASRGIVFSFVEFKDGEWTELVKPPVGAGRINRKQPTDKGKATVEKQTGNRPIRTGGKAKA
HHCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
RPKKVKPGYKQKAKAAIAKQKKRERRLNARKEK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNAEHFSRLGLNERLLKGLSAIGVKRPTEIQERLIPAILNRKDVIGQSQTGTGKTFAFLL
CCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHH
PIIEQLDIEQNEVQAVITAPTRELCAQLFDELKKLIVYYDGQVDAQLFVGGTDRKRQAQR
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCHHHHHHH
LSTKQPHIVIGTPGRIADLVNTSSLLVYTAKTLVVDEADQMLDMGFLEDVDKVAGRLAED
HCCCCCEEEEECCCHHHHHHCCCCEEEEEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHH
LQMLVFSATVPEKLQPFLKKYMNNPRHVHVQPEKLAAERVTHQLVPVRHRDKLTVLKETI
HHHHHHHCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
RGLNPYLAIIFTNTKEQADEVTAALATEDILVDCLHGGLAPRERKKVMKRVEDLSIQYLV
HCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEE
ATDLAARGIDIKGVTHIINYAFPQDLDFYVHRVGRTARAGADGIALSLYEQSDEAACAKL
EHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHCCCCCCEEEEEECCCCHHHHHHH
ASRGIVFSFVEFKDGEWTELVKPPVGAGRINRKQPTDKGKATVEKQTGNRPIRTGGKAKA
HHCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
RPKKVKPGYKQKAKAAIAKQKKRERRLNARKEK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]